Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.14□□□□□ -1.91
CASP4P49662 SCGB1D5P-201ENST00000515134 247 ntBASIC3.14□□□□□ -1.91
CASP4P49662 SNORA48.10-201ENST00000516965 160 ntBASIC3.14□□□□□ -1.91
CASP4P49662 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.14□□□□□ -1.91
CASP4P49662 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.14□□□□□ -1.91
CASP4P49662 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.14□□□□□ -1.91
CASP4P49662 EEF1B2P4-201ENST00000551398 348 ntBASIC3.14□□□□□ -1.91
CASP4P49662 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.14□□□□□ -1.91
CASP4P49662 AC087481.2-201ENST00000565492 330 ntBASIC3.14□□□□□ -1.91
CASP4P49662 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.14□□□□□ -1.91
CASP4P49662 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.14□□□□□ -1.91
CASP4P49662 AP001029.3-201ENST00000588063 596 ntBASIC3.14□□□□□ -1.91
CASP4P49662 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.14□□□□□ -1.91
CASP4P49662 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.14□□□□□ -1.91
CASP4P49662 AC099785.1-201ENST00000605697 437 ntBASIC3.14□□□□□ -1.91
CASP4P49662 AC004832.5-201ENST00000608677 401 ntBASIC3.14□□□□□ -1.91
CASP4P49662 AC087821.2-201ENST00000637086 450 ntBASIC3.14□□□□□ -1.91
CASP4P49662 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CASP4P49662 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CASP4P49662 AL645568.2-201ENST00000432815 1337 ntBASIC3.14□□□□□ -1.91
CASP4P49662 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
CASP4P49662 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.14□□□□□ -1.91
CASP4P49662 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.14□□□□□ -1.91
CASP4P49662 AC000403.1-201ENST00000613696 3585 ntBASIC3.13□□□□□ -1.91
CASP4P49662 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CASP4P49662 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CASP4P49662 SNORA9.2-201ENST00000365361 133 ntBASIC3.13□□□□□ -1.91
CASP4P49662 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CASP4P49662 MCTS2P-201ENST00000394552 546 ntBASIC3.13□□□□□ -1.91
CASP4P49662 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.13□□□□□ -1.91
CASP4P49662 EEF1A1P41-201ENST00000414667 207 ntBASIC3.13□□□□□ -1.91
CASP4P49662 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.13□□□□□ -1.91
CASP4P49662 AC092634.2-201ENST00000428146 1010 ntBASIC3.13□□□□□ -1.91
CASP4P49662 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.13□□□□□ -1.91
CASP4P49662 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.13□□□□□ -1.91
CASP4P49662 AC112492.1-201ENST00000449607 712 ntBASIC3.13□□□□□ -1.91
CASP4P49662 HMGN2P13-201ENST00000476476 274 ntBASIC3.13□□□□□ -1.91
CASP4P49662 RN7SL283P-201ENST00000489055 303 ntBASIC3.13□□□□□ -1.91
CASP4P49662 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.13□□□□□ -1.91
CASP4P49662 AC008837.1-201ENST00000511513 412 ntBASIC3.13□□□□□ -1.91
CASP4P49662 AC105914.1-201ENST00000511798 226 ntBASIC3.13□□□□□ -1.91
CASP4P49662 SNORA74D-201ENST00000516404 141 ntBASIC3.13□□□□□ -1.91
CASP4P49662 AC027309.2-201ENST00000520566 192 ntBASIC3.13□□□□□ -1.91
CASP4P49662 FAM60DP-201ENST00000524174 632 ntBASIC3.13□□□□□ -1.91
CASP4P49662 AC018630.1-201ENST00000541376 925 ntBASIC3.13□□□□□ -1.91
CASP4P49662 AC126177.3-201ENST00000551839 688 ntBASIC3.13□□□□□ -1.91
CASP4P49662 GTF2IP8-201ENST00000560687 584 ntBASIC3.13□□□□□ -1.91
CASP4P49662 AC055876.1-202ENST00000567053 138 ntBASIC3.13□□□□□ -1.91
CASP4P49662 AC010738.1-201ENST00000604970 987 ntBASIC3.13□□□□□ -1.91
CASP4P49662 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.13□□□□□ -1.91
CASP4P49662 AC092954.1-201ENST00000609121 445 ntBASIC3.13□□□□□ -1.91
CASP4P49662 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.13□□□□□ -1.91
CASP4P49662 AL592148.2-201ENST00000612210 372 ntBASIC3.13□□□□□ -1.91
CASP4P49662 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.13□□□□□ -1.91
CASP4P49662 CYP3A51P-201ENST00000633513 256 ntBASIC3.13□□□□□ -1.91
CASP4P49662 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.13□□□□□ -1.91
CASP4P49662 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CASP4P49662 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
CASP4P49662 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CASP4P49662 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CASP4P49662 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
CASP4P49662 AC010733.2-201ENST00000589496 5702 ntBASIC3.12□□□□□ -1.91
CASP4P49662 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.12□□□□□ -1.91
CASP4P49662 SUGT1P1-201ENST00000379514 476 ntBASIC3.12□□□□□ -1.91
CASP4P49662 SNORA18.3-201ENST00000384122 132 ntBASIC3.12□□□□□ -1.91
CASP4P49662 U3.29-201ENST00000391296 212 ntBASIC3.12□□□□□ -1.91
CASP4P49662 RNU2-28P-201ENST00000410457 189 ntBASIC3.12□□□□□ -1.91
CASP4P49662 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.12□□□□□ -1.91
CASP4P49662 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.12□□□□□ -1.91
CASP4P49662 RPL7P44-201ENST00000424827 742 ntBASIC3.12□□□□□ -1.91
CASP4P49662 DPRXP1-201ENST00000426312 460 ntBASIC3.12□□□□□ -1.91
CASP4P49662 AC009969.1-201ENST00000438726 172 ntBASIC3.12□□□□□ -1.91
CASP4P49662 AC112653.1-201ENST00000443851 386 ntBASIC3.12□□□□□ -1.91
CASP4P49662 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.12□□□□□ -1.91
CASP4P49662 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CASP4P49662 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CASP4P49662 AC015908.1-201ENST00000478739 476 ntBASIC3.12□□□□□ -1.91
CASP4P49662 AC013828.1-201ENST00000481845 158 ntBASIC3.12□□□□□ -1.91
CASP4P49662 AC011825.1-201ENST00000484967 388 ntBASIC3.12□□□□□ -1.91
CASP4P49662 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.12□□□□□ -1.91
CASP4P49662 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CASP4P49662 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.12□□□□□ -1.91
CASP4P49662 RNA5SP380-201ENST00000517190 98 ntBASIC3.12□□□□□ -1.91
CASP4P49662 MTND1P36-201ENST00000522384 936 ntBASIC3.12□□□□□ -1.91
CASP4P49662 AP003066.2-201ENST00000529375 555 ntBASIC3.12□□□□□ -1.91
CASP4P49662 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.12□□□□□ -1.91
CASP4P49662 CYCSP39-201ENST00000565821 309 ntBASIC3.12□□□□□ -1.91
CASP4P49662 AC008507.2-201ENST00000588402 1176 ntBASIC3.12□□□□□ -1.91
CASP4P49662 AP002802.2-201ENST00000605877 235 ntBASIC3.12□□□□□ -1.91
CASP4P49662 AC231759.1-201ENST00000616455 597 ntBASIC3.12□□□□□ -1.91
CASP4P49662 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.12□□□□□ -1.91
CASP4P49662 AC080188.3-201ENST00000624842 748 ntBASIC3.12□□□□□ -1.91
CASP4P49662 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CASP4P49662 ZNF807-201ENST00000328088 1707 ntBASIC3.12□□□□□ -1.91
CASP4P49662 AC008264.2-201ENST00000610193 3731 ntBASIC3.12□□□□□ -1.91
CASP4P49662 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.12□□□□□ -1.91
CASP4P49662 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.12□□□□□ -1.91
CASP4P49662 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CASP4P49662 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CASP4P49662 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms