Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.33□□□□□ -2.04
H3F3AP84243 AC106782.4-201ENST00000568264 210 ntBASIC2.33□□□□□ -2.04
H3F3AP84243 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.33□□□□□ -2.04
H3F3AP84243 MIR4319-201ENST00000577285 85 ntBASIC2.33□□□□□ -2.04
H3F3AP84243 RPL23AP78-201ENST00000599928 470 ntBASIC2.33□□□□□ -2.04
H3F3AP84243 AC010620.2-201ENST00000600135 313 ntBASIC2.33□□□□□ -2.04
H3F3AP84243 DUXAP3-201ENST00000603616 594 ntBASIC2.33□□□□□ -2.04
H3F3AP84243 AC018618.2-201ENST00000604770 446 ntBASIC2.33□□□□□ -2.04
H3F3AP84243 OR2AS2P-201ENST00000606902 342 ntBASIC2.33□□□□□ -2.04
H3F3AP84243 AL161734.1-201ENST00000609720 557 ntBASIC2.33□□□□□ -2.04
H3F3AP84243 BX649567.1-201ENST00000642071 1134 ntBASIC2.33□□□□□ -2.04
H3F3AP84243 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
H3F3AP84243 AC090740.1-201ENST00000623193 2262 ntBASIC2.33□□□□□ -2.04
H3F3AP84243 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.33□□□□□ -2.04
H3F3AP84243 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
H3F3AP84243 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.33□□□□□ -2.04
H3F3AP84243 AC026241.1-201ENST00000517873 2142 ntBASIC2.32□□□□□ -2.04
H3F3AP84243 AC099654.7-201ENST00000635788 2127 ntBASIC2.32□□□□□ -2.04
H3F3AP84243 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
H3F3AP84243 AL122016.1-201ENST00000403365 367 ntBASIC2.32□□□□□ -2.04
H3F3AP84243 RPL7P37-201ENST00000425095 738 ntBASIC2.32□□□□□ -2.04
H3F3AP84243 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.32□□□□□ -2.04
H3F3AP84243 AC092685.1-201ENST00000447960 1243 ntBASIC2.32□□□□□ -2.04
H3F3AP84243 ST13P20-201ENST00000447996 1065 ntBASIC2.32□□□□□ -2.04
H3F3AP84243 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.32□□□□□ -2.04
H3F3AP84243 AL109933.2-201ENST00000452651 260 ntBASIC2.32□□□□□ -2.04
H3F3AP84243 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.32□□□□□ -2.04
H3F3AP84243 AL049873.1-201ENST00000480540 376 ntBASIC2.32□□□□□ -2.04
H3F3AP84243 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC2.32□□□□□ -2.04
H3F3AP84243 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.32□□□□□ -2.04
H3F3AP84243 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.32□□□□□ -2.04
H3F3AP84243 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC2.32□□□□□ -2.04
H3F3AP84243 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.32□□□□□ -2.04
H3F3AP84243 AC100870.1-201ENST00000522035 505 ntBASIC2.32□□□□□ -2.04
H3F3AP84243 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.32□□□□□ -2.04
H3F3AP84243 AC060766.3-201ENST00000591442 263 ntBASIC2.32□□□□□ -2.04
H3F3AP84243 AL035413.2-201ENST00000604801 525 ntBASIC2.32□□□□□ -2.04
H3F3AP84243 AC011374.2-201ENST00000607135 526 ntBASIC2.32□□□□□ -2.04
H3F3AP84243 AC090116.1-201ENST00000615679 446 ntBASIC2.32□□□□□ -2.04
H3F3AP84243 AL138880.2-201ENST00000616214 239 ntBASIC2.32□□□□□ -2.04
H3F3AP84243 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.32□□□□□ -2.04
H3F3AP84243 AC068620.4-201ENST00000636730 1182 ntBASIC2.32□□□□□ -2.04
H3F3AP84243 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
H3F3AP84243 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.32□□□□□ -2.04
H3F3AP84243 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
H3F3AP84243 SNORA5B-201ENST00000363786 132 ntBASIC2.31□□□□□ -2.04
H3F3AP84243 SNORA25.6-201ENST00000364121 118 ntBASIC2.31□□□□□ -2.04
H3F3AP84243 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
H3F3AP84243 RNU6-1074P-201ENST00000383995 104 ntBASIC2.31□□□□□ -2.04
H3F3AP84243 RPS3AP9-201ENST00000417027 792 ntBASIC2.31□□□□□ -2.04
H3F3AP84243 USP9YP20-201ENST00000419224 558 ntBASIC2.31□□□□□ -2.04
H3F3AP84243 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.31□□□□□ -2.04
H3F3AP84243 AC005189.1-201ENST00000431286 310 ntBASIC2.31□□□□□ -2.04
H3F3AP84243 RPL23AP74-201ENST00000437246 471 ntBASIC2.31□□□□□ -2.04
H3F3AP84243 LSM1P1-201ENST00000438629 273 ntBASIC2.31□□□□□ -2.04
H3F3AP84243 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC2.31□□□□□ -2.04
H3F3AP84243 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.31□□□□□ -2.04
H3F3AP84243 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.31□□□□□ -2.04
H3F3AP84243 CACYBPP2-201ENST00000453625 678 ntBASIC2.31□□□□□ -2.04
H3F3AP84243 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.31□□□□□ -2.04
H3F3AP84243 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.31□□□□□ -2.04
H3F3AP84243 OR5H5P-201ENST00000503164 928 ntBASIC2.31□□□□□ -2.04
H3F3AP84243 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
H3F3AP84243 OR5AK3P-201ENST00000527486 1297 ntBASIC2.31□□□□□ -2.04
H3F3AP84243 AC123904.3-201ENST00000547218 814 ntBASIC2.31□□□□□ -2.04
H3F3AP84243 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
H3F3AP84243 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.31□□□□□ -2.04
H3F3AP84243 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.31□□□□□ -2.04
H3F3AP84243 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.31□□□□□ -2.04
H3F3AP84243 HMGB1P6-201ENST00000569046 646 ntBASIC2.31□□□□□ -2.04
H3F3AP84243 AC008739.2-201ENST00000597006 317 ntBASIC2.31□□□□□ -2.04
H3F3AP84243 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.31□□□□□ -2.04
H3F3AP84243 AL355812.1-201ENST00000603215 216 ntBASIC2.31□□□□□ -2.04
H3F3AP84243 AC140725.3-201ENST00000616193 880 ntBASIC2.31□□□□□ -2.04
H3F3AP84243 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC2.31□□□□□ -2.04
H3F3AP84243 AC010297.1-201ENST00000623948 149 ntBASIC2.31□□□□□ -2.04
H3F3AP84243 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.31□□□□□ -2.04
H3F3AP84243 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.31□□□□□ -2.04
H3F3AP84243 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.31□□□□□ -2.04
H3F3AP84243 AP000526.1-201ENST00000603308 1388 ntBASIC2.31□□□□□ -2.04
H3F3AP84243 AC046144.1-201ENST00000478559 1853 ntBASIC2.31□□□□□ -2.04
H3F3AP84243 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
H3F3AP84243 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
H3F3AP84243 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
H3F3AP84243 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
H3F3AP84243 MIR493-201ENST00000385254 89 ntBASIC2.3□□□□□ -2.04
H3F3AP84243 RNU6-272P-201ENST00000411028 104 ntBASIC2.3□□□□□ -2.04
H3F3AP84243 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.3□□□□□ -2.04
H3F3AP84243 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.3□□□□□ -2.04
H3F3AP84243 TMEM167AP1-201ENST00000423409 219 ntBASIC2.3□□□□□ -2.04
H3F3AP84243 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.3□□□□□ -2.04
H3F3AP84243 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.3□□□□□ -2.04
H3F3AP84243 AC068135.1-201ENST00000446164 246 ntBASIC2.3□□□□□ -2.04
H3F3AP84243 SNRPGP6-201ENST00000451124 220 ntBASIC2.3□□□□□ -2.04
H3F3AP84243 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.3□□□□□ -2.04
H3F3AP84243 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
H3F3AP84243 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC2.3□□□□□ -2.04
H3F3AP84243 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
H3F3AP84243 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.3□□□□□ -2.04
H3F3AP84243 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms