Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.69□□□□□ -1.98
APOEP02649 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.69□□□□□ -1.98
APOEP02649 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.69□□□□□ -1.98
APOEP02649 AC010625.1-201ENST00000511296 403 ntBASIC2.69□□□□□ -1.98
APOEP02649 AC026412.2-201ENST00000512270 1075 ntBASIC2.69□□□□□ -1.98
APOEP02649 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.69□□□□□ -1.98
APOEP02649 RNU6-202P-201ENST00000515998 96 ntBASIC2.69□□□□□ -1.98
APOEP02649 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.69□□□□□ -1.98
APOEP02649 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC2.69□□□□□ -1.98
APOEP02649 ERHP1-201ENST00000523006 310 ntBASIC2.69□□□□□ -1.98
APOEP02649 AC087373.1-201ENST00000524920 491 ntBASIC2.69□□□□□ -1.98
APOEP02649 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.69□□□□□ -1.98
APOEP02649 OR7K1P-201ENST00000546439 926 ntBASIC2.69□□□□□ -1.98
APOEP02649 NOP56P3-201ENST00000549457 385 ntBASIC2.69□□□□□ -1.98
APOEP02649 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC2.69□□□□□ -1.98
APOEP02649 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.69□□□□□ -1.98
APOEP02649 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.69□□□□□ -1.98
APOEP02649 AC090312.2-201ENST00000582687 378 ntBASIC2.69□□□□□ -1.98
APOEP02649 AC018618.2-201ENST00000604770 446 ntBASIC2.69□□□□□ -1.98
APOEP02649 AC024560.3-201ENST00000608482 349 ntBASIC2.69□□□□□ -1.98
APOEP02649 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.69□□□□□ -1.98
APOEP02649 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.69□□□□□ -1.98
APOEP02649 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.68□□□□□ -1.98
APOEP02649 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
APOEP02649 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
APOEP02649 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
APOEP02649 SNORA25.6-201ENST00000364121 118 ntBASIC2.68□□□□□ -1.98
APOEP02649 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
APOEP02649 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.68□□□□□ -1.98
APOEP02649 USP9YP20-201ENST00000419224 558 ntBASIC2.68□□□□□ -1.98
APOEP02649 AC073310.1-201ENST00000423226 1033 ntBASIC2.68□□□□□ -1.98
APOEP02649 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.68□□□□□ -1.98
APOEP02649 AC114973.1-201ENST00000429057 632 ntBASIC2.68□□□□□ -1.98
APOEP02649 SUMO1P4-201ENST00000429430 302 ntBASIC2.68□□□□□ -1.98
APOEP02649 PTP4A1P3-201ENST00000433661 420 ntBASIC2.68□□□□□ -1.98
APOEP02649 UBE2V1P5-201ENST00000440070 405 ntBASIC2.68□□□□□ -1.98
APOEP02649 AC068135.1-201ENST00000446164 246 ntBASIC2.68□□□□□ -1.98
APOEP02649 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.68□□□□□ -1.98
APOEP02649 CACYBPP2-201ENST00000453625 678 ntBASIC2.68□□□□□ -1.98
APOEP02649 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.68□□□□□ -1.98
APOEP02649 RPL37P25-201ENST00000507308 276 ntBASIC2.68□□□□□ -1.98
APOEP02649 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.68□□□□□ -1.98
APOEP02649 RPPH1-2P-201ENST00000516688 293 ntBASIC2.68□□□□□ -1.98
APOEP02649 AC123904.3-201ENST00000547218 814 ntBASIC2.68□□□□□ -1.98
APOEP02649 AL391156.1-201ENST00000554965 554 ntBASIC2.68□□□□□ -1.98
APOEP02649 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.68□□□□□ -1.98
APOEP02649 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC2.68□□□□□ -1.98
APOEP02649 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC2.68□□□□□ -1.98
APOEP02649 AC022387.2-201ENST00000604050 448 ntBASIC2.68□□□□□ -1.98
APOEP02649 AC140725.3-201ENST00000616193 880 ntBASIC2.68□□□□□ -1.98
APOEP02649 AC018926.3-201ENST00000618841 406 ntBASIC2.68□□□□□ -1.98
APOEP02649 AL356118.1-201ENST00000635272 1078 ntBASIC2.68□□□□□ -1.98
APOEP02649 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.68□□□□□ -1.98
APOEP02649 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
APOEP02649 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.68□□□□□ -1.98
APOEP02649 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
APOEP02649 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.67□□□□□ -1.98
APOEP02649 RNU6-1249P-201ENST00000363237 111 ntBASIC2.67□□□□□ -1.98
APOEP02649 RNU6-799P-201ENST00000363567 107 ntBASIC2.67□□□□□ -1.98
APOEP02649 RNU6-339P-201ENST00000384310 107 ntBASIC2.67□□□□□ -1.98
APOEP02649 RNA5SP210-201ENST00000391034 120 ntBASIC2.67□□□□□ -1.98
APOEP02649 AL031679.1-201ENST00000400616 525 ntBASIC2.67□□□□□ -1.98
APOEP02649 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.67□□□□□ -1.98
APOEP02649 MTCO3P12-201ENST00000416718 547 ntBASIC2.67□□□□□ -1.98
APOEP02649 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
APOEP02649 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.67□□□□□ -1.98
APOEP02649 RNA5SP310-201ENST00000459084 116 ntBASIC2.67□□□□□ -1.98
APOEP02649 RPL31P50-201ENST00000471002 296 ntBASIC2.67□□□□□ -1.98
APOEP02649 AC093663.2-201ENST00000484625 313 ntBASIC2.67□□□□□ -1.98
APOEP02649 SRIP1-201ENST00000489235 288 ntBASIC2.67□□□□□ -1.98
APOEP02649 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC2.67□□□□□ -1.98
APOEP02649 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.67□□□□□ -1.98
APOEP02649 AC103783.1-201ENST00000520506 373 ntBASIC2.67□□□□□ -1.98
APOEP02649 AC027309.2-201ENST00000520566 192 ntBASIC2.67□□□□□ -1.98
APOEP02649 AC243972.3-201ENST00000539655 198 ntBASIC2.67□□□□□ -1.98
APOEP02649 NBEAP1-201ENST00000554452 979 ntBASIC2.67□□□□□ -1.98
APOEP02649 CKS1BP1-201ENST00000555221 240 ntBASIC2.67□□□□□ -1.98
APOEP02649 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.67□□□□□ -1.98
APOEP02649 AC025588.3-201ENST00000604182 274 ntBASIC2.67□□□□□ -1.98
APOEP02649 AL133507.1-201ENST00000605269 557 ntBASIC2.67□□□□□ -1.98
APOEP02649 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.67□□□□□ -1.98
APOEP02649 AC092650.2-201ENST00000619984 902 ntBASIC2.67□□□□□ -1.98
APOEP02649 MIR6852-201ENST00000621699 66 ntBASIC2.67□□□□□ -1.98
APOEP02649 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
APOEP02649 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.67□□□□□ -1.98
APOEP02649 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.67□□□□□ -1.98
APOEP02649 ZNF271P-202ENST00000465539 1970 ntBASIC2.67□□□□□ -1.98
APOEP02649 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.66□□□□□ -1.98
APOEP02649 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
APOEP02649 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.66□□□□□ -1.98
APOEP02649 SSXP10-201ENST00000402595 565 ntBASIC2.66□□□□□ -1.98
APOEP02649 AL512504.1-201ENST00000415494 778 ntBASIC2.66□□□□□ -1.98
APOEP02649 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.66□□□□□ -1.98
APOEP02649 AL606495.1-201ENST00000422100 813 ntBASIC2.66□□□□□ -1.98
APOEP02649 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.66□□□□□ -1.98
APOEP02649 AC079780.1-201ENST00000428259 207 ntBASIC2.66□□□□□ -1.98
APOEP02649 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC2.66□□□□□ -1.98
APOEP02649 MTND2P21-201ENST00000436242 1042 ntBASIC2.66□□□□□ -1.98
APOEP02649 AC073901.1-201ENST00000462471 408 ntBASIC2.66□□□□□ -1.98
APOEP02649 AC126182.1-201ENST00000478134 357 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms