Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC1.87□□□□□ -2.11
TRAV30A0A087WSZ9 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
TRAV30A0A087WSZ9 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC1.87□□□□□ -2.11
TRAV30A0A087WSZ9 AC078857.1-201ENST00000469870 667 ntBASIC1.87□□□□□ -2.11
TRAV30A0A087WSZ9 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
TRAV30A0A087WSZ9 GTF2IP9-201ENST00000502460 301 ntBASIC1.87□□□□□ -2.11
TRAV30A0A087WSZ9 KLRA1P-201ENST00000503499 986 ntBASIC1.87□□□□□ -2.11
TRAV30A0A087WSZ9 XKRY-201ENST00000510392 1100 ntBASIC1.87□□□□□ -2.11
TRAV30A0A087WSZ9 OR5BM1P-201ENST00000512021 366 ntBASIC1.87□□□□□ -2.11
TRAV30A0A087WSZ9 LEF1-218ENST00000512172 598 ntTSL 2 BASIC1.87□□□□□ -2.11
TRAV30A0A087WSZ9 AC016550.3-201ENST00000515706 767 ntBASIC1.87□□□□□ -2.11
TRAV30A0A087WSZ9 RN7SKP132-201ENST00000516001 208 ntBASIC1.87□□□□□ -2.11
TRAV30A0A087WSZ9 HMGB1P46-201ENST00000520062 610 ntBASIC1.87□□□□□ -2.11
TRAV30A0A087WSZ9 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC1.87□□□□□ -2.11
TRAV30A0A087WSZ9 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.87□□□□□ -2.11
TRAV30A0A087WSZ9 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.87□□□□□ -2.11
TRAV30A0A087WSZ9 AC126177.3-201ENST00000551839 688 ntBASIC1.87□□□□□ -2.11
TRAV30A0A087WSZ9 SERPINE4P-201ENST00000554978 281 ntBASIC1.87□□□□□ -2.11
TRAV30A0A087WSZ9 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC1.87□□□□□ -2.11
TRAV30A0A087WSZ9 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC1.87□□□□□ -2.11
TRAV30A0A087WSZ9 LARP7P3-201ENST00000579888 337 ntBASIC1.87□□□□□ -2.11
TRAV30A0A087WSZ9 NRBF2P5-201ENST00000603087 788 ntBASIC1.87□□□□□ -2.11
TRAV30A0A087WSZ9 APOOP1-201ENST00000604695 592 ntBASIC1.87□□□□□ -2.11
TRAV30A0A087WSZ9 AC009902.3-201ENST00000606235 2172 ntBASIC1.87□□□□□ -2.11
TRAV30A0A087WSZ9 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC1.87□□□□□ -2.11
TRAV30A0A087WSZ9 VN1R74P-201ENST00000613259 503 ntBASIC1.87□□□□□ -2.11
TRAV30A0A087WSZ9 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC1.87□□□□□ -2.11
TRAV30A0A087WSZ9 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC1.87□□□□□ -2.11
TRAV30A0A087WSZ9 MIR1291-201ENST00000627649 87 ntBASIC1.87□□□□□ -2.11
TRAV30A0A087WSZ9 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC1.86□□□□□ -2.11
TRAV30A0A087WSZ9 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.86□□□□□ -2.11
TRAV30A0A087WSZ9 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC1.86□□□□□ -2.11
TRAV30A0A087WSZ9 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
TRAV30A0A087WSZ9 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
TRAV30A0A087WSZ9 SNORA1.3-201ENST00000384676 136 ntBASIC1.86□□□□□ -2.11
TRAV30A0A087WSZ9 RNU2-40P-201ENST00000410833 196 ntBASIC1.86□□□□□ -2.11
TRAV30A0A087WSZ9 AC096664.2-201ENST00000411843 406 ntBASIC1.86□□□□□ -2.11
TRAV30A0A087WSZ9 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC1.86□□□□□ -2.11
TRAV30A0A087WSZ9 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.86□□□□□ -2.11
TRAV30A0A087WSZ9 RPL7P44-201ENST00000424827 742 ntBASIC1.86□□□□□ -2.11
TRAV30A0A087WSZ9 MTATP6P11-201ENST00000428071 670 ntBASIC1.86□□□□□ -2.11
TRAV30A0A087WSZ9 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC1.86□□□□□ -2.11
TRAV30A0A087WSZ9 AC093663.2-201ENST00000484625 313 ntBASIC1.86□□□□□ -2.11
TRAV30A0A087WSZ9 RPL36AP51-201ENST00000487216 318 ntBASIC1.86□□□□□ -2.11
TRAV30A0A087WSZ9 RNA5SP320-201ENST00000516263 124 ntBASIC1.86□□□□□ -2.11
TRAV30A0A087WSZ9 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC1.86□□□□□ -2.11
TRAV30A0A087WSZ9 OR5AK3P-201ENST00000527486 1297 ntBASIC1.86□□□□□ -2.11
TRAV30A0A087WSZ9 OR4R2P-201ENST00000530815 597 ntBASIC1.86□□□□□ -2.11
TRAV30A0A087WSZ9 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.86□□□□□ -2.11
TRAV30A0A087WSZ9 AL138976.2-201ENST00000563989 694 ntBASIC1.86□□□□□ -2.11
TRAV30A0A087WSZ9 AC105036.1-201ENST00000566222 271 ntBASIC1.86□□□□□ -2.11
TRAV30A0A087WSZ9 MIR4448-201ENST00000584360 86 ntBASIC1.86□□□□□ -2.11
TRAV30A0A087WSZ9 VN1R90P-201ENST00000595717 726 ntBASIC1.86□□□□□ -2.11
TRAV30A0A087WSZ9 AC098657.3-201ENST00000620434 263 ntBASIC1.86□□□□□ -2.11
TRAV30A0A087WSZ9 AC095031.1-201ENST00000623685 672 ntBASIC1.86□□□□□ -2.11
TRAV30A0A087WSZ9 AC012640.5-201ENST00000623897 319 ntBASIC1.86□□□□□ -2.11
TRAV30A0A087WSZ9 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC1.86□□□□□ -2.11
TRAV30A0A087WSZ9 ZNF833P-201ENST00000424938 1494 ntBASIC1.86□□□□□ -2.11
TRAV30A0A087WSZ9 MTND4P1-201ENST00000457501 1466 ntBASIC1.86□□□□□ -2.11
TRAV30A0A087WSZ9 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
TRAV30A0A087WSZ9 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.85□□□□□ -2.11
TRAV30A0A087WSZ9 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.85□□□□□ -2.11
TRAV30A0A087WSZ9 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
TRAV30A0A087WSZ9 MIR208A-201ENST00000362287 71 ntBASIC1.85□□□□□ -2.11
TRAV30A0A087WSZ9 AP002784.2-201ENST00000397300 549 ntBASIC1.85□□□□□ -2.11
TRAV30A0A087WSZ9 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
TRAV30A0A087WSZ9 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC1.85□□□□□ -2.11
TRAV30A0A087WSZ9 AC006946.1-201ENST00000429106 328 ntBASIC1.85□□□□□ -2.11
TRAV30A0A087WSZ9 OR4K11P-201ENST00000431829 904 ntBASIC1.85□□□□□ -2.11
TRAV30A0A087WSZ9 ATP5F1P1-201ENST00000433775 569 ntBASIC1.85□□□□□ -2.11
TRAV30A0A087WSZ9 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
TRAV30A0A087WSZ9 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC1.85□□□□□ -2.11
TRAV30A0A087WSZ9 AC233279.1-201ENST00000455300 423 ntBASIC1.85□□□□□ -2.11
TRAV30A0A087WSZ9 RN7SL432P-201ENST00000484057 298 ntBASIC1.85□□□□□ -2.11
TRAV30A0A087WSZ9 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC1.85□□□□□ -2.11
TRAV30A0A087WSZ9 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC1.85□□□□□ -2.11
TRAV30A0A087WSZ9 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.85□□□□□ -2.11
TRAV30A0A087WSZ9 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
TRAV30A0A087WSZ9 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC1.85□□□□□ -2.11
TRAV30A0A087WSZ9 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.85□□□□□ -2.11
TRAV30A0A087WSZ9 VN1R92P-201ENST00000598511 928 ntBASIC1.85□□□□□ -2.11
TRAV30A0A087WSZ9 AC006023.1-201ENST00000603944 259 ntBASIC1.85□□□□□ -2.11
TRAV30A0A087WSZ9 AC007621.1-201ENST00000604544 437 ntBASIC1.85□□□□□ -2.11
TRAV30A0A087WSZ9 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.85□□□□□ -2.11
TRAV30A0A087WSZ9 RMST_5.1-201ENST00000618704 126 ntBASIC1.85□□□□□ -2.11
TRAV30A0A087WSZ9 AC068880.5-201ENST00000624331 290 ntBASIC1.85□□□□□ -2.11
TRAV30A0A087WSZ9 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
TRAV30A0A087WSZ9 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC1.85□□□□□ -2.11
TRAV30A0A087WSZ9 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
TRAV30A0A087WSZ9 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
TRAV30A0A087WSZ9 KPNA2P1-201ENST00000458289 1591 ntBASIC1.85□□□□□ -2.11
TRAV30A0A087WSZ9 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.85□□□□□ -2.11
TRAV30A0A087WSZ9 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
TRAV30A0A087WSZ9 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
TRAV30A0A087WSZ9 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
TRAV30A0A087WSZ9 MIR21-201ENST00000362134 72 ntBASIC1.84□□□□□ -2.11
TRAV30A0A087WSZ9 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC1.84□□□□□ -2.11
TRAV30A0A087WSZ9 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.84□□□□□ -2.11
TRAV30A0A087WSZ9 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC1.84□□□□□ -2.11
TRAV30A0A087WSZ9 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms