Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC1.81□□□□□ -2.12
TRAV13-1A0A0B4J241 AC093770.1-201ENST00000511559 571 ntBASIC1.81□□□□□ -2.12
TRAV13-1A0A0B4J241 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.81□□□□□ -2.12
TRAV13-1A0A0B4J241 RNA5SP341-201ENST00000516261 117 ntBASIC1.81□□□□□ -2.12
TRAV13-1A0A0B4J241 CKS1BP7-201ENST00000522230 235 ntBASIC1.81□□□□□ -2.12
TRAV13-1A0A0B4J241 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.81□□□□□ -2.12
TRAV13-1A0A0B4J241 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC1.81□□□□□ -2.12
TRAV13-1A0A0B4J241 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC1.81□□□□□ -2.12
TRAV13-1A0A0B4J241 CCNG2P1-201ENST00000549521 1000 ntBASIC1.81□□□□□ -2.12
TRAV13-1A0A0B4J241 AC017100.2-201ENST00000584628 355 ntBASIC1.81□□□□□ -2.12
TRAV13-1A0A0B4J241 AL160237.3-201ENST00000604114 1013 ntBASIC1.81□□□□□ -2.12
TRAV13-1A0A0B4J241 AL161629.2-201ENST00000615347 275 ntBASIC1.81□□□□□ -2.12
TRAV13-1A0A0B4J241 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC1.81□□□□□ -2.12
TRAV13-1A0A0B4J241 AC079597.1-201ENST00000624306 508 ntBASIC1.81□□□□□ -2.12
TRAV13-1A0A0B4J241 U6.107-201ENST00000637108 79 ntBASIC1.81□□□□□ -2.12
TRAV13-1A0A0B4J241 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC1.81□□□□□ -2.12
TRAV13-1A0A0B4J241 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.8□□□□□ -2.12
TRAV13-1A0A0B4J241 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.8□□□□□ -2.12
TRAV13-1A0A0B4J241 AL596028.1-201ENST00000326971 197 ntBASIC1.8□□□□□ -2.12
TRAV13-1A0A0B4J241 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
TRAV13-1A0A0B4J241 MIR670-201ENST00000390142 98 ntBASIC1.8□□□□□ -2.12
TRAV13-1A0A0B4J241 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
TRAV13-1A0A0B4J241 RNU6ATAC34P-201ENST00000408879 121 ntBASIC1.8□□□□□ -2.12
TRAV13-1A0A0B4J241 AF274854.1-201ENST00000413236 615 ntBASIC1.8□□□□□ -2.12
TRAV13-1A0A0B4J241 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC1.8□□□□□ -2.12
TRAV13-1A0A0B4J241 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.8□□□□□ -2.12
TRAV13-1A0A0B4J241 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC1.8□□□□□ -2.12
TRAV13-1A0A0B4J241 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC1.8□□□□□ -2.12
TRAV13-1A0A0B4J241 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC1.8□□□□□ -2.12
TRAV13-1A0A0B4J241 AL365496.1-201ENST00000426885 215 ntBASIC1.8□□□□□ -2.12
TRAV13-1A0A0B4J241 EZH2P1-201ENST00000431167 291 ntBASIC1.8□□□□□ -2.12
TRAV13-1A0A0B4J241 NDUFB4P6-201ENST00000436819 366 ntBASIC1.8□□□□□ -2.12
TRAV13-1A0A0B4J241 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC1.8□□□□□ -2.12
TRAV13-1A0A0B4J241 AL121871.1-201ENST00000443413 436 ntBASIC1.8□□□□□ -2.12
TRAV13-1A0A0B4J241 IFNA11P-201ENST00000446352 526 ntBASIC1.8□□□□□ -2.12
TRAV13-1A0A0B4J241 AC233279.1-201ENST00000455300 423 ntBASIC1.8□□□□□ -2.12
TRAV13-1A0A0B4J241 snoU13.22-201ENST00000459428 104 ntBASIC1.8□□□□□ -2.12
TRAV13-1A0A0B4J241 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC1.8□□□□□ -2.12
TRAV13-1A0A0B4J241 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
TRAV13-1A0A0B4J241 AC010374.2-201ENST00000512933 535 ntBASIC1.8□□□□□ -2.12
TRAV13-1A0A0B4J241 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC1.8□□□□□ -2.12
TRAV13-1A0A0B4J241 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.8□□□□□ -2.12
TRAV13-1A0A0B4J241 AC022080.3-201ENST00000544433 482 ntBASIC1.8□□□□□ -2.12
TRAV13-1A0A0B4J241 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.8□□□□□ -2.12
TRAV13-1A0A0B4J241 AC123904.3-201ENST00000547218 814 ntBASIC1.8□□□□□ -2.12
TRAV13-1A0A0B4J241 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.8□□□□□ -2.12
TRAV13-1A0A0B4J241 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.8□□□□□ -2.12
TRAV13-1A0A0B4J241 AC007954.1-201ENST00000554198 494 ntBASIC1.8□□□□□ -2.12
TRAV13-1A0A0B4J241 CFL2-206ENST00000556161 546 ntTSL 4 BASIC1.8□□□□□ -2.12
TRAV13-1A0A0B4J241 TRAV28-201ENST00000557548 323 ntBASIC1.8□□□□□ -2.12
TRAV13-1A0A0B4J241 AMZ2P1-203ENST00000565833 850 ntBASIC1.8□□□□□ -2.12
TRAV13-1A0A0B4J241 ISCA1P3-201ENST00000577104 373 ntBASIC1.8□□□□□ -2.12
TRAV13-1A0A0B4J241 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.8□□□□□ -2.12
TRAV13-1A0A0B4J241 AC245884.12-201ENST00000615364 59 ntBASIC1.8□□□□□ -2.12
TRAV13-1A0A0B4J241 HMGB1P24-202ENST00000615653 685 ntBASIC1.8□□□□□ -2.12
TRAV13-1A0A0B4J241 AC018926.3-201ENST00000618841 406 ntBASIC1.8□□□□□ -2.12
TRAV13-1A0A0B4J241 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC1.8□□□□□ -2.12
TRAV13-1A0A0B4J241 AL353748.2-201ENST00000622148 471 ntBASIC1.8□□□□□ -2.12
TRAV13-1A0A0B4J241 CU459211.1-201ENST00000635667 749 ntBASIC1.8□□□□□ -2.12
TRAV13-1A0A0B4J241 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
TRAV13-1A0A0B4J241 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC1.8□□□□□ -2.12
TRAV13-1A0A0B4J241 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.8□□□□□ -2.12
TRAV13-1A0A0B4J241 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
TRAV13-1A0A0B4J241 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
TRAV13-1A0A0B4J241 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.79□□□□□ -2.12
TRAV13-1A0A0B4J241 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
TRAV13-1A0A0B4J241 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
TRAV13-1A0A0B4J241 RNU1-100P-201ENST00000365255 165 ntBASIC1.79□□□□□ -2.12
TRAV13-1A0A0B4J241 CRP-202ENST00000368110 667 ntTSL 3 BASIC1.79□□□□□ -2.12
TRAV13-1A0A0B4J241 SNORA18.3-201ENST00000384122 132 ntBASIC1.79□□□□□ -2.12
TRAV13-1A0A0B4J241 RNU6-198P-201ENST00000384258 104 ntBASIC1.79□□□□□ -2.12
TRAV13-1A0A0B4J241 SNORA51.12-201ENST00000384448 134 ntBASIC1.79□□□□□ -2.12
TRAV13-1A0A0B4J241 MIR34B-201ENST00000385076 84 ntBASIC1.79□□□□□ -2.12
TRAV13-1A0A0B4J241 MIR524-201ENST00000385242 87 ntBASIC1.79□□□□□ -2.12
TRAV13-1A0A0B4J241 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
TRAV13-1A0A0B4J241 SNORA48.5-201ENST00000391143 135 ntBASIC1.79□□□□□ -2.12
TRAV13-1A0A0B4J241 U3.29-201ENST00000391296 212 ntBASIC1.79□□□□□ -2.12
TRAV13-1A0A0B4J241 CYCSP45-201ENST00000402289 315 ntBASIC1.79□□□□□ -2.12
TRAV13-1A0A0B4J241 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC1.79□□□□□ -2.12
TRAV13-1A0A0B4J241 AL513331.1-201ENST00000411908 397 ntBASIC1.79□□□□□ -2.12
TRAV13-1A0A0B4J241 AL592148.1-201ENST00000413568 445 ntBASIC1.79□□□□□ -2.12
TRAV13-1A0A0B4J241 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC1.79□□□□□ -2.12
TRAV13-1A0A0B4J241 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.79□□□□□ -2.12
TRAV13-1A0A0B4J241 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC1.79□□□□□ -2.12
TRAV13-1A0A0B4J241 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC1.79□□□□□ -2.12
TRAV13-1A0A0B4J241 AC087499.2-201ENST00000432861 149 ntBASIC1.79□□□□□ -2.12
TRAV13-1A0A0B4J241 UBE2V1P13-201ENST00000436983 439 ntBASIC1.79□□□□□ -2.12
TRAV13-1A0A0B4J241 PGBD4P3-201ENST00000440731 581 ntBASIC1.79□□□□□ -2.12
TRAV13-1A0A0B4J241 AC104389.3-201ENST00000445629 235 ntBASIC1.79□□□□□ -2.12
TRAV13-1A0A0B4J241 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.79□□□□□ -2.12
TRAV13-1A0A0B4J241 AP001992.1-205ENST00000462248 379 ntBASIC1.79□□□□□ -2.12
TRAV13-1A0A0B4J241 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC1.79□□□□□ -2.12
TRAV13-1A0A0B4J241 FTH1P2-201ENST00000466086 412 ntBASIC1.79□□□□□ -2.12
TRAV13-1A0A0B4J241 RPL7P49-201ENST00000471402 708 ntBASIC1.79□□□□□ -2.12
TRAV13-1A0A0B4J241 RPS29P26-201ENST00000477483 171 ntBASIC1.79□□□□□ -2.12
TRAV13-1A0A0B4J241 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.79□□□□□ -2.12
TRAV13-1A0A0B4J241 CASP1-212ENST00000531166 300 ntTSL 5 BASIC1.79□□□□□ -2.12
TRAV13-1A0A0B4J241 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.79□□□□□ -2.12
TRAV13-1A0A0B4J241 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC1.79□□□□□ -2.12
TRAV13-1A0A0B4J241 MIR5092-201ENST00000583139 88 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms