Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 RPL12P20-201ENST00000475538 479 ntBASIC4.2□□□□□ -1.74
NKX6-1P78426 RPS27AP1-201ENST00000475545 471 ntBASIC4.2□□□□□ -1.74
NKX6-1P78426 VN1R104P-201ENST00000505115 1009 ntBASIC4.2□□□□□ -1.74
NKX6-1P78426 SLC25A15P5-201ENST00000508033 253 ntBASIC4.2□□□□□ -1.74
NKX6-1P78426 Y_RNA.719-201ENST00000517156 106 ntBASIC4.2□□□□□ -1.74
NKX6-1P78426 AC105031.1-201ENST00000518550 476 ntBASIC4.2□□□□□ -1.74
NKX6-1P78426 AC100870.1-201ENST00000522035 505 ntBASIC4.2□□□□□ -1.74
NKX6-1P78426 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.2□□□□□ -1.74
NKX6-1P78426 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.2□□□□□ -1.74
NKX6-1P78426 AC105233.3-201ENST00000531125 744 ntBASIC4.2□□□□□ -1.74
NKX6-1P78426 AK6P1-201ENST00000540219 478 ntBASIC4.2□□□□□ -1.74
NKX6-1P78426 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.2□□□□□ -1.74
NKX6-1P78426 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.2□□□□□ -1.74
NKX6-1P78426 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.2□□□□□ -1.74
NKX6-1P78426 HMGB1P6-201ENST00000569046 646 ntBASIC4.2□□□□□ -1.74
NKX6-1P78426 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.2□□□□□ -1.74
NKX6-1P78426 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
NKX6-1P78426 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.2□□□□□ -1.74
NKX6-1P78426 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.2□□□□□ -1.74
NKX6-1P78426 AF038458.1-201ENST00000588406 262 ntBASIC4.2□□□□□ -1.74
NKX6-1P78426 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.2□□□□□ -1.74
NKX6-1P78426 AP000907.4-201ENST00000604143 237 ntBASIC4.2□□□□□ -1.74
NKX6-1P78426 AC007497.1-201ENST00000610421 561 ntBASIC4.2□□□□□ -1.74
NKX6-1P78426 SNHG22-203ENST00000617833 660 ntBASIC4.2□□□□□ -1.74
NKX6-1P78426 MIR6853-201ENST00000619642 74 ntBASIC4.2□□□□□ -1.74
NKX6-1P78426 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC4.2□□□□□ -1.74
NKX6-1P78426 MIR1321-201ENST00000637766 79 ntBASIC4.2□□□□□ -1.74
NKX6-1P78426 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.2□□□□□ -1.74
NKX6-1P78426 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.2□□□□□ -1.74
NKX6-1P78426 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
NKX6-1P78426 AC139713.2-214ENST00000642059 1811 ntBASIC4.2□□□□□ -1.74
NKX6-1P78426 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
NKX6-1P78426 AC010928.1-201ENST00000592477 1447 ntBASIC4.2□□□□□ -1.74
NKX6-1P78426 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
NKX6-1P78426 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.2□□□□□ -1.74
NKX6-1P78426 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NKX6-1P78426 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
NKX6-1P78426 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.19□□□□□ -1.74
NKX6-1P78426 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
NKX6-1P78426 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
NKX6-1P78426 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.19□□□□□ -1.74
NKX6-1P78426 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NKX6-1P78426 Y_RNA.126-201ENST00000363382 111 ntBASIC4.19□□□□□ -1.74
NKX6-1P78426 RNU6-511P-201ENST00000363496 107 ntBASIC4.19□□□□□ -1.74
NKX6-1P78426 RNU6-1284P-201ENST00000363701 100 ntBASIC4.19□□□□□ -1.74
NKX6-1P78426 RNU6-1283P-201ENST00000365314 105 ntBASIC4.19□□□□□ -1.74
NKX6-1P78426 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NKX6-1P78426 U3.22-201ENST00000391120 215 ntBASIC4.19□□□□□ -1.74
NKX6-1P78426 RPS4XP8-201ENST00000402039 771 ntBASIC4.19□□□□□ -1.74
NKX6-1P78426 AL136372.1-201ENST00000403060 228 ntBASIC4.19□□□□□ -1.74
NKX6-1P78426 RPL7AP73-201ENST00000413490 353 ntBASIC4.19□□□□□ -1.74
NKX6-1P78426 MRPL50P2-201ENST00000416821 482 ntBASIC4.19□□□□□ -1.74
NKX6-1P78426 HMGB3P20-201ENST00000417997 600 ntBASIC4.19□□□□□ -1.74
NKX6-1P78426 MED13P1-201ENST00000428342 171 ntBASIC4.19□□□□□ -1.74
NKX6-1P78426 AC090774.1-201ENST00000435925 246 ntBASIC4.19□□□□□ -1.74
NKX6-1P78426 RPL35AP21-201ENST00000437667 333 ntBASIC4.19□□□□□ -1.74
NKX6-1P78426 AC005154.2-201ENST00000438110 379 ntBASIC4.19□□□□□ -1.74
NKX6-1P78426 RPL7P54-201ENST00000438336 674 ntBASIC4.19□□□□□ -1.74
NKX6-1P78426 AC122718.1-201ENST00000439448 744 ntBASIC4.19□□□□□ -1.74
NKX6-1P78426 BNIP3P2-201ENST00000441221 577 ntBASIC4.19□□□□□ -1.74
NKX6-1P78426 AL353572.1-201ENST00000442490 417 ntBASIC4.19□□□□□ -1.74
NKX6-1P78426 MTCO3P45-201ENST00000443036 613 ntBASIC4.19□□□□□ -1.74
NKX6-1P78426 MTND4P18-201ENST00000447010 465 ntBASIC4.19□□□□□ -1.74
NKX6-1P78426 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.19□□□□□ -1.74
NKX6-1P78426 RPL7AP28-201ENST00000464513 571 ntBASIC4.19□□□□□ -1.74
NKX6-1P78426 FAM133DP-201ENST00000464802 691 ntBASIC4.19□□□□□ -1.74
NKX6-1P78426 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.19□□□□□ -1.74
NKX6-1P78426 RN7SL817P-201ENST00000480777 288 ntBASIC4.19□□□□□ -1.74
NKX6-1P78426 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC4.19□□□□□ -1.74
NKX6-1P78426 AC083829.1-201ENST00000503756 657 ntBASIC4.19□□□□□ -1.74
NKX6-1P78426 MLLT10P2-201ENST00000506434 249 ntBASIC4.19□□□□□ -1.74
NKX6-1P78426 AC093840.1-201ENST00000511599 336 ntBASIC4.19□□□□□ -1.74
NKX6-1P78426 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.19□□□□□ -1.74
NKX6-1P78426 RNU6-1281P-201ENST00000516223 105 ntBASIC4.19□□□□□ -1.74
NKX6-1P78426 Y_RNA.704-201ENST00000516851 102 ntBASIC4.19□□□□□ -1.74
NKX6-1P78426 SNORA31.20-201ENST00000517111 133 ntBASIC4.19□□□□□ -1.74
NKX6-1P78426 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.19□□□□□ -1.74
NKX6-1P78426 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.19□□□□□ -1.74
NKX6-1P78426 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.19□□□□□ -1.74
NKX6-1P78426 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.19□□□□□ -1.74
NKX6-1P78426 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NKX6-1P78426 RN7SL690P-201ENST00000582087 240 ntBASIC4.19□□□□□ -1.74
NKX6-1P78426 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
NKX6-1P78426 AC025449.1-201ENST00000603896 529 ntBASIC4.19□□□□□ -1.74
NKX6-1P78426 AC007621.1-201ENST00000604544 437 ntBASIC4.19□□□□□ -1.74
NKX6-1P78426 AL031666.3-201ENST00000609320 1006 ntBASIC4.19□□□□□ -1.74
NKX6-1P78426 AC015967.1-201ENST00000619893 476 ntBASIC4.19□□□□□ -1.74
NKX6-1P78426 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NKX6-1P78426 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NKX6-1P78426 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
NKX6-1P78426 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NKX6-1P78426 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NKX6-1P78426 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NKX6-1P78426 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
NKX6-1P78426 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NKX6-1P78426 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.19□□□□□ -1.74
NKX6-1P78426 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NKX6-1P78426 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.18□□□□□ -1.74
NKX6-1P78426 GABPAP-201ENST00000419271 1356 ntBASIC4.18□□□□□ -1.74
NKX6-1P78426 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms