Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
ABCD3P28288 AC018555.1-201ENST00000567548 1980 ntBASIC3.78□□□□□ -1.8
ABCD3P28288 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
ABCD3P28288 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.78□□□□□ -1.8
ABCD3P28288 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
ABCD3P28288 SNORA60-201ENST00000362396 134 ntBASIC3.78□□□□□ -1.8
ABCD3P28288 RNU5E-8P-201ENST00000363502 116 ntBASIC3.78□□□□□ -1.8
ABCD3P28288 RNA5SP130-201ENST00000364431 114 ntBASIC3.78□□□□□ -1.8
ABCD3P28288 RNU4-91P-201ENST00000364778 135 ntBASIC3.78□□□□□ -1.8
ABCD3P28288 RNU5E-5P-201ENST00000365379 116 ntBASIC3.78□□□□□ -1.8
ABCD3P28288 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
ABCD3P28288 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.78□□□□□ -1.8
ABCD3P28288 RPL7P25-201ENST00000404151 721 ntBASIC3.78□□□□□ -1.8
ABCD3P28288 MIR1302-8-201ENST00000408342 128 ntBASIC3.78□□□□□ -1.8
ABCD3P28288 MIR1290-201ENST00000408735 78 ntBASIC3.78□□□□□ -1.8
ABCD3P28288 RNA5SP317-201ENST00000410176 116 ntBASIC3.78□□□□□ -1.8
ABCD3P28288 RNA5SP311-201ENST00000411290 116 ntBASIC3.78□□□□□ -1.8
ABCD3P28288 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.78□□□□□ -1.8
ABCD3P28288 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.78□□□□□ -1.8
ABCD3P28288 CYCSP46-201ENST00000423569 204 ntBASIC3.78□□□□□ -1.8
ABCD3P28288 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.78□□□□□ -1.8
ABCD3P28288 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.78□□□□□ -1.8
ABCD3P28288 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.78□□□□□ -1.8
ABCD3P28288 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.78□□□□□ -1.8
ABCD3P28288 RPL26P6-201ENST00000440913 438 ntBASIC3.78□□□□□ -1.8
ABCD3P28288 TRIM60P18-201ENST00000441518 828 ntBASIC3.78□□□□□ -1.8
ABCD3P28288 MTND2P22-201ENST00000444325 1033 ntBASIC3.78□□□□□ -1.8
ABCD3P28288 COX6CP12-201ENST00000446748 202 ntBASIC3.78□□□□□ -1.8
ABCD3P28288 AL592447.1-201ENST00000447592 540 ntBASIC3.78□□□□□ -1.8
ABCD3P28288 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.78□□□□□ -1.8
ABCD3P28288 CEACAMP4-201ENST00000457676 421 ntBASIC3.78□□□□□ -1.8
ABCD3P28288 SNRPGP3-201ENST00000469405 227 ntBASIC3.78□□□□□ -1.8
ABCD3P28288 RN7SL585P-201ENST00000470538 280 ntBASIC3.78□□□□□ -1.8
ABCD3P28288 AC055855.1-201ENST00000489563 579 ntBASIC3.78□□□□□ -1.8
ABCD3P28288 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
ABCD3P28288 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
ABCD3P28288 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
ABCD3P28288 NDUFB4P9-201ENST00000511646 388 ntBASIC3.78□□□□□ -1.8
ABCD3P28288 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.78□□□□□ -1.8
ABCD3P28288 RNU1-61P-201ENST00000516107 151 ntBASIC3.78□□□□□ -1.8
ABCD3P28288 RNA5SP315-201ENST00000516340 116 ntBASIC3.78□□□□□ -1.8
ABCD3P28288 RNA5SP312-201ENST00000517068 116 ntBASIC3.78□□□□□ -1.8
ABCD3P28288 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.78□□□□□ -1.8
ABCD3P28288 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.78□□□□□ -1.8
ABCD3P28288 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.78□□□□□ -1.8
ABCD3P28288 AL133271.1-201ENST00000538229 291 ntBASIC3.78□□□□□ -1.8
ABCD3P28288 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.78□□□□□ -1.8
ABCD3P28288 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.78□□□□□ -1.8
ABCD3P28288 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.78□□□□□ -1.8
ABCD3P28288 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.78□□□□□ -1.8
ABCD3P28288 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.78□□□□□ -1.8
ABCD3P28288 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.78□□□□□ -1.8
ABCD3P28288 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.78□□□□□ -1.8
ABCD3P28288 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.78□□□□□ -1.8
ABCD3P28288 AC020914.4-201ENST00000597690 277 ntBASIC3.78□□□□□ -1.8
ABCD3P28288 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
ABCD3P28288 AC012065.4-201ENST00000602445 679 ntBASIC3.78□□□□□ -1.8
ABCD3P28288 Z94722.1-201ENST00000604328 474 ntBASIC3.78□□□□□ -1.8
ABCD3P28288 AC004067.1-201ENST00000608733 700 ntBASIC3.78□□□□□ -1.8
ABCD3P28288 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.78□□□□□ -1.8
ABCD3P28288 AC027807.2-201ENST00000616099 408 ntBASIC3.78□□□□□ -1.8
ABCD3P28288 AL731566.2-201ENST00000618971 317 ntBASIC3.78□□□□□ -1.8
ABCD3P28288 AC012150.2-201ENST00000621300 544 ntBASIC3.78□□□□□ -1.8
ABCD3P28288 AC008785.1-201ENST00000624475 456 ntBASIC3.78□□□□□ -1.8
ABCD3P28288 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.78□□□□□ -1.8
ABCD3P28288 AC025048.6-202ENST00000627667 438 ntBASIC3.78□□□□□ -1.8
ABCD3P28288 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
ABCD3P28288 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
ABCD3P28288 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.78□□□□□ -1.8
ABCD3P28288 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.78□□□□□ -1.8
ABCD3P28288 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
ABCD3P28288 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
ABCD3P28288 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
ABCD3P28288 LINC02471-203ENST00000641941 4752 ntBASIC3.78□□□□□ -1.81
ABCD3P28288 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.77□□□□□ -1.81
ABCD3P28288 Z82217.1-201ENST00000625157 8149 ntBASIC3.77□□□□□ -1.81
ABCD3P28288 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
ABCD3P28288 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.77□□□□□ -1.81
ABCD3P28288 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
ABCD3P28288 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
ABCD3P28288 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.77□□□□□ -1.81
ABCD3P28288 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.77□□□□□ -1.81
ABCD3P28288 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
ABCD3P28288 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.77□□□□□ -1.81
ABCD3P28288 MIR19A-201ENST00000384878 82 ntBASIC3.77□□□□□ -1.81
ABCD3P28288 RPS20P2-201ENST00000402520 389 ntBASIC3.77□□□□□ -1.81
ABCD3P28288 HSPE1P12-201ENST00000412576 301 ntBASIC3.77□□□□□ -1.81
ABCD3P28288 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.77□□□□□ -1.81
ABCD3P28288 AL356095.1-201ENST00000417217 199 ntBASIC3.77□□□□□ -1.81
ABCD3P28288 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.77□□□□□ -1.81
ABCD3P28288 CYP4F29P-201ENST00000420685 446 ntBASIC3.77□□□□□ -1.81
ABCD3P28288 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.77□□□□□ -1.81
ABCD3P28288 AL353777.1-201ENST00000425552 326 ntBASIC3.77□□□□□ -1.81
ABCD3P28288 AL358472.1-201ENST00000431295 329 ntBASIC3.77□□□□□ -1.81
ABCD3P28288 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.77□□□□□ -1.81
ABCD3P28288 AL049734.2-201ENST00000441066 616 ntBASIC3.77□□□□□ -1.81
ABCD3P28288 RPS4XP4-201ENST00000443195 763 ntBASIC3.77□□□□□ -1.81
ABCD3P28288 RPL21P133-201ENST00000443666 476 ntBASIC3.77□□□□□ -1.81
ABCD3P28288 RNU7-59P-201ENST00000459101 61 ntBASIC3.77□□□□□ -1.81
ABCD3P28288 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms