Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SHROOM1Q2M3G4 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SHROOM1Q2M3G4 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SHROOM1Q2M3G4 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.55□□□□□ -1.84
SHROOM1Q2M3G4 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.55□□□□□ -1.84
SHROOM1Q2M3G4 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
SHROOM1Q2M3G4 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.55□□□□□ -1.84
SHROOM1Q2M3G4 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.55□□□□□ -1.84
SHROOM1Q2M3G4 MIR184-201ENST00000384962 84 ntBASIC3.55□□□□□ -1.84
SHROOM1Q2M3G4 FCF1P2-201ENST00000415284 583 ntBASIC3.55□□□□□ -1.84
SHROOM1Q2M3G4 MTND4P3-201ENST00000417829 541 ntBASIC3.55□□□□□ -1.84
SHROOM1Q2M3G4 TOMM22P1-201ENST00000418578 312 ntBASIC3.55□□□□□ -1.84
SHROOM1Q2M3G4 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.55□□□□□ -1.84
SHROOM1Q2M3G4 RPS15AP6-201ENST00000420703 385 ntBASIC3.55□□□□□ -1.84
SHROOM1Q2M3G4 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.55□□□□□ -1.84
SHROOM1Q2M3G4 MTCYBP34-201ENST00000439552 670 ntBASIC3.55□□□□□ -1.84
SHROOM1Q2M3G4 MTCYBP42-201ENST00000444653 1130 ntBASIC3.55□□□□□ -1.84
SHROOM1Q2M3G4 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.55□□□□□ -1.84
SHROOM1Q2M3G4 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.55□□□□□ -1.84
SHROOM1Q2M3G4 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.55□□□□□ -1.84
SHROOM1Q2M3G4 RN7SL20P-201ENST00000488827 297 ntBASIC3.55□□□□□ -1.84
SHROOM1Q2M3G4 OR2A20P-203ENST00000498397 1268 ntBASIC3.55□□□□□ -1.84
SHROOM1Q2M3G4 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.55□□□□□ -1.84
SHROOM1Q2M3G4 AC004062.1-201ENST00000509926 645 ntBASIC3.55□□□□□ -1.84
SHROOM1Q2M3G4 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SHROOM1Q2M3G4 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.55□□□□□ -1.84
SHROOM1Q2M3G4 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.55□□□□□ -1.84
SHROOM1Q2M3G4 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.55□□□□□ -1.84
SHROOM1Q2M3G4 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.55□□□□□ -1.84
SHROOM1Q2M3G4 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.55□□□□□ -1.84
SHROOM1Q2M3G4 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.55□□□□□ -1.84
SHROOM1Q2M3G4 AC112220.2-201ENST00000605513 533 ntBASIC3.55□□□□□ -1.84
SHROOM1Q2M3G4 AC009237.15-201ENST00000610252 501 ntBASIC3.55□□□□□ -1.84
SHROOM1Q2M3G4 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SHROOM1Q2M3G4 AC068722.2-201ENST00000618734 544 ntBASIC3.55□□□□□ -1.84
SHROOM1Q2M3G4 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.55□□□□□ -1.84
SHROOM1Q2M3G4 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.55□□□□□ -1.84
SHROOM1Q2M3G4 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SHROOM1Q2M3G4 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
SHROOM1Q2M3G4 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.55□□□□□ -1.84
SHROOM1Q2M3G4 FAM35CP-201ENST00000554755 2470 ntBASIC3.54□□□□□ -1.84
SHROOM1Q2M3G4 AC090740.1-201ENST00000623193 2262 ntBASIC3.54□□□□□ -1.84
SHROOM1Q2M3G4 MTND5P24-201ENST00000438892 1767 ntBASIC3.54□□□□□ -1.84
SHROOM1Q2M3G4 RNU6-921P-201ENST00000384361 107 ntBASIC3.54□□□□□ -1.84
SHROOM1Q2M3G4 UBE2V1P2-201ENST00000397758 440 ntBASIC3.54□□□□□ -1.84
SHROOM1Q2M3G4 AL139098.1-201ENST00000407291 389 ntBASIC3.54□□□□□ -1.84
SHROOM1Q2M3G4 AC233981.1-201ENST00000423224 461 ntBASIC3.54□□□□□ -1.84
SHROOM1Q2M3G4 RAC1P8-201ENST00000427086 527 ntBASIC3.54□□□□□ -1.84
SHROOM1Q2M3G4 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
SHROOM1Q2M3G4 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.54□□□□□ -1.84
SHROOM1Q2M3G4 RPS12P18-201ENST00000442381 270 ntBASIC3.54□□□□□ -1.84
SHROOM1Q2M3G4 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.54□□□□□ -1.84
SHROOM1Q2M3G4 GAPDHP39-201ENST00000481866 979 ntBASIC3.54□□□□□ -1.84
SHROOM1Q2M3G4 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SHROOM1Q2M3G4 AC108078.3-201ENST00000502633 489 ntBASIC3.54□□□□□ -1.84
SHROOM1Q2M3G4 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.54□□□□□ -1.84
SHROOM1Q2M3G4 RNA5SP356-201ENST00000515972 94 ntBASIC3.54□□□□□ -1.84
SHROOM1Q2M3G4 AC010376.1-201ENST00000522101 334 ntBASIC3.54□□□□□ -1.84
SHROOM1Q2M3G4 AC079600.2-201ENST00000550076 130 ntBASIC3.54□□□□□ -1.84
SHROOM1Q2M3G4 GTF3AP2-201ENST00000557014 266 ntBASIC3.54□□□□□ -1.84
SHROOM1Q2M3G4 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.54□□□□□ -1.84
SHROOM1Q2M3G4 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.54□□□□□ -1.84
SHROOM1Q2M3G4 AC006504.3-201ENST00000586818 523 ntBASIC3.54□□□□□ -1.84
SHROOM1Q2M3G4 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.54□□□□□ -1.84
SHROOM1Q2M3G4 GAS5-AS1-201ENST00000602767 694 ntBASIC3.54□□□□□ -1.84
SHROOM1Q2M3G4 AP003973.1-201ENST00000604639 691 ntBASIC3.54□□□□□ -1.84
SHROOM1Q2M3G4 AC002076.2-201ENST00000617362 122 ntBASIC3.54□□□□□ -1.84
SHROOM1Q2M3G4 AC005858.4-201ENST00000623191 700 ntBASIC3.54□□□□□ -1.84
SHROOM1Q2M3G4 AC099654.9-201ENST00000637055 678 ntBASIC3.54□□□□□ -1.84
SHROOM1Q2M3G4 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.54□□□□□ -1.84
SHROOM1Q2M3G4 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SHROOM1Q2M3G4 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SHROOM1Q2M3G4 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.54□□□□□ -1.84
SHROOM1Q2M3G4 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.54□□□□□ -1.84
SHROOM1Q2M3G4 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.53□□□□□ -1.84
SHROOM1Q2M3G4 MTND5P31-201ENST00000419366 1374 ntBASIC3.53□□□□□ -1.84
SHROOM1Q2M3G4 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SHROOM1Q2M3G4 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.53□□□□□ -1.84
SHROOM1Q2M3G4 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.53□□□□□ -1.84
SHROOM1Q2M3G4 RNU6-839P-201ENST00000363347 108 ntBASIC3.53□□□□□ -1.84
SHROOM1Q2M3G4 RNU6-236P-201ENST00000363886 106 ntBASIC3.53□□□□□ -1.84
SHROOM1Q2M3G4 RNU6-115P-201ENST00000364310 107 ntBASIC3.53□□□□□ -1.84
SHROOM1Q2M3G4 RNVU1-3-201ENST00000364313 161 ntBASIC3.53□□□□□ -1.84
SHROOM1Q2M3G4 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
SHROOM1Q2M3G4 RNU6-339P-201ENST00000384310 107 ntBASIC3.53□□□□□ -1.84
SHROOM1Q2M3G4 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
SHROOM1Q2M3G4 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
SHROOM1Q2M3G4 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.84
SHROOM1Q2M3G4 GTF2IP3-201ENST00000433887 494 ntBASIC3.53□□□□□ -1.84
SHROOM1Q2M3G4 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
SHROOM1Q2M3G4 AC093155.1-201ENST00000440164 826 ntBASIC3.53□□□□□ -1.84
SHROOM1Q2M3G4 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.53□□□□□ -1.84
SHROOM1Q2M3G4 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.53□□□□□ -1.84
SHROOM1Q2M3G4 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.53□□□□□ -1.84
SHROOM1Q2M3G4 AC010401.1-201ENST00000463867 348 ntBASIC3.53□□□□□ -1.84
SHROOM1Q2M3G4 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SHROOM1Q2M3G4 AC084024.2-201ENST00000503480 791 ntBASIC3.53□□□□□ -1.84
SHROOM1Q2M3G4 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SHROOM1Q2M3G4 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.53□□□□□ -1.84
SHROOM1Q2M3G4 LRRC6P1-201ENST00000532188 885 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms