Protein–RNA interactions for Protein: Q09161

NCBP1, Nuclear cap-binding protein subunit 1, humanhuman

Known RBP Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP1Q09161 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.28□□□□□ -1.88
NCBP1Q09161 MTCO3P2-201ENST00000457365 171 ntBASIC3.28□□□□□ -1.88
NCBP1Q09161 AC010301.1-201ENST00000473936 355 ntBASIC3.28□□□□□ -1.88
NCBP1Q09161 RPL23AP11-201ENST00000475260 469 ntBASIC3.28□□□□□ -1.88
NCBP1Q09161 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.28□□□□□ -1.88
NCBP1Q09161 AC080014.1-201ENST00000496877 1201 ntBASIC3.28□□□□□ -1.88
NCBP1Q09161 AC084024.2-201ENST00000503480 791 ntBASIC3.28□□□□□ -1.88
NCBP1Q09161 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.28□□□□□ -1.88
NCBP1Q09161 AC111000.2-201ENST00000507775 550 ntBASIC3.28□□□□□ -1.88
NCBP1Q09161 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NCBP1Q09161 AC010374.2-201ENST00000512933 535 ntBASIC3.28□□□□□ -1.88
NCBP1Q09161 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.28□□□□□ -1.88
NCBP1Q09161 ZNF705CP-201ENST00000530515 889 ntBASIC3.28□□□□□ -1.88
NCBP1Q09161 AP000857.1-201ENST00000532151 543 ntBASIC3.28□□□□□ -1.88
NCBP1Q09161 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.28□□□□□ -1.88
NCBP1Q09161 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC3.28□□□□□ -1.88
NCBP1Q09161 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.28□□□□□ -1.88
NCBP1Q09161 AC093510.2-201ENST00000562820 896 ntBASIC3.28□□□□□ -1.88
NCBP1Q09161 AC106782.4-201ENST00000568264 210 ntBASIC3.28□□□□□ -1.88
NCBP1Q09161 AC006504.3-201ENST00000586818 523 ntBASIC3.28□□□□□ -1.88
NCBP1Q09161 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.28□□□□□ -1.88
NCBP1Q09161 VN1R74P-201ENST00000613259 503 ntBASIC3.28□□□□□ -1.88
NCBP1Q09161 AC092650.2-201ENST00000619984 902 ntBASIC3.28□□□□□ -1.88
NCBP1Q09161 AC009318.4-201ENST00000620496 486 ntBASIC3.28□□□□□ -1.88
NCBP1Q09161 AC006386.2-201ENST00000624491 75 ntBASIC3.28□□□□□ -1.88
NCBP1Q09161 AC012005.1-201ENST00000624575 75 ntBASIC3.28□□□□□ -1.88
NCBP1Q09161 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.28□□□□□ -1.88
NCBP1Q09161 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NCBP1Q09161 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
NCBP1Q09161 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.27□□□□□ -1.89
NCBP1Q09161 RNU6-712P-201ENST00000410558 100 ntBASIC3.27□□□□□ -1.89
NCBP1Q09161 AL136133.1-201ENST00000413694 376 ntBASIC3.27□□□□□ -1.89
NCBP1Q09161 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.27□□□□□ -1.89
NCBP1Q09161 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.27□□□□□ -1.89
NCBP1Q09161 AC000041.1-201ENST00000439655 175 ntBASIC3.27□□□□□ -1.89
NCBP1Q09161 RPS20P24-201ENST00000457473 361 ntBASIC3.27□□□□□ -1.89
NCBP1Q09161 AC117440.1-201ENST00000474107 571 ntBASIC3.27□□□□□ -1.89
NCBP1Q09161 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.27□□□□□ -1.89
NCBP1Q09161 AC097462.2-201ENST00000504623 481 ntBASIC3.27□□□□□ -1.89
NCBP1Q09161 AC091860.1-201ENST00000505723 432 ntBASIC3.27□□□□□ -1.89
NCBP1Q09161 AC008628.1-201ENST00000508663 265 ntBASIC3.27□□□□□ -1.89
NCBP1Q09161 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.27□□□□□ -1.89
NCBP1Q09161 RNA5SP468-201ENST00000516782 93 ntBASIC3.27□□□□□ -1.89
NCBP1Q09161 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.27□□□□□ -1.89
NCBP1Q09161 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.27□□□□□ -1.89
NCBP1Q09161 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.27□□□□□ -1.89
NCBP1Q09161 OR4P1P-201ENST00000530808 1136 ntBASIC3.27□□□□□ -1.89
NCBP1Q09161 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.27□□□□□ -1.89
NCBP1Q09161 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.27□□□□□ -1.89
NCBP1Q09161 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.27□□□□□ -1.89
NCBP1Q09161 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.27□□□□□ -1.89
NCBP1Q09161 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.27□□□□□ -1.89
NCBP1Q09161 ZNF971P-201ENST00000562068 1249 ntBASIC3.27□□□□□ -1.89
NCBP1Q09161 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.27□□□□□ -1.89
NCBP1Q09161 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC3.27□□□□□ -1.89
NCBP1Q09161 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.27□□□□□ -1.89
NCBP1Q09161 AP000787.2-201ENST00000604432 568 ntBASIC3.27□□□□□ -1.89
NCBP1Q09161 MIR7106-201ENST00000612419 65 ntBASIC3.27□□□□□ -1.89
NCBP1Q09161 AC078880.5-201ENST00000617845 421 ntBASIC3.27□□□□□ -1.89
NCBP1Q09161 AC139713.2-210ENST00000641741 992 ntBASIC3.27□□□□□ -1.89
NCBP1Q09161 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NCBP1Q09161 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
NCBP1Q09161 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
NCBP1Q09161 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.26□□□□□ -1.89
NCBP1Q09161 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
NCBP1Q09161 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
NCBP1Q09161 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.26□□□□□ -1.89
NCBP1Q09161 AC092638.1-201ENST00000411966 1275 ntBASIC3.26□□□□□ -1.89
NCBP1Q09161 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NCBP1Q09161 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.26□□□□□ -1.89
NCBP1Q09161 AL512637.2-201ENST00000431287 1256 ntBASIC3.26□□□□□ -1.89
NCBP1Q09161 RPL36AP6-201ENST00000435770 321 ntBASIC3.26□□□□□ -1.89
NCBP1Q09161 RPS17P11-201ENST00000474297 293 ntBASIC3.26□□□□□ -1.89
NCBP1Q09161 VPS26AP1-201ENST00000483197 979 ntBASIC3.26□□□□□ -1.89
NCBP1Q09161 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC3.26□□□□□ -1.89
NCBP1Q09161 AC098799.1-201ENST00000504752 800 ntBASIC3.26□□□□□ -1.89
NCBP1Q09161 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.26□□□□□ -1.89
NCBP1Q09161 RNU1-61P-201ENST00000516107 151 ntBASIC3.26□□□□□ -1.89
NCBP1Q09161 SCARNA13-201ENST00000516672 275 ntBASIC3.26□□□□□ -1.89
NCBP1Q09161 RNA5SP135-201ENST00000517019 125 ntBASIC3.26□□□□□ -1.89
NCBP1Q09161 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NCBP1Q09161 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
NCBP1Q09161 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NCBP1Q09161 EIF4BP1-201ENST00000554881 351 ntBASIC3.26□□□□□ -1.89
NCBP1Q09161 AL109653.1-201ENST00000603091 248 ntBASIC3.26□□□□□ -1.89
NCBP1Q09161 AC131902.3-201ENST00000611767 581 ntBASIC3.26□□□□□ -1.89
NCBP1Q09161 AL020991.1-201ENST00000612314 373 ntBASIC3.26□□□□□ -1.89
NCBP1Q09161 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.26□□□□□ -1.89
NCBP1Q09161 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
NCBP1Q09161 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.25□□□□□ -1.89
NCBP1Q09161 AC244517.1-201ENST00000606030 2086 ntBASIC3.25□□□□□ -1.89
NCBP1Q09161 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.25□□□□□ -1.89
NCBP1Q09161 RNU6-549P-201ENST00000384433 107 ntBASIC3.25□□□□□ -1.89
NCBP1Q09161 AL354719.1-201ENST00000406535 843 ntBASIC3.25□□□□□ -1.89
NCBP1Q09161 RPL7P10-201ENST00000417407 739 ntBASIC3.25□□□□□ -1.89
NCBP1Q09161 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.25□□□□□ -1.89
NCBP1Q09161 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.25□□□□□ -1.89
NCBP1Q09161 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.25□□□□□ -1.89
NCBP1Q09161 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.25□□□□□ -1.89
NCBP1Q09161 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms