Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.16□□□□□ -1.9
XRCC1P18887 SNORA31.20-201ENST00000517111 133 ntBASIC3.16□□□□□ -1.9
XRCC1P18887 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.16□□□□□ -1.9
XRCC1P18887 EEF1B2P4-201ENST00000551398 348 ntBASIC3.16□□□□□ -1.9
XRCC1P18887 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.16□□□□□ -1.9
XRCC1P18887 AL163153.1-201ENST00000554223 283 ntBASIC3.16□□□□□ -1.9
XRCC1P18887 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.16□□□□□ -1.9
XRCC1P18887 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.16□□□□□ -1.9
XRCC1P18887 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.16□□□□□ -1.9
XRCC1P18887 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.16□□□□□ -1.9
XRCC1P18887 BNIP3P24-201ENST00000593398 557 ntBASIC3.16□□□□□ -1.9
XRCC1P18887 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.16□□□□□ -1.9
XRCC1P18887 AC091953.5-201ENST00000622919 233 ntBASIC3.16□□□□□ -1.9
XRCC1P18887 AC073348.1-201ENST00000623002 331 ntBASIC3.16□□□□□ -1.9
XRCC1P18887 AP001002.2-201ENST00000625137 386 ntBASIC3.16□□□□□ -1.9
XRCC1P18887 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.16□□□□□ -1.9
XRCC1P18887 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
XRCC1P18887 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.16□□□□□ -1.9
XRCC1P18887 CDR1-202ENST00000625883 1485 ntBASIC3.16□□□□□ -1.9
XRCC1P18887 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.15□□□□□ -1.9
XRCC1P18887 MTND5P24-201ENST00000438892 1767 ntBASIC3.15□□□□□ -1.9
XRCC1P18887 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
XRCC1P18887 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
XRCC1P18887 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
XRCC1P18887 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
XRCC1P18887 U3.29-201ENST00000391296 212 ntBASIC3.15□□□□□ -1.91
XRCC1P18887 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.15□□□□□ -1.91
XRCC1P18887 RPL32P35-201ENST00000415214 394 ntBASIC3.15□□□□□ -1.91
XRCC1P18887 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.15□□□□□ -1.91
XRCC1P18887 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC3.15□□□□□ -1.91
XRCC1P18887 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC3.15□□□□□ -1.91
XRCC1P18887 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.15□□□□□ -1.91
XRCC1P18887 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.15□□□□□ -1.91
XRCC1P18887 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
XRCC1P18887 Z99127.3-201ENST00000448158 395 ntBASIC3.15□□□□□ -1.91
XRCC1P18887 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.15□□□□□ -1.91
XRCC1P18887 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC3.15□□□□□ -1.91
XRCC1P18887 ARPC3P2-201ENST00000457786 533 ntBASIC3.15□□□□□ -1.91
XRCC1P18887 AC010285.1-201ENST00000470580 392 ntBASIC3.15□□□□□ -1.91
XRCC1P18887 RPS3AP43-201ENST00000479743 781 ntBASIC3.15□□□□□ -1.91
XRCC1P18887 RPS4XP13-201ENST00000483219 789 ntBASIC3.15□□□□□ -1.91
XRCC1P18887 AL024509.2-201ENST00000493462 493 ntBASIC3.15□□□□□ -1.91
XRCC1P18887 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
XRCC1P18887 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.15□□□□□ -1.91
XRCC1P18887 AC010625.1-201ENST00000511296 403 ntBASIC3.15□□□□□ -1.91
XRCC1P18887 RN7SKP244-201ENST00000516513 307 ntBASIC3.15□□□□□ -1.91
XRCC1P18887 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.15□□□□□ -1.91
XRCC1P18887 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.15□□□□□ -1.91
XRCC1P18887 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.15□□□□□ -1.91
XRCC1P18887 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.15□□□□□ -1.91
XRCC1P18887 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.15□□□□□ -1.91
XRCC1P18887 OR4H12P-201ENST00000556269 907 ntBASIC3.15□□□□□ -1.91
XRCC1P18887 MIR2682-201ENST00000580305 110 ntBASIC3.15□□□□□ -1.91
XRCC1P18887 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.15□□□□□ -1.91
XRCC1P18887 VN1R83P-201ENST00000595685 445 ntBASIC3.15□□□□□ -1.91
XRCC1P18887 AC055876.5-201ENST00000605667 259 ntBASIC3.15□□□□□ -1.91
XRCC1P18887 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
XRCC1P18887 AC016877.3-201ENST00000606778 504 ntBASIC3.15□□□□□ -1.91
XRCC1P18887 AL121652.1-201ENST00000608851 448 ntBASIC3.15□□□□□ -1.91
XRCC1P18887 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.15□□□□□ -1.91
XRCC1P18887 AC138932.5-201ENST00000617759 563 ntBASIC3.15□□□□□ -1.91
XRCC1P18887 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.15□□□□□ -1.91
XRCC1P18887 AL121895.2-201ENST00000619558 447 ntBASIC3.15□□□□□ -1.91
XRCC1P18887 AC040168.1-201ENST00000623594 991 ntBASIC3.15□□□□□ -1.91
XRCC1P18887 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.15□□□□□ -1.91
XRCC1P18887 LINC02211-204ENST00000642024 1070 ntBASIC3.15□□□□□ -1.91
XRCC1P18887 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
XRCC1P18887 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
XRCC1P18887 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
XRCC1P18887 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
XRCC1P18887 AC110774.1-201ENST00000623567 2018 ntBASIC3.14□□□□□ -1.91
XRCC1P18887 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.14□□□□□ -1.91
XRCC1P18887 SNORD116-12-201ENST00000384468 92 ntBASIC3.14□□□□□ -1.91
XRCC1P18887 RNU2-42P-201ENST00000410697 113 ntBASIC3.14□□□□□ -1.91
XRCC1P18887 RNA5SP229-201ENST00000410809 99 ntBASIC3.14□□□□□ -1.91
XRCC1P18887 MTATP6P20-201ENST00000414147 562 ntBASIC3.14□□□□□ -1.91
XRCC1P18887 AC099677.1-201ENST00000420575 175 ntBASIC3.14□□□□□ -1.91
XRCC1P18887 HMGN2P20-201ENST00000437531 273 ntBASIC3.14□□□□□ -1.91
XRCC1P18887 AL031313.1-201ENST00000448435 256 ntBASIC3.14□□□□□ -1.91
XRCC1P18887 USP9YP34-201ENST00000453983 808 ntBASIC3.14□□□□□ -1.91
XRCC1P18887 ST13P14-201ENST00000474095 734 ntBASIC3.14□□□□□ -1.91
XRCC1P18887 AC012181.1-201ENST00000479895 423 ntBASIC3.14□□□□□ -1.91
XRCC1P18887 WDR78-207ENST00000488333 613 ntTSL 3 BASIC3.14□□□□□ -1.91
XRCC1P18887 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.14□□□□□ -1.91
XRCC1P18887 RPL23AP55-201ENST00000498163 452 ntBASIC3.14□□□□□ -1.91
XRCC1P18887 DSTNP2-201ENST00000504533 515 ntBASIC3.14□□□□□ -1.91
XRCC1P18887 POU5F1P7-201ENST00000508759 541 ntBASIC3.14□□□□□ -1.91
XRCC1P18887 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.14□□□□□ -1.91
XRCC1P18887 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.14□□□□□ -1.91
XRCC1P18887 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.14□□□□□ -1.91
XRCC1P18887 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.14□□□□□ -1.91
XRCC1P18887 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.14□□□□□ -1.91
XRCC1P18887 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.14□□□□□ -1.91
XRCC1P18887 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.14□□□□□ -1.91
XRCC1P18887 MTND3P13-201ENST00000574391 343 ntBASIC3.14□□□□□ -1.91
XRCC1P18887 SNORD84-203ENST00000584275 78 ntBASIC3.14□□□□□ -1.91
XRCC1P18887 AC010738.1-201ENST00000604970 987 ntBASIC3.14□□□□□ -1.91
XRCC1P18887 CYCSP41-201ENST00000616920 296 ntBASIC3.14□□□□□ -1.91
XRCC1P18887 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
XRCC1P18887 AC018692.3-201ENST00000623929 123 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 153.2 ms