Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.6□□□□□ -1.83
PDGFRAP16234 RNA5SP468-201ENST00000516782 93 ntBASIC3.6□□□□□ -1.83
PDGFRAP16234 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.6□□□□□ -1.83
PDGFRAP16234 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.6□□□□□ -1.83
PDGFRAP16234 MIR3944-201ENST00000581277 108 ntBASIC3.6□□□□□ -1.83
PDGFRAP16234 AC006270.3-201ENST00000605967 1036 ntBASIC3.6□□□□□ -1.83
PDGFRAP16234 RNVU1-4-201ENST00000612985 164 ntBASIC3.6□□□□□ -1.83
PDGFRAP16234 AL355810.1-201ENST00000614629 552 ntBASIC3.6□□□□□ -1.83
PDGFRAP16234 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.6□□□□□ -1.83
PDGFRAP16234 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
PDGFRAP16234 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.6□□□□□ -1.83
PDGFRAP16234 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PDGFRAP16234 AC118273.1-201ENST00000525324 3006 ntBASIC3.59□□□□□ -1.83
PDGFRAP16234 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.59□□□□□ -1.83
PDGFRAP16234 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.59□□□□□ -1.83
PDGFRAP16234 SNORD17-201ENST00000390930 237 ntBASIC3.59□□□□□ -1.83
PDGFRAP16234 RNU2-47P-201ENST00000410649 186 ntBASIC3.59□□□□□ -1.83
PDGFRAP16234 MTCYBP38-201ENST00000417160 1123 ntBASIC3.59□□□□□ -1.83
PDGFRAP16234 AL953862.1-201ENST00000423016 168 ntBASIC3.59□□□□□ -1.83
PDGFRAP16234 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.59□□□□□ -1.83
PDGFRAP16234 RPS25P9-201ENST00000435591 252 ntBASIC3.59□□□□□ -1.83
PDGFRAP16234 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.59□□□□□ -1.83
PDGFRAP16234 SDCBPP1-201ENST00000440192 890 ntBASIC3.59□□□□□ -1.83
PDGFRAP16234 FGF7P5-201ENST00000441829 291 ntBASIC3.59□□□□□ -1.83
PDGFRAP16234 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PDGFRAP16234 HMGB3P8-201ENST00000449709 577 ntBASIC3.59□□□□□ -1.83
PDGFRAP16234 NECAP1P2-201ENST00000455668 727 ntBASIC3.59□□□□□ -1.83
PDGFRAP16234 ARPC3P2-201ENST00000457786 533 ntBASIC3.59□□□□□ -1.83
PDGFRAP16234 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.59□□□□□ -1.83
PDGFRAP16234 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.59□□□□□ -1.83
PDGFRAP16234 RPL31P50-201ENST00000471002 296 ntBASIC3.59□□□□□ -1.83
PDGFRAP16234 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PDGFRAP16234 KLHL2P1-201ENST00000508691 521 ntBASIC3.59□□□□□ -1.83
PDGFRAP16234 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.59□□□□□ -1.83
PDGFRAP16234 CR383656.7-201ENST00000548164 174 ntBASIC3.59□□□□□ -1.83
PDGFRAP16234 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.59□□□□□ -1.83
PDGFRAP16234 MIR5186-201ENST00000577504 120 ntBASIC3.59□□□□□ -1.83
PDGFRAP16234 MIR4425-201ENST00000580572 84 ntBASIC3.59□□□□□ -1.83
PDGFRAP16234 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.59□□□□□ -1.83
PDGFRAP16234 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.59□□□□□ -1.83
PDGFRAP16234 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.59□□□□□ -1.83
PDGFRAP16234 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.59□□□□□ -1.83
PDGFRAP16234 AL592221.1-201ENST00000605266 382 ntBASIC3.59□□□□□ -1.83
PDGFRAP16234 AL390208.1-201ENST00000605885 644 ntBASIC3.59□□□□□ -1.83
PDGFRAP16234 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.59□□□□□ -1.83
PDGFRAP16234 AL445264.1-201ENST00000621719 171 ntBASIC3.59□□□□□ -1.83
PDGFRAP16234 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PDGFRAP16234 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PDGFRAP16234 DDX43P2-201ENST00000604753 1354 ntBASIC3.59□□□□□ -1.83
PDGFRAP16234 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.59□□□□□ -1.83
PDGFRAP16234 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
PDGFRAP16234 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
PDGFRAP16234 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
PDGFRAP16234 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
PDGFRAP16234 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PDGFRAP16234 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PDGFRAP16234 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.58□□□□□ -1.84
PDGFRAP16234 AC093908.1-201ENST00000623125 8092 ntBASIC3.58□□□□□ -1.84
PDGFRAP16234 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
PDGFRAP16234 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PDGFRAP16234 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PDGFRAP16234 DEFB109C-201ENST00000382575 264 ntBASIC3.58□□□□□ -1.84
PDGFRAP16234 DEFB109B-201ENST00000382656 264 ntBASIC3.58□□□□□ -1.84
PDGFRAP16234 RNU6-952P-201ENST00000391164 108 ntBASIC3.58□□□□□ -1.84
PDGFRAP16234 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.58□□□□□ -1.84
PDGFRAP16234 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PDGFRAP16234 Z99755.1-201ENST00000414048 380 ntBASIC3.58□□□□□ -1.84
PDGFRAP16234 AL137014.1-201ENST00000420490 1226 ntBASIC3.58□□□□□ -1.84
PDGFRAP16234 MTCO1P39-201ENST00000426148 480 ntBASIC3.58□□□□□ -1.84
PDGFRAP16234 AC079780.1-201ENST00000428259 207 ntBASIC3.58□□□□□ -1.84
PDGFRAP16234 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.58□□□□□ -1.84
PDGFRAP16234 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.58□□□□□ -1.84
PDGFRAP16234 Z80107.1-201ENST00000436830 412 ntBASIC3.58□□□□□ -1.84
PDGFRAP16234 MTND3P1-201ENST00000441336 220 ntBASIC3.58□□□□□ -1.84
PDGFRAP16234 AC097262.1-201ENST00000452559 548 ntBASIC3.58□□□□□ -1.84
PDGFRAP16234 USP9YP10-201ENST00000454868 628 ntBASIC3.58□□□□□ -1.84
PDGFRAP16234 RPL23AP67-201ENST00000465341 474 ntBASIC3.58□□□□□ -1.84
PDGFRAP16234 AC108729.1-201ENST00000487812 947 ntBASIC3.58□□□□□ -1.84
PDGFRAP16234 MLLT10P2-201ENST00000506434 249 ntBASIC3.58□□□□□ -1.84
PDGFRAP16234 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.58□□□□□ -1.84
PDGFRAP16234 AC110760.3-202ENST00000515177 371 ntBASIC3.58□□□□□ -1.84
PDGFRAP16234 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.58□□□□□ -1.84
PDGFRAP16234 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.58□□□□□ -1.84
PDGFRAP16234 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.58□□□□□ -1.84
PDGFRAP16234 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.58□□□□□ -1.84
PDGFRAP16234 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.58□□□□□ -1.84
PDGFRAP16234 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.58□□□□□ -1.84
PDGFRAP16234 AC006557.5-201ENST00000603126 811 ntBASIC3.58□□□□□ -1.84
PDGFRAP16234 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.58□□□□□ -1.84
PDGFRAP16234 AC004853.1-201ENST00000604902 698 ntBASIC3.58□□□□□ -1.84
PDGFRAP16234 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.58□□□□□ -1.84
PDGFRAP16234 AC110801.1-201ENST00000623590 212 ntBASIC3.58□□□□□ -1.84
PDGFRAP16234 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
PDGFRAP16234 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.58□□□□□ -1.84
PDGFRAP16234 AL022578.1-201ENST00000439330 1433 ntBASIC3.58□□□□□ -1.84
PDGFRAP16234 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
PDGFRAP16234 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.58□□□□□ -1.84
PDGFRAP16234 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.58□□□□□ -1.84
PDGFRAP16234 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.58□□□□□ -1.84
PDGFRAP16234 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms