Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 AC008489.1-201ENST00000524271 483 ntBASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 AL109766.1-201ENST00000555080 552 ntBASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 AL359219.2-201ENST00000555184 348 ntBASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 AL359212.1-201ENST00000556608 614 ntBASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 AC068135.2-201ENST00000569293 1028 ntBASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 FAM60BP-201ENST00000578364 658 ntBASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 FRG1KP-201ENST00000623592 341 ntBASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 AC067931.1-201ENST00000624190 671 ntBASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 AC010300.1-201ENST00000600671 5134 ntBASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
MBD3L4A6NDZ8 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.03□□□□□ -1.77
MBD3L4A6NDZ8 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 CPHL1P-201ENST00000461341 3407 ntBASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 OR51H2P-202ENST00000641424 3046 ntBASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 OR52B1P-201ENST00000316506 909 ntBASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 RNA5SP388-201ENST00000362584 119 ntBASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 Y_RNA.381-201ENST00000365666 102 ntBASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 RNU1-39P-201ENST00000383897 165 ntBASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 AL603766.1-201ENST00000407763 664 ntBASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 TMSB10P2-201ENST00000416049 131 ntBASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 USP9YP27-201ENST00000418455 438 ntBASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 PPP1R11P2-201ENST00000423543 382 ntBASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 RPS12P10-201ENST00000427031 377 ntBASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 MTND1P2-201ENST00000430604 821 ntBASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 AC024082.2-201ENST00000434771 238 ntBASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 RPS20P5-201ENST00000434808 360 ntBASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 RPL7P54-201ENST00000438336 674 ntBASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 RPS15AP9-201ENST00000439856 381 ntBASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 BNIP3P2-201ENST00000441221 577 ntBASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 SNORD97-201ENST00000459187 142 ntBASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 S100A11P1-201ENST00000477525 312 ntBASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 IGLVIV-65-201ENST00000517313 360 ntBASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 AC109635.3-201ENST00000529536 185 ntBASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 AC105233.3-201ENST00000531125 744 ntBASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 AL512310.1-201ENST00000548639 172 ntBASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 AL157687.1-201ENST00000554853 619 ntBASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 AC025678.1-201ENST00000567861 338 ntBASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 AC012182.1-201ENST00000570133 895 ntBASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 MIR3939-201ENST00000582614 106 ntBASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 AC007621.1-201ENST00000604544 437 ntBASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 AP001596.2-201ENST00000608410 312 ntBASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 SNHG22-203ENST00000617833 660 ntBASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 AC011944.2-201ENST00000624440 683 ntBASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 AC006065.6-201ENST00000625201 545 ntBASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 AC055839.1-201ENST00000634467 498 ntBASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 MIR4275-201ENST00000636486 87 ntBASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.02□□□□□ -1.77
MBD3L4A6NDZ8 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
MBD3L4A6NDZ8 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
MBD3L4A6NDZ8 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
MBD3L4A6NDZ8 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.01□□□□□ -1.77
MBD3L4A6NDZ8 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
MBD3L4A6NDZ8 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.01□□□□□ -1.77
MBD3L4A6NDZ8 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
MBD3L4A6NDZ8 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
MBD3L4A6NDZ8 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
MBD3L4A6NDZ8 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
MBD3L4A6NDZ8 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
MBD3L4A6NDZ8 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
MBD3L4A6NDZ8 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
MBD3L4A6NDZ8 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
MBD3L4A6NDZ8 RNU6-1120P-201ENST00000362988 108 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms