Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
GPC4O75487 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
GPC4O75487 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.71□□□□□ -1.81
GPC4O75487 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
GPC4O75487 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
GPC4O75487 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
GPC4O75487 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
GPC4O75487 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
GPC4O75487 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
GPC4O75487 AL161781.1-201ENST00000354277 403 ntBASIC3.71□□□□□ -1.82
GPC4O75487 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
GPC4O75487 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
GPC4O75487 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.71□□□□□ -1.82
GPC4O75487 RNU6-1207P-201ENST00000384343 107 ntBASIC3.71□□□□□ -1.82
GPC4O75487 TPMTP3-201ENST00000411928 735 ntBASIC3.71□□□□□ -1.82
GPC4O75487 HMGB1P11-201ENST00000413899 637 ntBASIC3.71□□□□□ -1.82
GPC4O75487 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.71□□□□□ -1.82
GPC4O75487 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.71□□□□□ -1.82
GPC4O75487 RPS29P7-201ENST00000439662 171 ntBASIC3.71□□□□□ -1.82
GPC4O75487 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.71□□□□□ -1.82
GPC4O75487 AC006480.1-201ENST00000449887 378 ntBASIC3.71□□□□□ -1.82
GPC4O75487 CFTRP1-201ENST00000456646 183 ntBASIC3.71□□□□□ -1.82
GPC4O75487 UBDP1-202ENST00000457888 382 ntBASIC3.71□□□□□ -1.82
GPC4O75487 snoU13.24-201ENST00000458998 104 ntBASIC3.71□□□□□ -1.82
GPC4O75487 AC010285.1-201ENST00000470580 392 ntBASIC3.71□□□□□ -1.82
GPC4O75487 RN7SL132P-201ENST00000478131 296 ntBASIC3.71□□□□□ -1.82
GPC4O75487 POU5F1P7-201ENST00000508759 541 ntBASIC3.71□□□□□ -1.82
GPC4O75487 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.71□□□□□ -1.82
GPC4O75487 TXNP6-201ENST00000510190 310 ntBASIC3.71□□□□□ -1.82
GPC4O75487 AC010486.3-201ENST00000511602 785 ntBASIC3.71□□□□□ -1.82
GPC4O75487 NPM1P41-201ENST00000512920 831 ntBASIC3.71□□□□□ -1.82
GPC4O75487 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.71□□□□□ -1.82
GPC4O75487 RNA5SP208-201ENST00000516156 78 ntBASIC3.71□□□□□ -1.82
GPC4O75487 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.71□□□□□ -1.82
GPC4O75487 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.71□□□□□ -1.82
GPC4O75487 AC022695.1-201ENST00000522089 237 ntBASIC3.71□□□□□ -1.82
GPC4O75487 MTCO1P47-201ENST00000523889 1271 ntBASIC3.71□□□□□ -1.82
GPC4O75487 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
GPC4O75487 AP004247.1-201ENST00000531556 1289 ntBASIC3.71□□□□□ -1.82
GPC4O75487 CR383656.7-201ENST00000548164 174 ntBASIC3.71□□□□□ -1.82
GPC4O75487 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.71□□□□□ -1.82
GPC4O75487 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.71□□□□□ -1.82
GPC4O75487 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.71□□□□□ -1.82
GPC4O75487 AC087499.8-201ENST00000578406 226 ntBASIC3.71□□□□□ -1.82
GPC4O75487 OR4K8P-201ENST00000578842 1048 ntBASIC3.71□□□□□ -1.82
GPC4O75487 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.71□□□□□ -1.82
GPC4O75487 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.71□□□□□ -1.82
GPC4O75487 AL020997.2-201ENST00000602607 184 ntBASIC3.71□□□□□ -1.82
GPC4O75487 DUXAP11-201ENST00000603858 526 ntBASIC3.71□□□□□ -1.82
GPC4O75487 BCRP9-201ENST00000605312 388 ntBASIC3.71□□□□□ -1.82
GPC4O75487 AL451086.1-201ENST00000605596 223 ntBASIC3.71□□□□□ -1.82
GPC4O75487 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.71□□□□□ -1.82
GPC4O75487 AC008121.2-201ENST00000614647 523 ntBASIC3.71□□□□□ -1.82
GPC4O75487 AL590099.1-201ENST00000615276 138 ntBASIC3.71□□□□□ -1.82
GPC4O75487 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.71□□□□□ -1.82
GPC4O75487 U6.98-201ENST00000637157 84 ntBASIC3.71□□□□□ -1.82
GPC4O75487 PWAR6-201ENST00000552334 4618 ntBASIC3.71□□□□□ -1.82
GPC4O75487 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.71□□□□□ -1.82
GPC4O75487 AL645937.1-201ENST00000641739 1652 ntBASIC3.71□□□□□ -1.82
GPC4O75487 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
GPC4O75487 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
GPC4O75487 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
GPC4O75487 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
GPC4O75487 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
GPC4O75487 CR383658.2-201ENST00000547576 1525 ntBASIC3.7□□□□□ -1.82
GPC4O75487 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
GPC4O75487 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.7□□□□□ -1.82
GPC4O75487 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
GPC4O75487 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
GPC4O75487 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
GPC4O75487 SOD2P1-201ENST00000396543 562 ntBASIC3.7□□□□□ -1.82
GPC4O75487 AL356421.1-201ENST00000403255 413 ntBASIC3.7□□□□□ -1.82
GPC4O75487 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.7□□□□□ -1.82
GPC4O75487 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.7□□□□□ -1.82
GPC4O75487 EI24P1-201ENST00000416584 867 ntBASIC3.7□□□□□ -1.82
GPC4O75487 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.7□□□□□ -1.82
GPC4O75487 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.7□□□□□ -1.82
GPC4O75487 AL591419.1-201ENST00000427423 339 ntBASIC3.7□□□□□ -1.82
GPC4O75487 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.7□□□□□ -1.82
GPC4O75487 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.7□□□□□ -1.82
GPC4O75487 MTATP6P26-201ENST00000445926 662 ntBASIC3.7□□□□□ -1.82
GPC4O75487 EPS15P1-201ENST00000448836 336 ntBASIC3.7□□□□□ -1.82
GPC4O75487 RPS27AP8-201ENST00000452665 445 ntBASIC3.7□□□□□ -1.82
GPC4O75487 KATNBL1P6-201ENST00000453433 915 ntBASIC3.7□□□□□ -1.82
GPC4O75487 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.7□□□□□ -1.82
GPC4O75487 ST13P14-201ENST00000474095 734 ntBASIC3.7□□□□□ -1.82
GPC4O75487 AC104563.1-201ENST00000476147 376 ntBASIC3.7□□□□□ -1.82
GPC4O75487 AP001086.1-201ENST00000494882 321 ntBASIC3.7□□□□□ -1.82
GPC4O75487 RPL23AP55-201ENST00000498163 452 ntBASIC3.7□□□□□ -1.82
GPC4O75487 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.7□□□□□ -1.82
GPC4O75487 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.7□□□□□ -1.82
GPC4O75487 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.7□□□□□ -1.82
GPC4O75487 MED28P5-201ENST00000528254 438 ntBASIC3.7□□□□□ -1.82
GPC4O75487 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.7□□□□□ -1.82
GPC4O75487 AL121576.1-201ENST00000556055 276 ntBASIC3.7□□□□□ -1.82
GPC4O75487 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.7□□□□□ -1.82
GPC4O75487 AC034268.2-201ENST00000571784 482 ntBASIC3.7□□□□□ -1.82
GPC4O75487 MIR5685-201ENST00000579080 79 ntBASIC3.7□□□□□ -1.82
GPC4O75487 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.7□□□□□ -1.82
GPC4O75487 AP001004.1-201ENST00000582468 324 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms