Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC068831.7-201ENST00000616954 363 ntBASIC2.81□□□□□ -1.96
HMGCS1Q01581 AL590240.3-201ENST00000621416 943 ntBASIC2.81□□□□□ -1.96
HMGCS1Q01581 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.81□□□□□ -1.96
HMGCS1Q01581 AL645568.2-201ENST00000432815 1337 ntBASIC2.81□□□□□ -1.96
HMGCS1Q01581 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
HMGCS1Q01581 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
HMGCS1Q01581 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
HMGCS1Q01581 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
HMGCS1Q01581 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
HMGCS1Q01581 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.8□□□□□ -1.96
HMGCS1Q01581 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.8□□□□□ -1.96
HMGCS1Q01581 RPL9P7-201ENST00000330965 580 ntBASIC2.8□□□□□ -1.96
HMGCS1Q01581 MIR422A-201ENST00000362286 90 ntBASIC2.8□□□□□ -1.96
HMGCS1Q01581 RNU1-35P-201ENST00000362782 153 ntBASIC2.8□□□□□ -1.96
HMGCS1Q01581 SNORA71.1-201ENST00000364523 117 ntBASIC2.8□□□□□ -1.96
HMGCS1Q01581 RNU6-707P-201ENST00000364647 95 ntBASIC2.8□□□□□ -1.96
HMGCS1Q01581 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.8□□□□□ -1.96
HMGCS1Q01581 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.8□□□□□ -1.96
HMGCS1Q01581 MIR181B1-201ENST00000385240 110 ntBASIC2.8□□□□□ -1.96
HMGCS1Q01581 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.8□□□□□ -1.96
HMGCS1Q01581 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.8□□□□□ -1.96
HMGCS1Q01581 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.8□□□□□ -1.96
HMGCS1Q01581 BMS1P22-201ENST00000414726 313 ntBASIC2.8□□□□□ -1.96
HMGCS1Q01581 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.8□□□□□ -1.96
HMGCS1Q01581 MRPL50P2-201ENST00000416821 482 ntBASIC2.8□□□□□ -1.96
HMGCS1Q01581 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC2.8□□□□□ -1.96
HMGCS1Q01581 AL035410.1-201ENST00000427409 427 ntBASIC2.8□□□□□ -1.96
HMGCS1Q01581 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.8□□□□□ -1.96
HMGCS1Q01581 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.8□□□□□ -1.96
HMGCS1Q01581 RPL23AP83-201ENST00000434984 473 ntBASIC2.8□□□□□ -1.96
HMGCS1Q01581 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.8□□□□□ -1.96
HMGCS1Q01581 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.8□□□□□ -1.96
HMGCS1Q01581 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.8□□□□□ -1.96
HMGCS1Q01581 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
HMGCS1Q01581 RPS29P6-201ENST00000438196 145 ntBASIC2.8□□□□□ -1.96
HMGCS1Q01581 AC127537.2-201ENST00000439258 465 ntBASIC2.8□□□□□ -1.96
HMGCS1Q01581 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.8□□□□□ -1.96
HMGCS1Q01581 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.8□□□□□ -1.96
HMGCS1Q01581 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.8□□□□□ -1.96
HMGCS1Q01581 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.8□□□□□ -1.96
HMGCS1Q01581 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.8□□□□□ -1.96
HMGCS1Q01581 HMGB1P25-201ENST00000468402 607 ntBASIC2.8□□□□□ -1.96
HMGCS1Q01581 RPL27AP5-201ENST00000469428 449 ntBASIC2.8□□□□□ -1.96
HMGCS1Q01581 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.8□□□□□ -1.96
HMGCS1Q01581 AC108860.1-201ENST00000484521 383 ntBASIC2.8□□□□□ -1.96
HMGCS1Q01581 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
HMGCS1Q01581 OR2A20P-203ENST00000498397 1268 ntBASIC2.8□□□□□ -1.96
HMGCS1Q01581 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.8□□□□□ -1.96
HMGCS1Q01581 RNU6-711P-201ENST00000517255 106 ntBASIC2.8□□□□□ -1.96
HMGCS1Q01581 AP001317.1-201ENST00000531194 960 ntBASIC2.8□□□□□ -1.96
HMGCS1Q01581 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.8□□□□□ -1.96
HMGCS1Q01581 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.8□□□□□ -1.96
HMGCS1Q01581 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.8□□□□□ -1.96
HMGCS1Q01581 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC2.8□□□□□ -1.96
HMGCS1Q01581 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.8□□□□□ -1.96
HMGCS1Q01581 AC093519.1-201ENST00000566109 298 ntBASIC2.8□□□□□ -1.96
HMGCS1Q01581 AC006539.2-201ENST00000601729 572 ntBASIC2.8□□□□□ -1.96
HMGCS1Q01581 AC012119.1-201ENST00000603184 222 ntBASIC2.8□□□□□ -1.96
HMGCS1Q01581 BNIP3P11-201ENST00000603878 563 ntBASIC2.8□□□□□ -1.96
HMGCS1Q01581 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
HMGCS1Q01581 AL136370.1-201ENST00000608166 691 ntBASIC2.8□□□□□ -1.96
HMGCS1Q01581 AL592148.2-201ENST00000612210 372 ntBASIC2.8□□□□□ -1.96
HMGCS1Q01581 AC090116.1-201ENST00000615679 446 ntBASIC2.8□□□□□ -1.96
HMGCS1Q01581 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.8□□□□□ -1.96
HMGCS1Q01581 AC084824.4-201ENST00000620106 731 ntBASIC2.8□□□□□ -1.96
HMGCS1Q01581 AC009269.6-201ENST00000621778 588 ntBASIC2.8□□□□□ -1.96
HMGCS1Q01581 AC087821.2-201ENST00000637086 450 ntBASIC2.8□□□□□ -1.96
HMGCS1Q01581 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
HMGCS1Q01581 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
HMGCS1Q01581 AL161431.1-201ENST00000618966 4205 ntBASIC2.8□□□□□ -1.96
HMGCS1Q01581 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
HMGCS1Q01581 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.79□□□□□ -1.96
HMGCS1Q01581 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
HMGCS1Q01581 AL035425.3-201ENST00000564206 4996 ntBASIC2.79□□□□□ -1.96
HMGCS1Q01581 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
HMGCS1Q01581 AC130650.2-201ENST00000618736 2403 ntBASIC2.79□□□□□ -1.96
HMGCS1Q01581 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.79□□□□□ -1.96
HMGCS1Q01581 RNU6-339P-201ENST00000384310 107 ntBASIC2.79□□□□□ -1.96
HMGCS1Q01581 AL079342.2-201ENST00000403367 482 ntBASIC2.79□□□□□ -1.96
HMGCS1Q01581 NDUFB4P5-201ENST00000415445 361 ntBASIC2.79□□□□□ -1.96
HMGCS1Q01581 AC092634.6-201ENST00000418558 192 ntBASIC2.79□□□□□ -1.96
HMGCS1Q01581 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.79□□□□□ -1.96
HMGCS1Q01581 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.79□□□□□ -1.96
HMGCS1Q01581 AC012498.1-201ENST00000424037 437 ntBASIC2.79□□□□□ -1.96
HMGCS1Q01581 RAC1P8-201ENST00000427086 527 ntBASIC2.79□□□□□ -1.96
HMGCS1Q01581 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.79□□□□□ -1.96
HMGCS1Q01581 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.79□□□□□ -1.96
HMGCS1Q01581 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.79□□□□□ -1.96
HMGCS1Q01581 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.79□□□□□ -1.96
HMGCS1Q01581 MTATP6P14-201ENST00000455189 673 ntBASIC2.79□□□□□ -1.96
HMGCS1Q01581 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.79□□□□□ -1.96
HMGCS1Q01581 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
HMGCS1Q01581 SNORA48.10-201ENST00000516965 160 ntBASIC2.79□□□□□ -1.96
HMGCS1Q01581 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.79□□□□□ -1.96
HMGCS1Q01581 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.79□□□□□ -1.96
HMGCS1Q01581 FAM60DP-201ENST00000524174 632 ntBASIC2.79□□□□□ -1.96
HMGCS1Q01581 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.79□□□□□ -1.96
HMGCS1Q01581 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC2.79□□□□□ -1.96
HMGCS1Q01581 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.79□□□□□ -1.96
HMGCS1Q01581 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms