Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC105272.1-201ENST00000438604 198 ntBASIC2.87□□□□□ -1.95
TMX2-CTNND1H3BSU7 MTCYBP42-201ENST00000444653 1130 ntBASIC2.87□□□□□ -1.95
TMX2-CTNND1H3BSU7 AL358794.1-201ENST00000445689 381 ntBASIC2.87□□□□□ -1.95
TMX2-CTNND1H3BSU7 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
TMX2-CTNND1H3BSU7 RPL7P59-201ENST00000447700 943 ntBASIC2.87□□□□□ -1.95
TMX2-CTNND1H3BSU7 EXOSC3P1-201ENST00000448649 500 ntBASIC2.87□□□□□ -1.95
TMX2-CTNND1H3BSU7 GTF2IP9-201ENST00000502460 301 ntBASIC2.87□□□□□ -1.95
TMX2-CTNND1H3BSU7 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.87□□□□□ -1.95
TMX2-CTNND1H3BSU7 MTND4LP22-201ENST00000508209 276 ntBASIC2.87□□□□□ -1.95
TMX2-CTNND1H3BSU7 AC008837.1-201ENST00000511513 412 ntBASIC2.87□□□□□ -1.95
TMX2-CTNND1H3BSU7 HIGD1AP6-201ENST00000521833 279 ntBASIC2.87□□□□□ -1.95
TMX2-CTNND1H3BSU7 MTCO3P15-201ENST00000526563 574 ntBASIC2.87□□□□□ -1.95
TMX2-CTNND1H3BSU7 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC2.87□□□□□ -1.95
TMX2-CTNND1H3BSU7 DEFB130C-202ENST00000530001 230 ntBASIC2.87□□□□□ -1.95
TMX2-CTNND1H3BSU7 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.87□□□□□ -1.95
TMX2-CTNND1H3BSU7 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.87□□□□□ -1.95
TMX2-CTNND1H3BSU7 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
TMX2-CTNND1H3BSU7 NF1P5-201ENST00000588287 448 ntBASIC2.87□□□□□ -1.95
TMX2-CTNND1H3BSU7 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.87□□□□□ -1.95
TMX2-CTNND1H3BSU7 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.87□□□□□ -1.95
TMX2-CTNND1H3BSU7 AC002487.1-201ENST00000604565 994 ntBASIC2.87□□□□□ -1.95
TMX2-CTNND1H3BSU7 AC105148.1-201ENST00000604961 409 ntBASIC2.87□□□□□ -1.95
TMX2-CTNND1H3BSU7 AC004832.5-201ENST00000608677 401 ntBASIC2.87□□□□□ -1.95
TMX2-CTNND1H3BSU7 AP005137.2-201ENST00000609238 400 ntBASIC2.87□□□□□ -1.95
TMX2-CTNND1H3BSU7 AL050303.3-201ENST00000613704 284 ntBASIC2.87□□□□□ -1.95
TMX2-CTNND1H3BSU7 AC006065.5-201ENST00000623427 349 ntBASIC2.87□□□□□ -1.95
TMX2-CTNND1H3BSU7 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.87□□□□□ -1.95
TMX2-CTNND1H3BSU7 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC2.87□□□□□ -1.95
TMX2-CTNND1H3BSU7 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
TMX2-CTNND1H3BSU7 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
TMX2-CTNND1H3BSU7 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.87□□□□□ -1.95
TMX2-CTNND1H3BSU7 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.87□□□□□ -1.95
TMX2-CTNND1H3BSU7 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.86□□□□□ -1.95
TMX2-CTNND1H3BSU7 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
TMX2-CTNND1H3BSU7 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.86□□□□□ -1.95
TMX2-CTNND1H3BSU7 FTLP6-201ENST00000355274 422 ntBASIC2.86□□□□□ -1.95
TMX2-CTNND1H3BSU7 RNU4-51P-201ENST00000364206 140 ntBASIC2.86□□□□□ -1.95
TMX2-CTNND1H3BSU7 SNORA51.2-201ENST00000364595 132 ntBASIC2.86□□□□□ -1.95
TMX2-CTNND1H3BSU7 U8.9-201ENST00000365667 134 ntBASIC2.86□□□□□ -1.95
TMX2-CTNND1H3BSU7 MIR217-201ENST00000384817 110 ntBASIC2.86□□□□□ -1.95
TMX2-CTNND1H3BSU7 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
TMX2-CTNND1H3BSU7 AGR3-202ENST00000402239 563 ntTSL 2 BASIC2.86□□□□□ -1.95
TMX2-CTNND1H3BSU7 BTF3P8-201ENST00000414577 526 ntBASIC2.86□□□□□ -1.95
TMX2-CTNND1H3BSU7 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.86□□□□□ -1.95
TMX2-CTNND1H3BSU7 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.86□□□□□ -1.95
TMX2-CTNND1H3BSU7 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
TMX2-CTNND1H3BSU7 RPL21P40-201ENST00000428586 483 ntBASIC2.86□□□□□ -1.95
TMX2-CTNND1H3BSU7 SAR1AP4-201ENST00000429225 591 ntBASIC2.86□□□□□ -1.95
TMX2-CTNND1H3BSU7 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
TMX2-CTNND1H3BSU7 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.86□□□□□ -1.95
TMX2-CTNND1H3BSU7 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.86□□□□□ -1.95
TMX2-CTNND1H3BSU7 AL592437.1-201ENST00000443781 492 ntBASIC2.86□□□□□ -1.95
TMX2-CTNND1H3BSU7 HMGB1P48-201ENST00000446155 598 ntBASIC2.86□□□□□ -1.95
TMX2-CTNND1H3BSU7 COX6CP18-201ENST00000448769 222 ntBASIC2.86□□□□□ -1.95
TMX2-CTNND1H3BSU7 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.86□□□□□ -1.95
TMX2-CTNND1H3BSU7 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2.86□□□□□ -1.95
TMX2-CTNND1H3BSU7 AC117440.1-201ENST00000474107 571 ntBASIC2.86□□□□□ -1.95
TMX2-CTNND1H3BSU7 RPL9P33-201ENST00000484311 566 ntBASIC2.86□□□□□ -1.95
TMX2-CTNND1H3BSU7 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
TMX2-CTNND1H3BSU7 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.86□□□□□ -1.95
TMX2-CTNND1H3BSU7 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.86□□□□□ -1.95
TMX2-CTNND1H3BSU7 RN7SKP43-201ENST00000516173 320 ntBASIC2.86□□□□□ -1.95
TMX2-CTNND1H3BSU7 snoZ278.1-201ENST00000517059 112 ntBASIC2.86□□□□□ -1.95
TMX2-CTNND1H3BSU7 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.86□□□□□ -1.95
TMX2-CTNND1H3BSU7 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.86□□□□□ -1.95
TMX2-CTNND1H3BSU7 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.86□□□□□ -1.95
TMX2-CTNND1H3BSU7 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.86□□□□□ -1.95
TMX2-CTNND1H3BSU7 AC005951.1-201ENST00000576706 485 ntBASIC2.86□□□□□ -1.95
TMX2-CTNND1H3BSU7 AC138761.3-201ENST00000579993 334 ntBASIC2.86□□□□□ -1.95
TMX2-CTNND1H3BSU7 MIR4760-201ENST00000585040 80 ntBASIC2.86□□□□□ -1.95
TMX2-CTNND1H3BSU7 AC073387.2-201ENST00000604797 784 ntBASIC2.86□□□□□ -1.95
TMX2-CTNND1H3BSU7 AL392112.1-201ENST00000605115 829 ntBASIC2.86□□□□□ -1.95
TMX2-CTNND1H3BSU7 AC009237.15-201ENST00000610252 501 ntBASIC2.86□□□□□ -1.95
TMX2-CTNND1H3BSU7 AC107871.2-201ENST00000612894 502 ntBASIC2.86□□□□□ -1.95
TMX2-CTNND1H3BSU7 AL121895.2-201ENST00000619558 447 ntBASIC2.86□□□□□ -1.95
TMX2-CTNND1H3BSU7 AC123767.1-202ENST00000620407 817 ntBASIC2.86□□□□□ -1.95
TMX2-CTNND1H3BSU7 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
TMX2-CTNND1H3BSU7 AL078595.3-201ENST00000623815 1166 ntBASIC2.86□□□□□ -1.95
TMX2-CTNND1H3BSU7 AL109659.3-201ENST00000624985 950 ntBASIC2.86□□□□□ -1.95
TMX2-CTNND1H3BSU7 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
TMX2-CTNND1H3BSU7 MTND5P3-201ENST00000438536 1800 ntBASIC2.86□□□□□ -1.95
TMX2-CTNND1H3BSU7 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.86□□□□□ -1.95
TMX2-CTNND1H3BSU7 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.85□□□□□ -1.95
TMX2-CTNND1H3BSU7 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.85□□□□□ -1.95
TMX2-CTNND1H3BSU7 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.85□□□□□ -1.95
TMX2-CTNND1H3BSU7 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.85□□□□□ -1.95
TMX2-CTNND1H3BSU7 SAGE4P-201ENST00000442271 3381 ntBASIC2.85□□□□□ -1.95
TMX2-CTNND1H3BSU7 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.85□□□□□ -1.95
TMX2-CTNND1H3BSU7 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
TMX2-CTNND1H3BSU7 SNORA9.2-201ENST00000365361 133 ntBASIC2.85□□□□□ -1.95
TMX2-CTNND1H3BSU7 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.85□□□□□ -1.95
TMX2-CTNND1H3BSU7 SNORA51.12-201ENST00000384448 134 ntBASIC2.85□□□□□ -1.95
TMX2-CTNND1H3BSU7 MIR153-1-201ENST00000384914 90 ntBASIC2.85□□□□□ -1.95
TMX2-CTNND1H3BSU7 MIR525-201ENST00000384978 85 ntBASIC2.85□□□□□ -1.95
TMX2-CTNND1H3BSU7 SNORA26.7-201ENST00000391288 122 ntBASIC2.85□□□□□ -1.95
TMX2-CTNND1H3BSU7 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
TMX2-CTNND1H3BSU7 RNA5SP274-201ENST00000410484 108 ntBASIC2.85□□□□□ -1.95
TMX2-CTNND1H3BSU7 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.85□□□□□ -1.95
TMX2-CTNND1H3BSU7 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.85□□□□□ -1.95
TMX2-CTNND1H3BSU7 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms