Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 U2.16-201ENST00000613119 191 ntBASIC1.28□□□□□ -2.2
LINC01546A6NGU7 U2.12-201ENST00000613778 191 ntBASIC1.28□□□□□ -2.2
LINC01546A6NGU7 U2.20-201ENST00000613956 192 ntBASIC1.28□□□□□ -2.2
LINC01546A6NGU7 U2.9-201ENST00000615427 191 ntBASIC1.28□□□□□ -2.2
LINC01546A6NGU7 U2.11-201ENST00000616345 191 ntBASIC1.28□□□□□ -2.2
LINC01546A6NGU7 U2.2-201ENST00000616535 191 ntBASIC1.28□□□□□ -2.2
LINC01546A6NGU7 U2.3-201ENST00000617785 191 ntBASIC1.28□□□□□ -2.2
LINC01546A6NGU7 U2.19-201ENST00000618602 191 ntBASIC1.28□□□□□ -2.2
LINC01546A6NGU7 RNU2-1-201ENST00000618664 191 ntBASIC1.28□□□□□ -2.2
LINC01546A6NGU7 U2.6-201ENST00000619225 191 ntBASIC1.28□□□□□ -2.2
LINC01546A6NGU7 U2.5-201ENST00000619465 191 ntBASIC1.28□□□□□ -2.2
LINC01546A6NGU7 U2.10-201ENST00000620268 191 ntBASIC1.28□□□□□ -2.2
LINC01546A6NGU7 DLD-214ENST00000639772 421 ntTSL 5 BASIC1.28□□□□□ -2.2
LINC01546A6NGU7 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.28□□□□□ -2.21
LINC01546A6NGU7 AC091564.4-201ENST00000533934 2194 ntBASIC1.27□□□□□ -2.21
LINC01546A6NGU7 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
LINC01546A6NGU7 SNORA7.2-201ENST00000364446 145 ntBASIC1.27□□□□□ -2.21
LINC01546A6NGU7 U3.12-201ENST00000364498 214 ntBASIC1.27□□□□□ -2.21
LINC01546A6NGU7 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
LINC01546A6NGU7 CYCSP45-201ENST00000402289 315 ntBASIC1.27□□□□□ -2.21
LINC01546A6NGU7 RNU2-20P-201ENST00000410425 191 ntBASIC1.27□□□□□ -2.21
LINC01546A6NGU7 SNORD56-201ENST00000413522 71 ntBASIC1.27□□□□□ -2.21
LINC01546A6NGU7 AC016769.2-201ENST00000414815 475 ntBASIC1.27□□□□□ -2.21
LINC01546A6NGU7 PGBD4P6-201ENST00000421501 610 ntBASIC1.27□□□□□ -2.21
LINC01546A6NGU7 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.27□□□□□ -2.21
LINC01546A6NGU7 USP9YP15-201ENST00000442391 422 ntBASIC1.27□□□□□ -2.21
LINC01546A6NGU7 RPS26P30-201ENST00000443431 335 ntBASIC1.27□□□□□ -2.21
LINC01546A6NGU7 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC1.27□□□□□ -2.21
LINC01546A6NGU7 AC007182.2-201ENST00000489251 402 ntBASIC1.27□□□□□ -2.21
LINC01546A6NGU7 AC034244.2-201ENST00000514668 858 ntBASIC1.27□□□□□ -2.21
LINC01546A6NGU7 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.27□□□□□ -2.21
LINC01546A6NGU7 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.27□□□□□ -2.21
LINC01546A6NGU7 OSBPL9P3-201ENST00000534523 595 ntBASIC1.27□□□□□ -2.21
LINC01546A6NGU7 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.27□□□□□ -2.21
LINC01546A6NGU7 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.27□□□□□ -2.21
LINC01546A6NGU7 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.27□□□□□ -2.21
LINC01546A6NGU7 AC067838.1-201ENST00000606064 577 ntBASIC1.27□□□□□ -2.21
LINC01546A6NGU7 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC1.27□□□□□ -2.21
LINC01546A6NGU7 AC244517.12-201ENST00000623581 663 ntBASIC1.27□□□□□ -2.21
LINC01546A6NGU7 MIR219B-201ENST00000637023 88 ntBASIC1.27□□□□□ -2.21
LINC01546A6NGU7 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
LINC01546A6NGU7 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC1.27□□□□□ -2.21
LINC01546A6NGU7 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC1.26□□□□□ -2.21
LINC01546A6NGU7 AL390862.1-201ENST00000635467 1469 ntBASIC1.26□□□□□ -2.21
LINC01546A6NGU7 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
LINC01546A6NGU7 RNA5SP289-201ENST00000362332 137 ntBASIC1.26□□□□□ -2.21
LINC01546A6NGU7 RNU1-73P-201ENST00000383971 164 ntBASIC1.26□□□□□ -2.21
LINC01546A6NGU7 MIR17-201ENST00000385012 84 ntBASIC1.26□□□□□ -2.21
LINC01546A6NGU7 MIR676-201ENST00000390702 67 ntBASIC1.26□□□□□ -2.21
LINC01546A6NGU7 AL356057.1-202ENST00000402263 756 ntBASIC1.26□□□□□ -2.21
LINC01546A6NGU7 AL023284.1-201ENST00000403956 276 ntBASIC1.26□□□□□ -2.21
LINC01546A6NGU7 Y_RNA.625-201ENST00000411256 107 ntBASIC1.26□□□□□ -2.21
LINC01546A6NGU7 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC1.26□□□□□ -2.21
LINC01546A6NGU7 AC008280.1-201ENST00000418851 412 ntBASIC1.26□□□□□ -2.21
LINC01546A6NGU7 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.26□□□□□ -2.21
LINC01546A6NGU7 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.26□□□□□ -2.21
LINC01546A6NGU7 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC1.26□□□□□ -2.21
LINC01546A6NGU7 MRPS33P4-201ENST00000434892 317 ntBASIC1.26□□□□□ -2.21
LINC01546A6NGU7 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.26□□□□□ -2.21
LINC01546A6NGU7 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.26□□□□□ -2.21
LINC01546A6NGU7 CDC27P1-201ENST00000445384 715 ntBASIC1.26□□□□□ -2.21
LINC01546A6NGU7 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.26□□□□□ -2.21
LINC01546A6NGU7 CAB39P1-201ENST00000502277 460 ntBASIC1.26□□□□□ -2.21
LINC01546A6NGU7 AC008565.1-201ENST00000509046 885 ntBASIC1.26□□□□□ -2.21
LINC01546A6NGU7 AP003122.3-201ENST00000526316 255 ntBASIC1.26□□□□□ -2.21
LINC01546A6NGU7 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC1.26□□□□□ -2.21
LINC01546A6NGU7 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
LINC01546A6NGU7 SETP7-201ENST00000552169 453 ntBASIC1.26□□□□□ -2.21
LINC01546A6NGU7 AC104581.2-201ENST00000572227 430 ntBASIC1.26□□□□□ -2.21
LINC01546A6NGU7 MIR4658-201ENST00000584344 65 ntBASIC1.26□□□□□ -2.21
LINC01546A6NGU7 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.26□□□□□ -2.21
LINC01546A6NGU7 PSMA6P4-201ENST00000603247 718 ntBASIC1.26□□□□□ -2.21
LINC01546A6NGU7 RPP40P2-201ENST00000603596 712 ntBASIC1.26□□□□□ -2.21
LINC01546A6NGU7 AC112503.1-201ENST00000608436 391 ntBASIC1.26□□□□□ -2.21
LINC01546A6NGU7 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.26□□□□□ -2.21
LINC01546A6NGU7 AL162233.1-201ENST00000620014 944 ntBASIC1.26□□□□□ -2.21
LINC01546A6NGU7 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC1.26□□□□□ -2.21
LINC01546A6NGU7 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
LINC01546A6NGU7 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.25□□□□□ -2.21
LINC01546A6NGU7 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
LINC01546A6NGU7 RNA5SP363-201ENST00000365072 115 ntBASIC1.25□□□□□ -2.21
LINC01546A6NGU7 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC1.25□□□□□ -2.21
LINC01546A6NGU7 RNU2-17P-201ENST00000410290 190 ntBASIC1.25□□□□□ -2.21
LINC01546A6NGU7 POLHP1-201ENST00000411806 470 ntBASIC1.25□□□□□ -2.21
LINC01546A6NGU7 AC241520.1-201ENST00000422654 1099 ntBASIC1.25□□□□□ -2.21
LINC01546A6NGU7 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.25□□□□□ -2.21
LINC01546A6NGU7 RPL35AP22-201ENST00000436855 335 ntBASIC1.25□□□□□ -2.21
LINC01546A6NGU7 AC009237.8-201ENST00000445492 379 ntBASIC1.25□□□□□ -2.21
LINC01546A6NGU7 HMGN1P8-201ENST00000463578 288 ntBASIC1.25□□□□□ -2.21
LINC01546A6NGU7 AC079203.1-201ENST00000487972 404 ntBASIC1.25□□□□□ -2.21
LINC01546A6NGU7 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
LINC01546A6NGU7 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
LINC01546A6NGU7 RN7SKP234-201ENST00000517173 224 ntBASIC1.25□□□□□ -2.21
LINC01546A6NGU7 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC1.25□□□□□ -2.21
LINC01546A6NGU7 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC1.25□□□□□ -2.21
LINC01546A6NGU7 AP001646.1-201ENST00000527936 915 ntBASIC1.25□□□□□ -2.21
LINC01546A6NGU7 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.25□□□□□ -2.21
LINC01546A6NGU7 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
LINC01546A6NGU7 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.25□□□□□ -2.21
LINC01546A6NGU7 OR4K8P-201ENST00000578842 1048 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms