Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.63□□□□□ -1.67
HLA-DOAP06340 RAB11AP2-201ENST00000545905 639 ntBASIC4.63□□□□□ -1.67
HLA-DOAP06340 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.63□□□□□ -1.67
HLA-DOAP06340 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.63□□□□□ -1.67
HLA-DOAP06340 FGF7P1-201ENST00000582820 288 ntBASIC4.63□□□□□ -1.67
HLA-DOAP06340 MAGOH2P-202ENST00000584384 429 ntBASIC4.63□□□□□ -1.67
HLA-DOAP06340 BNIP3P9-201ENST00000603714 553 ntBASIC4.63□□□□□ -1.67
HLA-DOAP06340 AC112187.2-201ENST00000604345 283 ntBASIC4.63□□□□□ -1.67
HLA-DOAP06340 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.63□□□□□ -1.67
HLA-DOAP06340 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.63□□□□□ -1.67
HLA-DOAP06340 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC4.63□□□□□ -1.67
HLA-DOAP06340 AC108479.2-201ENST00000617314 601 ntBASIC4.63□□□□□ -1.67
HLA-DOAP06340 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.63□□□□□ -1.67
HLA-DOAP06340 AC009268.2-201ENST00000621925 457 ntBASIC4.63□□□□□ -1.67
HLA-DOAP06340 AC004009.2-201ENST00000623016 728 ntBASIC4.63□□□□□ -1.67
HLA-DOAP06340 AC012442.3-202ENST00000636742 206 ntBASIC4.63□□□□□ -1.67
HLA-DOAP06340 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DOAP06340 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.63□□□□□ -1.67
HLA-DOAP06340 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DOAP06340 AC117529.2-201ENST00000512159 2068 ntBASIC4.63□□□□□ -1.67
HLA-DOAP06340 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DOAP06340 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DOAP06340 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DOAP06340 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DOAP06340 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.62□□□□□ -1.67
HLA-DOAP06340 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DOAP06340 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DOAP06340 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
HLA-DOAP06340 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DOAP06340 RNU6-1293P-201ENST00000384077 107 ntBASIC4.62□□□□□ -1.67
HLA-DOAP06340 RNU6-769P-201ENST00000384407 104 ntBASIC4.62□□□□□ -1.67
HLA-DOAP06340 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.62□□□□□ -1.67
HLA-DOAP06340 MIR320C1-201ENST00000408566 88 ntBASIC4.62□□□□□ -1.67
HLA-DOAP06340 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DOAP06340 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.62□□□□□ -1.67
HLA-DOAP06340 AL451062.2-201ENST00000427515 271 ntBASIC4.62□□□□□ -1.67
HLA-DOAP06340 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC4.62□□□□□ -1.67
HLA-DOAP06340 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DOAP06340 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.62□□□□□ -1.67
HLA-DOAP06340 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DOAP06340 AC091153.1-201ENST00000466297 402 ntBASIC4.62□□□□□ -1.67
HLA-DOAP06340 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DOAP06340 AC034236.1-201ENST00000469891 373 ntBASIC4.62□□□□□ -1.67
HLA-DOAP06340 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.62□□□□□ -1.67
HLA-DOAP06340 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.62□□□□□ -1.67
HLA-DOAP06340 RNA5SP216-201ENST00000516111 123 ntBASIC4.62□□□□□ -1.67
HLA-DOAP06340 RNU6-875P-201ENST00000516488 106 ntBASIC4.62□□□□□ -1.67
HLA-DOAP06340 RNA5SP143-201ENST00000516936 115 ntBASIC4.62□□□□□ -1.67
HLA-DOAP06340 AC124068.1-201ENST00000563131 678 ntBASIC4.62□□□□□ -1.67
HLA-DOAP06340 AL391840.1-201ENST00000571144 367 ntBASIC4.62□□□□□ -1.67
HLA-DOAP06340 MTND6P33-201ENST00000571794 183 ntBASIC4.62□□□□□ -1.67
HLA-DOAP06340 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.62□□□□□ -1.67
HLA-DOAP06340 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.62□□□□□ -1.67
HLA-DOAP06340 AL049634.3-201ENST00000604968 457 ntBASIC4.62□□□□□ -1.67
HLA-DOAP06340 AC016727.1-205ENST00000605437 569 ntBASIC4.62□□□□□ -1.67
HLA-DOAP06340 AL591424.2-201ENST00000617023 128 ntBASIC4.62□□□□□ -1.67
HLA-DOAP06340 MIR6075-201ENST00000620782 95 ntBASIC4.62□□□□□ -1.67
HLA-DOAP06340 RNU6-156P-201ENST00000621869 107 ntBASIC4.62□□□□□ -1.67
HLA-DOAP06340 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.62□□□□□ -1.67
HLA-DOAP06340 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DOAP06340 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DOAP06340 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.62□□□□□ -1.67
HLA-DOAP06340 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.62□□□□□ -1.67
HLA-DOAP06340 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.62□□□□□ -1.67
HLA-DOAP06340 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DOAP06340 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DOAP06340 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DOAP06340 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DOAP06340 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.61□□□□□ -1.67
HLA-DOAP06340 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.61□□□□□ -1.67
HLA-DOAP06340 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.61□□□□□ -1.67
HLA-DOAP06340 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.61□□□□□ -1.67
HLA-DOAP06340 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DOAP06340 Y_RNA.61-201ENST00000362835 102 ntBASIC4.61□□□□□ -1.67
HLA-DOAP06340 Y_RNA.295-201ENST00000364918 102 ntBASIC4.61□□□□□ -1.67
HLA-DOAP06340 Y_RNA.402-201ENST00000383972 102 ntBASIC4.61□□□□□ -1.67
HLA-DOAP06340 U1.1-201ENST00000384101 164 ntBASIC4.61□□□□□ -1.67
HLA-DOAP06340 RNU6-952P-201ENST00000391164 108 ntBASIC4.61□□□□□ -1.67
HLA-DOAP06340 ARF4P3-201ENST00000397387 509 ntBASIC4.61□□□□□ -1.67
HLA-DOAP06340 RNU2-41P-201ENST00000410991 178 ntBASIC4.61□□□□□ -1.67
HLA-DOAP06340 OR51A5P-201ENST00000415429 942 ntBASIC4.61□□□□□ -1.67
HLA-DOAP06340 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DOAP06340 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.61□□□□□ -1.67
HLA-DOAP06340 HMGB1P37-201ENST00000439613 609 ntBASIC4.61□□□□□ -1.67
HLA-DOAP06340 AC069285.2-201ENST00000440210 275 ntBASIC4.61□□□□□ -1.67
HLA-DOAP06340 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.61□□□□□ -1.67
HLA-DOAP06340 NANOGP10-201ENST00000453325 895 ntBASIC4.61□□□□□ -1.67
HLA-DOAP06340 RPS15AP17-201ENST00000470598 390 ntBASIC4.61□□□□□ -1.67
HLA-DOAP06340 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.61□□□□□ -1.67
HLA-DOAP06340 STMN1P2-201ENST00000508435 439 ntBASIC4.61□□□□□ -1.67
HLA-DOAP06340 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DOAP06340 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.61□□□□□ -1.67
HLA-DOAP06340 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.61□□□□□ -1.67
HLA-DOAP06340 AC046134.1-201ENST00000514454 666 ntBASIC4.61□□□□□ -1.67
HLA-DOAP06340 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.61□□□□□ -1.67
HLA-DOAP06340 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.61□□□□□ -1.67
HLA-DOAP06340 AP001893.2-201ENST00000526949 202 ntBASIC4.61□□□□□ -1.67
HLA-DOAP06340 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DOAP06340 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.61□□□□□ -1.67
HLA-DOAP06340 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms