Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.91□□□□□ -1.94
TRIM49D1C9J1S8 RNU6-839P-201ENST00000363347 108 ntBASIC2.91□□□□□ -1.94
TRIM49D1C9J1S8 RNA5SP267-201ENST00000364893 126 ntBASIC2.91□□□□□ -1.94
TRIM49D1C9J1S8 Y_RNA.333-201ENST00000365274 102 ntBASIC2.91□□□□□ -1.94
TRIM49D1C9J1S8 RNU6-1151P-201ENST00000384684 107 ntBASIC2.91□□□□□ -1.94
TRIM49D1C9J1S8 AL139098.1-201ENST00000407291 389 ntBASIC2.91□□□□□ -1.94
TRIM49D1C9J1S8 LUZP4P1-201ENST00000415420 344 ntBASIC2.91□□□□□ -1.94
TRIM49D1C9J1S8 BOLA3P4-201ENST00000418151 400 ntBASIC2.91□□□□□ -1.94
TRIM49D1C9J1S8 DUTP6-201ENST00000425573 462 ntBASIC2.91□□□□□ -1.94
TRIM49D1C9J1S8 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC2.91□□□□□ -1.94
TRIM49D1C9J1S8 RPL31P54-201ENST00000429803 370 ntBASIC2.91□□□□□ -1.94
TRIM49D1C9J1S8 HMGB1P48-201ENST00000446155 598 ntBASIC2.91□□□□□ -1.94
TRIM49D1C9J1S8 RPL37P4-201ENST00000448908 268 ntBASIC2.91□□□□□ -1.94
TRIM49D1C9J1S8 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.91□□□□□ -1.94
TRIM49D1C9J1S8 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.91□□□□□ -1.94
TRIM49D1C9J1S8 AC068587.2-201ENST00000478386 781 ntBASIC2.91□□□□□ -1.94
TRIM49D1C9J1S8 AL358832.1-201ENST00000497800 389 ntBASIC2.91□□□□□ -1.94
TRIM49D1C9J1S8 HSPD1P15-201ENST00000505573 1122 ntBASIC2.91□□□□□ -1.94
TRIM49D1C9J1S8 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC2.91□□□□□ -1.94
TRIM49D1C9J1S8 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC2.91□□□□□ -1.94
TRIM49D1C9J1S8 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.91□□□□□ -1.94
TRIM49D1C9J1S8 RNY4P37-201ENST00000516225 96 ntBASIC2.91□□□□□ -1.94
TRIM49D1C9J1S8 RN7SKP272-201ENST00000516988 232 ntBASIC2.91□□□□□ -1.94
TRIM49D1C9J1S8 HIGD1AP6-201ENST00000521833 279 ntBASIC2.91□□□□□ -1.94
TRIM49D1C9J1S8 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.91□□□□□ -1.94
TRIM49D1C9J1S8 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.91□□□□□ -1.94
TRIM49D1C9J1S8 AP000790.1-201ENST00000528891 737 ntBASIC2.91□□□□□ -1.94
TRIM49D1C9J1S8 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC2.91□□□□□ -1.94
TRIM49D1C9J1S8 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.91□□□□□ -1.94
TRIM49D1C9J1S8 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC2.91□□□□□ -1.94
TRIM49D1C9J1S8 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.91□□□□□ -1.94
TRIM49D1C9J1S8 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.91□□□□□ -1.94
TRIM49D1C9J1S8 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.91□□□□□ -1.94
TRIM49D1C9J1S8 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.91□□□□□ -1.94
TRIM49D1C9J1S8 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.91□□□□□ -1.94
TRIM49D1C9J1S8 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.91□□□□□ -1.94
TRIM49D1C9J1S8 MIR5680-201ENST00000577577 84 ntBASIC2.91□□□□□ -1.94
TRIM49D1C9J1S8 AC006504.3-201ENST00000586818 523 ntBASIC2.91□□□□□ -1.94
TRIM49D1C9J1S8 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.91□□□□□ -1.94
TRIM49D1C9J1S8 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.91□□□□□ -1.94
TRIM49D1C9J1S8 AC007566.2-201ENST00000603642 413 ntBASIC2.91□□□□□ -1.94
TRIM49D1C9J1S8 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC2.91□□□□□ -1.94
TRIM49D1C9J1S8 AC090115.4-201ENST00000609970 188 ntBASIC2.91□□□□□ -1.94
TRIM49D1C9J1S8 AC096577.2-201ENST00000611455 153 ntBASIC2.91□□□□□ -1.94
TRIM49D1C9J1S8 AL139418.1-201ENST00000613613 177 ntBASIC2.91□□□□□ -1.94
TRIM49D1C9J1S8 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
TRIM49D1C9J1S8 AC010338.1-201ENST00000621823 717 ntBASIC2.91□□□□□ -1.94
TRIM49D1C9J1S8 AC091953.5-201ENST00000622919 233 ntBASIC2.91□□□□□ -1.94
TRIM49D1C9J1S8 AC068787.1-201ENST00000623908 691 ntBASIC2.91□□□□□ -1.94
TRIM49D1C9J1S8 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.91□□□□□ -1.94
TRIM49D1C9J1S8 MIR6733-201ENST00000635723 61 ntBASIC2.91□□□□□ -1.94
TRIM49D1C9J1S8 AC087821.2-201ENST00000637086 450 ntBASIC2.91□□□□□ -1.94
TRIM49D1C9J1S8 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
TRIM49D1C9J1S8 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
TRIM49D1C9J1S8 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
TRIM49D1C9J1S8 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
TRIM49D1C9J1S8 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
TRIM49D1C9J1S8 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
TRIM49D1C9J1S8 AL512646.1-201ENST00000269395 1077 ntBASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 SNORA51.2-201ENST00000364595 132 ntBASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 MIR512-1-201ENST00000384913 84 ntBASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 MTCO2P31-201ENST00000402702 684 ntBASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 AL590084.1-201ENST00000407885 387 ntBASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 RPL23AP47-201ENST00000408017 460 ntBASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 RNA5SP80-201ENST00000410475 111 ntBASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 RNU2-42P-201ENST00000410697 113 ntBASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 XKRYP1-201ENST00000423438 492 ntBASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 AC005326.1-201ENST00000429197 123 ntBASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 MTCO1P3-201ENST00000429327 192 ntBASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 XKRYP2-201ENST00000432915 492 ntBASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 GTF2IP7-202ENST00000436677 309 ntBASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 MTND1P31-201ENST00000449206 961 ntBASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 SLC31A1P1-201ENST00000451221 567 ntBASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 HMGN2P16-201ENST00000456802 261 ntBASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 VN1R17P-201ENST00000472048 1090 ntBASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 AC011979.1-201ENST00000472300 483 ntBASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 NCOR1P1-202ENST00000486162 291 ntBASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 AC016065.2-201ENST00000514530 444 ntBASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 RPL12P22-201ENST00000519073 490 ntBASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 AP000857.1-201ENST00000532151 543 ntBASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 AC010198.2-201ENST00000550612 259 ntBASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 SYF2P1-201ENST00000550658 413 ntBASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 AC074029.1-201ENST00000552531 1044 ntBASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms