Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CXCL12P48061 AC117529.2-201ENST00000512159 2068 ntBASIC2.7□□□□□ -1.98
CXCL12P48061 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CXCL12P48061 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
CXCL12P48061 MIR26A1-201ENST00000362205 77 ntBASIC2.7□□□□□ -1.98
CXCL12P48061 RNU5B-1-201ENST00000363286 116 ntBASIC2.7□□□□□ -1.98
CXCL12P48061 RNVU1-3-201ENST00000364313 161 ntBASIC2.7□□□□□ -1.98
CXCL12P48061 OR1L1-202ENST00000373686 1083 ntBASIC2.7□□□□□ -1.98
CXCL12P48061 SFR1P1-201ENST00000403720 688 ntBASIC2.7□□□□□ -1.98
CXCL12P48061 RN7SKP58-201ENST00000411010 305 ntBASIC2.7□□□□□ -1.98
CXCL12P48061 AC092638.1-201ENST00000411966 1275 ntBASIC2.7□□□□□ -1.98
CXCL12P48061 OR51A3P-201ENST00000413596 924 ntBASIC2.7□□□□□ -1.98
CXCL12P48061 AC245054.2-201ENST00000415639 319 ntBASIC2.7□□□□□ -1.98
CXCL12P48061 AL513477.1-202ENST00000417061 214 ntBASIC2.7□□□□□ -1.98
CXCL12P48061 AC009237.2-201ENST00000421358 284 ntBASIC2.7□□□□□ -1.98
CXCL12P48061 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.7□□□□□ -1.98
CXCL12P48061 RPP40P1-201ENST00000426762 456 ntBASIC2.7□□□□□ -1.98
CXCL12P48061 AC234064.1-201ENST00000436312 247 ntBASIC2.7□□□□□ -1.98
CXCL12P48061 AC002542.1-201ENST00000440683 193 ntBASIC2.7□□□□□ -1.98
CXCL12P48061 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.7□□□□□ -1.98
CXCL12P48061 WASF1P1-201ENST00000447560 1131 ntBASIC2.7□□□□□ -1.98
CXCL12P48061 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.7□□□□□ -1.98
CXCL12P48061 ARPC3P2-201ENST00000457786 533 ntBASIC2.7□□□□□ -1.98
CXCL12P48061 XACT-201ENST00000468762 497 ntTSL 5 BASIC2.7□□□□□ -1.98
CXCL12P48061 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CXCL12P48061 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC2.7□□□□□ -1.98
CXCL12P48061 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.7□□□□□ -1.98
CXCL12P48061 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.7□□□□□ -1.98
CXCL12P48061 TMEM248P1-201ENST00000510579 951 ntBASIC2.7□□□□□ -1.98
CXCL12P48061 AC008837.1-201ENST00000511513 412 ntBASIC2.7□□□□□ -1.98
CXCL12P48061 RNU4-60P-201ENST00000517239 135 ntBASIC2.7□□□□□ -1.98
CXCL12P48061 AC104115.2-201ENST00000523026 687 ntBASIC2.7□□□□□ -1.98
CXCL12P48061 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.7□□□□□ -1.98
CXCL12P48061 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC2.7□□□□□ -1.98
CXCL12P48061 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.7□□□□□ -1.98
CXCL12P48061 BPTFP1-201ENST00000579209 492 ntBASIC2.7□□□□□ -1.98
CXCL12P48061 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.7□□□□□ -1.98
CXCL12P48061 AC008507.1-201ENST00000587506 734 ntBASIC2.7□□□□□ -1.98
CXCL12P48061 BDH2P1-201ENST00000602288 736 ntBASIC2.7□□□□□ -1.98
CXCL12P48061 AL158827.2-201ENST00000602494 330 ntBASIC2.7□□□□□ -1.98
CXCL12P48061 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.7□□□□□ -1.98
CXCL12P48061 AL451074.6-201ENST00000608512 729 ntBASIC2.7□□□□□ -1.98
CXCL12P48061 AC022079.2-201ENST00000619739 566 ntBASIC2.7□□□□□ -1.98
CXCL12P48061 AL691447.3-201ENST00000635020 330 ntBASIC2.7□□□□□ -1.98
CXCL12P48061 BX649567.1-201ENST00000642071 1134 ntBASIC2.7□□□□□ -1.98
CXCL12P48061 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
CXCL12P48061 ELL2P4-201ENST00000446870 1376 ntBASIC2.7□□□□□ -1.98
CXCL12P48061 MTND5P27-201ENST00000428871 1720 ntBASIC2.7□□□□□ -1.98
CXCL12P48061 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.7□□□□□ -1.98
CXCL12P48061 AC011978.2-201ENST00000569835 2054 ntBASIC2.7□□□□□ -1.98
CXCL12P48061 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
CXCL12P48061 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CXCL12P48061 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.69□□□□□ -1.98
CXCL12P48061 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.69□□□□□ -1.98
CXCL12P48061 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
CXCL12P48061 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CXCL12P48061 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
CXCL12P48061 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.69□□□□□ -1.98
CXCL12P48061 AC108206.1-201ENST00000570186 4159 ntBASIC2.69□□□□□ -1.98
CXCL12P48061 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CXCL12P48061 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.69□□□□□ -1.98
CXCL12P48061 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CXCL12P48061 RNU6-444P-201ENST00000383988 108 ntBASIC2.69□□□□□ -1.98
CXCL12P48061 MCTS2P-201ENST00000394552 546 ntBASIC2.69□□□□□ -1.98
CXCL12P48061 CYCSP45-201ENST00000402289 315 ntBASIC2.69□□□□□ -1.98
CXCL12P48061 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.69□□□□□ -1.98
CXCL12P48061 AC012498.1-201ENST00000424037 437 ntBASIC2.69□□□□□ -1.98
CXCL12P48061 B3GNT2P1-201ENST00000434960 952 ntBASIC2.69□□□□□ -1.98
CXCL12P48061 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.69□□□□□ -1.98
CXCL12P48061 HMGB3P15-201ENST00000507326 574 ntBASIC2.69□□□□□ -1.98
CXCL12P48061 AC109471.1-201ENST00000511631 612 ntBASIC2.69□□□□□ -1.98
CXCL12P48061 AC119751.1-201ENST00000513357 765 ntBASIC2.69□□□□□ -1.98
CXCL12P48061 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC2.69□□□□□ -1.98
CXCL12P48061 AC112198.4-201ENST00000515450 351 ntBASIC2.69□□□□□ -1.98
CXCL12P48061 RNA5SP380-201ENST00000517190 98 ntBASIC2.69□□□□□ -1.98
CXCL12P48061 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.69□□□□□ -1.98
CXCL12P48061 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.69□□□□□ -1.98
CXCL12P48061 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
CXCL12P48061 CYB5AP5-201ENST00000549779 389 ntBASIC2.69□□□□□ -1.98
CXCL12P48061 AL391156.1-201ENST00000554965 554 ntBASIC2.69□□□□□ -1.98
CXCL12P48061 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC2.69□□□□□ -1.98
CXCL12P48061 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC2.69□□□□□ -1.98
CXCL12P48061 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.69□□□□□ -1.98
CXCL12P48061 AC023825.1-201ENST00000566704 1030 ntBASIC2.69□□□□□ -1.98
CXCL12P48061 AC005951.1-201ENST00000576706 485 ntBASIC2.69□□□□□ -1.98
CXCL12P48061 MIR4474-201ENST00000579189 78 ntBASIC2.69□□□□□ -1.98
CXCL12P48061 HMGN2P28-201ENST00000606102 262 ntBASIC2.69□□□□□ -1.98
CXCL12P48061 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
CXCL12P48061 AP000943.4-201ENST00000622912 357 ntBASIC2.69□□□□□ -1.98
CXCL12P48061 AC103798.2-201ENST00000624292 632 ntBASIC2.69□□□□□ -1.98
CXCL12P48061 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
CXCL12P48061 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.69□□□□□ -1.98
CXCL12P48061 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
CXCL12P48061 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.69□□□□□ -1.98
CXCL12P48061 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC2.69□□□□□ -1.98
CXCL12P48061 SGO1P1-201ENST00000603525 1447 ntBASIC2.68□□□□□ -1.98
CXCL12P48061 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
CXCL12P48061 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
CXCL12P48061 U3.6-201ENST00000363622 211 ntBASIC2.68□□□□□ -1.98
CXCL12P48061 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms