Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 AC024560.2-201ENST00000507981 1497 ntBASIC3.99□□□□□ -1.77
RTN3O95197 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.99□□□□□ -1.77
RTN3O95197 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RTN3O95197 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.99□□□□□ -1.77
RTN3O95197 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
RTN3O95197 RNU6-1207P-201ENST00000384343 107 ntBASIC3.99□□□□□ -1.77
RTN3O95197 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
RTN3O95197 EI24P2-201ENST00000397776 1076 ntBASIC3.99□□□□□ -1.77
RTN3O95197 RPS3AP26-201ENST00000398259 784 ntBASIC3.99□□□□□ -1.77
RTN3O95197 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RTN3O95197 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RTN3O95197 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.99□□□□□ -1.77
RTN3O95197 AC011233.1-201ENST00000422812 283 ntBASIC3.99□□□□□ -1.77
RTN3O95197 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RTN3O95197 AL593851.1-201ENST00000426171 157 ntBASIC3.99□□□□□ -1.77
RTN3O95197 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.99□□□□□ -1.77
RTN3O95197 MTND1P20-201ENST00000430341 950 ntBASIC3.99□□□□□ -1.77
RTN3O95197 AC087650.1-201ENST00000431445 468 ntBASIC3.99□□□□□ -1.77
RTN3O95197 RPL7P34-201ENST00000433316 712 ntBASIC3.99□□□□□ -1.77
RTN3O95197 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC3.99□□□□□ -1.77
RTN3O95197 HMGB1P12-201ENST00000438594 598 ntBASIC3.99□□□□□ -1.77
RTN3O95197 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.99□□□□□ -1.77
RTN3O95197 CFTRP1-201ENST00000456646 183 ntBASIC3.99□□□□□ -1.77
RTN3O95197 RPS3AP22-201ENST00000488297 769 ntBASIC3.99□□□□□ -1.77
RTN3O95197 AC106872.3-201ENST00000495104 446 ntBASIC3.99□□□□□ -1.77
RTN3O95197 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.99□□□□□ -1.77
RTN3O95197 AC017037.2-201ENST00000513850 890 ntBASIC3.99□□□□□ -1.77
RTN3O95197 AC034159.1-201ENST00000513885 583 ntBASIC3.99□□□□□ -1.77
RTN3O95197 RN7SKP289-201ENST00000517244 295 ntBASIC3.99□□□□□ -1.77
RTN3O95197 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.99□□□□□ -1.77
RTN3O95197 IGKV2D-19-201ENST00000523346 262 ntBASIC3.99□□□□□ -1.77
RTN3O95197 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.99□□□□□ -1.77
RTN3O95197 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.99□□□□□ -1.77
RTN3O95197 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.99□□□□□ -1.77
RTN3O95197 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC3.99□□□□□ -1.77
RTN3O95197 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RTN3O95197 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RTN3O95197 AC018638.7-201ENST00000605836 1114 ntBASIC3.99□□□□□ -1.77
RTN3O95197 AL121772.2-201ENST00000614331 297 ntBASIC3.99□□□□□ -1.77
RTN3O95197 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.99□□□□□ -1.77
RTN3O95197 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RTN3O95197 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
RTN3O95197 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RTN3O95197 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
RTN3O95197 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
RTN3O95197 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RTN3O95197 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RTN3O95197 AL672167.1-206ENST00000356293 943 ntBASIC3.98□□□□□ -1.77
RTN3O95197 RNU6-173P-201ENST00000364215 104 ntBASIC3.98□□□□□ -1.77
RTN3O95197 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.98□□□□□ -1.77
RTN3O95197 U8.11-201ENST00000384699 133 ntBASIC3.98□□□□□ -1.77
RTN3O95197 U8.12-201ENST00000384701 133 ntBASIC3.98□□□□□ -1.77
RTN3O95197 MIR200C-201ENST00000384980 68 ntBASIC3.98□□□□□ -1.77
RTN3O95197 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
RTN3O95197 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RTN3O95197 MTCO1P17-201ENST00000411522 491 ntBASIC3.98□□□□□ -1.77
RTN3O95197 RPL23AP39-201ENST00000415533 405 ntBASIC3.98□□□□□ -1.77
RTN3O95197 CCDC58P2-201ENST00000417131 366 ntBASIC3.98□□□□□ -1.77
RTN3O95197 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.98□□□□□ -1.77
RTN3O95197 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.98□□□□□ -1.77
RTN3O95197 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC3.98□□□□□ -1.77
RTN3O95197 CYCSP43-201ENST00000438233 310 ntBASIC3.98□□□□□ -1.77
RTN3O95197 LSM1P1-201ENST00000438629 273 ntBASIC3.98□□□□□ -1.77
RTN3O95197 SNORD121B-201ENST00000458838 81 ntBASIC3.98□□□□□ -1.77
RTN3O95197 U8.18-201ENST00000459285 133 ntBASIC3.98□□□□□ -1.77
RTN3O95197 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.98□□□□□ -1.77
RTN3O95197 AC072039.1-201ENST00000477611 581 ntBASIC3.98□□□□□ -1.77
RTN3O95197 UBE2CP3-201ENST00000502715 450 ntBASIC3.98□□□□□ -1.77
RTN3O95197 AC026784.1-201ENST00000507986 352 ntBASIC3.98□□□□□ -1.77
RTN3O95197 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.98□□□□□ -1.77
RTN3O95197 HMGN1P11-201ENST00000508668 303 ntBASIC3.98□□□□□ -1.77
RTN3O95197 POU5F1P7-201ENST00000508759 541 ntBASIC3.98□□□□□ -1.77
RTN3O95197 LTV1P1-201ENST00000510683 1237 ntBASIC3.98□□□□□ -1.77
RTN3O95197 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.98□□□□□ -1.77
RTN3O95197 TRMT10BP1-201ENST00000519377 943 ntBASIC3.98□□□□□ -1.77
RTN3O95197 AC103783.1-201ENST00000520506 373 ntBASIC3.98□□□□□ -1.77
RTN3O95197 SNRPGP16-201ENST00000533275 226 ntBASIC3.98□□□□□ -1.77
RTN3O95197 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RTN3O95197 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.98□□□□□ -1.77
RTN3O95197 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.98□□□□□ -1.77
RTN3O95197 FAM60BP-201ENST00000578364 658 ntBASIC3.98□□□□□ -1.77
RTN3O95197 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.98□□□□□ -1.77
RTN3O95197 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.98□□□□□ -1.77
RTN3O95197 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.98□□□□□ -1.77
RTN3O95197 AC013444.2-201ENST00000603317 787 ntBASIC3.98□□□□□ -1.77
RTN3O95197 AL360219.1-201ENST00000610230 366 ntBASIC3.98□□□□□ -1.77
RTN3O95197 AC002550.2-201ENST00000621246 394 ntBASIC3.98□□□□□ -1.77
RTN3O95197 AP003485.2-201ENST00000623636 610 ntBASIC3.98□□□□□ -1.77
RTN3O95197 AC120349.3-201ENST00000624377 529 ntBASIC3.98□□□□□ -1.77
RTN3O95197 U6.98-201ENST00000637157 84 ntBASIC3.98□□□□□ -1.77
RTN3O95197 AC007671.2-201ENST00000637344 619 ntBASIC3.98□□□□□ -1.77
RTN3O95197 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RTN3O95197 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RTN3O95197 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RTN3O95197 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
RTN3O95197 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RTN3O95197 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RTN3O95197 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
RTN3O95197 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.97□□□□□ -1.77
RTN3O95197 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms