Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.74□□□□□ -1.65
HOXC12P31275 AL389915.2-201ENST00000454576 441 ntBASIC4.74□□□□□ -1.65
HOXC12P31275 HMGN1P10-201ENST00000474557 553 ntBASIC4.74□□□□□ -1.65
HOXC12P31275 RPS24P16-201ENST00000497294 392 ntBASIC4.74□□□□□ -1.65
HOXC12P31275 AC083829.1-201ENST00000503756 657 ntBASIC4.74□□□□□ -1.65
HOXC12P31275 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC4.74□□□□□ -1.65
HOXC12P31275 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HOXC12P31275 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.74□□□□□ -1.65
HOXC12P31275 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.74□□□□□ -1.65
HOXC12P31275 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
HOXC12P31275 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.74□□□□□ -1.65
HOXC12P31275 AP003072.1-201ENST00000531740 145 ntBASIC4.74□□□□□ -1.65
HOXC12P31275 AC022882.1-201ENST00000532142 501 ntBASIC4.74□□□□□ -1.65
HOXC12P31275 AC126177.3-201ENST00000551839 688 ntBASIC4.74□□□□□ -1.65
HOXC12P31275 AL162431.4-201ENST00000604674 411 ntBASIC4.74□□□□□ -1.65
HOXC12P31275 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.74□□□□□ -1.65
HOXC12P31275 AL731566.2-201ENST00000618971 317 ntBASIC4.74□□□□□ -1.65
HOXC12P31275 MIR6130-201ENST00000619419 109 ntBASIC4.74□□□□□ -1.65
HOXC12P31275 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.74□□□□□ -1.65
HOXC12P31275 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC4.74□□□□□ -1.65
HOXC12P31275 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.74□□□□□ -1.65
HOXC12P31275 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC4.74□□□□□ -1.65
HOXC12P31275 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HOXC12P31275 AC090229.1-201ENST00000590983 1609 ntBASIC4.74□□□□□ -1.65
HOXC12P31275 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
HOXC12P31275 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
HOXC12P31275 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
HOXC12P31275 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HOXC12P31275 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HOXC12P31275 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.74□□□□□ -1.65
HOXC12P31275 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HOXC12P31275 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.73□□□□□ -1.65
HOXC12P31275 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
HOXC12P31275 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
HOXC12P31275 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HOXC12P31275 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.73□□□□□ -1.65
HOXC12P31275 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HOXC12P31275 MIR133B-201ENST00000362210 119 ntBASIC4.73□□□□□ -1.65
HOXC12P31275 RNU6-946P-201ENST00000383878 107 ntBASIC4.73□□□□□ -1.65
HOXC12P31275 RNU6-701P-201ENST00000384059 107 ntBASIC4.73□□□□□ -1.65
HOXC12P31275 RNU6-692P-201ENST00000384496 107 ntBASIC4.73□□□□□ -1.65
HOXC12P31275 MIR141-201ENST00000384975 95 ntBASIC4.73□□□□□ -1.65
HOXC12P31275 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HOXC12P31275 AL133388.1-201ENST00000404509 287 ntBASIC4.73□□□□□ -1.65
HOXC12P31275 RPS4XP9-201ENST00000405151 780 ntBASIC4.73□□□□□ -1.65
HOXC12P31275 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC4.73□□□□□ -1.65
HOXC12P31275 RNU6-387P-201ENST00000411331 105 ntBASIC4.73□□□□□ -1.65
HOXC12P31275 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.73□□□□□ -1.65
HOXC12P31275 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.73□□□□□ -1.65
HOXC12P31275 AC108075.1-201ENST00000424692 529 ntBASIC4.73□□□□□ -1.65
HOXC12P31275 KCTD9P3-201ENST00000434597 1169 ntBASIC4.73□□□□□ -1.65
HOXC12P31275 AC004866.2-201ENST00000438285 481 ntBASIC4.73□□□□□ -1.65
HOXC12P31275 AC009220.1-201ENST00000451614 275 ntBASIC4.73□□□□□ -1.65
HOXC12P31275 snoU13.3-201ENST00000459441 104 ntBASIC4.73□□□□□ -1.65
HOXC12P31275 RNU6-1208P-201ENST00000459588 107 ntBASIC4.73□□□□□ -1.65
HOXC12P31275 AC004801.2-202ENST00000463559 283 ntBASIC4.73□□□□□ -1.65
HOXC12P31275 S100A11P1-201ENST00000477525 312 ntBASIC4.73□□□□□ -1.65
HOXC12P31275 AL049874.2-201ENST00000492636 288 ntBASIC4.73□□□□□ -1.65
HOXC12P31275 RBBP4P6-201ENST00000508098 202 ntBASIC4.73□□□□□ -1.65
HOXC12P31275 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.73□□□□□ -1.65
HOXC12P31275 AP000763.2-201ENST00000540641 163 ntBASIC4.73□□□□□ -1.65
HOXC12P31275 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.73□□□□□ -1.65
HOXC12P31275 MTCO3P13-201ENST00000577757 781 ntBASIC4.73□□□□□ -1.65
HOXC12P31275 RN7SL356P-201ENST00000582228 248 ntBASIC4.73□□□□□ -1.65
HOXC12P31275 MIR4480-201ENST00000582492 71 ntBASIC4.73□□□□□ -1.65
HOXC12P31275 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.73□□□□□ -1.65
HOXC12P31275 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.73□□□□□ -1.65
HOXC12P31275 AC022432.1-201ENST00000595739 310 ntBASIC4.73□□□□□ -1.65
HOXC12P31275 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.73□□□□□ -1.65
HOXC12P31275 AL133215.3-201ENST00000609801 448 ntBASIC4.73□□□□□ -1.65
HOXC12P31275 AL450472.3-201ENST00000615578 367 ntBASIC4.73□□□□□ -1.65
HOXC12P31275 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HOXC12P31275 SMG1P4-204ENST00000523028 4131 ntBASIC4.73□□□□□ -1.65
HOXC12P31275 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.73□□□□□ -1.65
HOXC12P31275 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.73□□□□□ -1.65
HOXC12P31275 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
HOXC12P31275 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.73□□□□□ -1.65
HOXC12P31275 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
HOXC12P31275 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HOXC12P31275 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC4.73□□□□□ -1.65
HOXC12P31275 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
HOXC12P31275 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.73□□□□□ -1.65
HOXC12P31275 FAM91A3P-201ENST00000456826 2544 ntBASIC4.73□□□□□ -1.65
HOXC12P31275 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
HOXC12P31275 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HOXC12P31275 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HOXC12P31275 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.72□□□□□ -1.65
HOXC12P31275 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.72□□□□□ -1.65
HOXC12P31275 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.72□□□□□ -1.65
HOXC12P31275 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.72□□□□□ -1.65
HOXC12P31275 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HOXC12P31275 TPTE2P4-201ENST00000258589 1605 ntBASIC4.72□□□□□ -1.65
HOXC12P31275 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
HOXC12P31275 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HOXC12P31275 AL136964.1-201ENST00000622038 2990 ntBASIC4.72□□□□□ -1.65
HOXC12P31275 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.72□□□□□ -1.65
HOXC12P31275 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.72□□□□□ -1.65
HOXC12P31275 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
HOXC12P31275 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HOXC12P31275 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms