Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AL355810.1-201ENST00000614629 552 ntBASIC3.55□□□□□ -1.84
CCDC188H7C350 AC011330.2-201ENST00000621680 635 ntBASIC3.55□□□□□ -1.84
CCDC188H7C350 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC188H7C350 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC188H7C350 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC188H7C350 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC188H7C350 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.54□□□□□ -1.84
CCDC188H7C350 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.54□□□□□ -1.84
CCDC188H7C350 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC188H7C350 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC188H7C350 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC188H7C350 Y_RNA.234-201ENST00000364409 97 ntBASIC3.54□□□□□ -1.84
CCDC188H7C350 RNA5SP283-201ENST00000365604 119 ntBASIC3.54□□□□□ -1.84
CCDC188H7C350 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
CCDC188H7C350 RNU6-157P-201ENST00000383957 107 ntBASIC3.54□□□□□ -1.84
CCDC188H7C350 AP000567.1-201ENST00000406413 156 ntBASIC3.54□□□□□ -1.84
CCDC188H7C350 MIR320C1-201ENST00000408566 88 ntBASIC3.54□□□□□ -1.84
CCDC188H7C350 RN7SKP111-201ENST00000410349 271 ntBASIC3.54□□□□□ -1.84
CCDC188H7C350 ATP5A1P2-201ENST00000412323 255 ntBASIC3.54□□□□□ -1.84
CCDC188H7C350 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC188H7C350 RPL22P18-201ENST00000417197 377 ntBASIC3.54□□□□□ -1.84
CCDC188H7C350 SSXP9-201ENST00000417503 292 ntBASIC3.54□□□□□ -1.84
CCDC188H7C350 BEND7P1-201ENST00000422058 457 ntBASIC3.54□□□□□ -1.84
CCDC188H7C350 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.54□□□□□ -1.84
CCDC188H7C350 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.54□□□□□ -1.84
CCDC188H7C350 OR4C10P-201ENST00000434991 931 ntBASIC3.54□□□□□ -1.84
CCDC188H7C350 AC004866.2-201ENST00000438285 481 ntBASIC3.54□□□□□ -1.84
CCDC188H7C350 RABEPKP1-201ENST00000440529 1026 ntBASIC3.54□□□□□ -1.84
CCDC188H7C350 AL353691.1-201ENST00000451332 387 ntBASIC3.54□□□□□ -1.84
CCDC188H7C350 AC104563.1-201ENST00000476147 376 ntBASIC3.54□□□□□ -1.84
CCDC188H7C350 AC078785.3-201ENST00000476607 425 ntBASIC3.54□□□□□ -1.84
CCDC188H7C350 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.54□□□□□ -1.84
CCDC188H7C350 VN1R105P-201ENST00000486595 910 ntBASIC3.54□□□□□ -1.84
CCDC188H7C350 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.54□□□□□ -1.84
CCDC188H7C350 AC093677.1-201ENST00000514414 678 ntBASIC3.54□□□□□ -1.84
CCDC188H7C350 SNORA70.18-201ENST00000516696 98 ntBASIC3.54□□□□□ -1.84
CCDC188H7C350 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC188H7C350 AC103783.1-201ENST00000520506 373 ntBASIC3.54□□□□□ -1.84
CCDC188H7C350 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.54□□□□□ -1.84
CCDC188H7C350 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC188H7C350 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC188H7C350 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.54□□□□□ -1.84
CCDC188H7C350 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.54□□□□□ -1.84
CCDC188H7C350 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC188H7C350 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.54□□□□□ -1.84
CCDC188H7C350 AC037471.2-201ENST00000564941 598 ntBASIC3.54□□□□□ -1.84
CCDC188H7C350 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.54□□□□□ -1.84
CCDC188H7C350 MIR5047-201ENST00000579212 100 ntBASIC3.54□□□□□ -1.84
CCDC188H7C350 MIR4286-201ENST00000580651 93 ntBASIC3.54□□□□□ -1.84
CCDC188H7C350 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.54□□□□□ -1.84
CCDC188H7C350 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.54□□□□□ -1.84
CCDC188H7C350 AC006557.5-201ENST00000603126 811 ntBASIC3.54□□□□□ -1.84
CCDC188H7C350 AC011451.2-201ENST00000604303 598 ntBASIC3.54□□□□□ -1.84
CCDC188H7C350 AC025588.2-201ENST00000604851 466 ntBASIC3.54□□□□□ -1.84
CCDC188H7C350 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.54□□□□□ -1.84
CCDC188H7C350 AL451086.1-201ENST00000605596 223 ntBASIC3.54□□□□□ -1.84
CCDC188H7C350 AC092354.2-201ENST00000607786 514 ntBASIC3.54□□□□□ -1.84
CCDC188H7C350 AC034229.4-201ENST00000607861 441 ntBASIC3.54□□□□□ -1.84
CCDC188H7C350 AC107294.3-201ENST00000609211 526 ntBASIC3.54□□□□□ -1.84
CCDC188H7C350 MIR6875-201ENST00000617506 72 ntBASIC3.54□□□□□ -1.84
CCDC188H7C350 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.54□□□□□ -1.84
CCDC188H7C350 MFSD8-236ENST00000641509 4050 ntBASIC3.54□□□□□ -1.84
CCDC188H7C350 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC188H7C350 SRP72P2-201ENST00000344851 1979 ntBASIC3.54□□□□□ -1.84
CCDC188H7C350 AC116096.1-201ENST00000566804 2314 ntBASIC3.54□□□□□ -1.84
CCDC188H7C350 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC188H7C350 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.53□□□□□ -1.84
CCDC188H7C350 DDX43P2-201ENST00000604753 1354 ntBASIC3.53□□□□□ -1.84
CCDC188H7C350 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC188H7C350 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC188H7C350 RNU6-882P-201ENST00000391025 103 ntBASIC3.53□□□□□ -1.84
CCDC188H7C350 AC007066.1-201ENST00000392902 381 ntBASIC3.53□□□□□ -1.84
CCDC188H7C350 AC025750.1-201ENST00000399891 379 ntBASIC3.53□□□□□ -1.84
CCDC188H7C350 PPIAP31-201ENST00000405422 495 ntBASIC3.53□□□□□ -1.84
CCDC188H7C350 AL445189.1-201ENST00000405722 338 ntBASIC3.53□□□□□ -1.84
CCDC188H7C350 RNU2-43P-201ENST00000410306 190 ntBASIC3.53□□□□□ -1.84
CCDC188H7C350 RNU6-628P-201ENST00000410675 107 ntBASIC3.53□□□□□ -1.84
CCDC188H7C350 RPS24P7-201ENST00000416921 246 ntBASIC3.53□□□□□ -1.84
CCDC188H7C350 DBIP2-201ENST00000419076 262 ntBASIC3.53□□□□□ -1.84
CCDC188H7C350 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC188H7C350 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC188H7C350 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC188H7C350 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC188H7C350 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.53□□□□□ -1.84
CCDC188H7C350 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC188H7C350 FTH1P1-201ENST00000437933 532 ntBASIC3.53□□□□□ -1.84
CCDC188H7C350 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC188H7C350 MTND5P14-201ENST00000441481 1267 ntBASIC3.53□□□□□ -1.84
CCDC188H7C350 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.53□□□□□ -1.84
CCDC188H7C350 EEF1E1P1-201ENST00000446998 430 ntBASIC3.53□□□□□ -1.84
CCDC188H7C350 Z99127.3-201ENST00000448158 395 ntBASIC3.53□□□□□ -1.84
CCDC188H7C350 RSL24D1P3-201ENST00000449255 495 ntBASIC3.53□□□□□ -1.84
CCDC188H7C350 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC3.53□□□□□ -1.84
CCDC188H7C350 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.53□□□□□ -1.84
CCDC188H7C350 RPL31P50-201ENST00000471002 296 ntBASIC3.53□□□□□ -1.84
CCDC188H7C350 AL049830.2-201ENST00000480072 201 ntBASIC3.53□□□□□ -1.84
CCDC188H7C350 AC112198.1-201ENST00000505369 1220 ntBASIC3.53□□□□□ -1.84
CCDC188H7C350 AC104090.1-201ENST00000506341 1171 ntBASIC3.53□□□□□ -1.84
CCDC188H7C350 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.53□□□□□ -1.84
CCDC188H7C350 PHBP14-201ENST00000512887 367 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms