Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
PCDHGA4Q9Y5G9 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC6.54□□□□□ -1.36
PCDHGA4Q9Y5G9 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PCDHGA4Q9Y5G9 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PCDHGA4Q9Y5G9 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PCDHGA4Q9Y5G9 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHGA4Q9Y5G9 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
PCDHGA4Q9Y5G9 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHGA4Q9Y5G9 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHGA4Q9Y5G9 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC6.53□□□□□ -1.36
PCDHGA4Q9Y5G9 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.53□□□□□ -1.36
PCDHGA4Q9Y5G9 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHGA4Q9Y5G9 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHGA4Q9Y5G9 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.53□□□□□ -1.36
PCDHGA4Q9Y5G9 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHGA4Q9Y5G9 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHGA4Q9Y5G9 Y_RNA.7-201ENST00000362352 102 ntBASIC6.53□□□□□ -1.36
PCDHGA4Q9Y5G9 Y_RNA.75-201ENST00000362927 97 ntBASIC6.53□□□□□ -1.36
PCDHGA4Q9Y5G9 RN7SKP227-201ENST00000364445 330 ntBASIC6.53□□□□□ -1.36
PCDHGA4Q9Y5G9 RN7SKP15-201ENST00000364742 309 ntBASIC6.53□□□□□ -1.36
PCDHGA4Q9Y5G9 RNA5SP85-201ENST00000365378 119 ntBASIC6.53□□□□□ -1.36
PCDHGA4Q9Y5G9 Y_RNA.412-201ENST00000384001 104 ntBASIC6.53□□□□□ -1.36
PCDHGA4Q9Y5G9 RNA5SP122-201ENST00000384457 108 ntBASIC6.53□□□□□ -1.36
PCDHGA4Q9Y5G9 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
PCDHGA4Q9Y5G9 SNORA40.19-201ENST00000390846 128 ntBASIC6.53□□□□□ -1.36
PCDHGA4Q9Y5G9 AC099677.3-201ENST00000427081 395 ntBASIC6.53□□□□□ -1.36
PCDHGA4Q9Y5G9 AP000936.3-201ENST00000438127 255 ntBASIC6.53□□□□□ -1.36
PCDHGA4Q9Y5G9 EIF5AP4-201ENST00000441206 465 ntBASIC6.53□□□□□ -1.36
PCDHGA4Q9Y5G9 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.53□□□□□ -1.36
PCDHGA4Q9Y5G9 HIGD1AP2-201ENST00000446367 280 ntBASIC6.53□□□□□ -1.36
PCDHGA4Q9Y5G9 snoU109.4-201ENST00000458953 143 ntBASIC6.53□□□□□ -1.36
PCDHGA4Q9Y5G9 TOMM22P6-201ENST00000465035 409 ntBASIC6.53□□□□□ -1.36
PCDHGA4Q9Y5G9 RPS15AP34-201ENST00000487776 387 ntBASIC6.53□□□□□ -1.36
PCDHGA4Q9Y5G9 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.53□□□□□ -1.36
PCDHGA4Q9Y5G9 RNA5SP318-201ENST00000516352 92 ntBASIC6.53□□□□□ -1.36
PCDHGA4Q9Y5G9 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC6.53□□□□□ -1.36
PCDHGA4Q9Y5G9 GSTP1P1-201ENST00000548078 319 ntBASIC6.53□□□□□ -1.36
PCDHGA4Q9Y5G9 CTSLP2-201ENST00000580501 394 ntBASIC6.53□□□□□ -1.36
PCDHGA4Q9Y5G9 AC012368.3-201ENST00000604190 219 ntBASIC6.53□□□□□ -1.36
PCDHGA4Q9Y5G9 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHGA4Q9Y5G9 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC6.53□□□□□ -1.36
PCDHGA4Q9Y5G9 SNORA16A-202ENST00000628458 135 ntBASIC6.53□□□□□ -1.36
PCDHGA4Q9Y5G9 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.53□□□□□ -1.36
PCDHGA4Q9Y5G9 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.53□□□□□ -1.36
PCDHGA4Q9Y5G9 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.53□□□□□ -1.36
PCDHGA4Q9Y5G9 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC6.53□□□□□ -1.36
PCDHGA4Q9Y5G9 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHGA4Q9Y5G9 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
PCDHGA4Q9Y5G9 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHGA4Q9Y5G9 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHGA4Q9Y5G9 CASC19-246ENST00000641625 1606 ntBASIC6.53□□□□□ -1.36
PCDHGA4Q9Y5G9 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
PCDHGA4Q9Y5G9 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHGA4Q9Y5G9 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.53□□□□□ -1.36
PCDHGA4Q9Y5G9 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
PCDHGA4Q9Y5G9 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.53□□□□□ -1.36
PCDHGA4Q9Y5G9 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.53□□□□□ -1.36
PCDHGA4Q9Y5G9 MFSD8-219ENST00000641228 2559 ntBASIC6.53□□□□□ -1.36
PCDHGA4Q9Y5G9 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHGA4Q9Y5G9 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
PCDHGA4Q9Y5G9 AC022905.1-201ENST00000503430 3048 ntBASIC6.52□□□□□ -1.36
PCDHGA4Q9Y5G9 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PCDHGA4Q9Y5G9 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
PCDHGA4Q9Y5G9 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC6.52□□□□□ -1.37
PCDHGA4Q9Y5G9 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PCDHGA4Q9Y5G9 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
PCDHGA4Q9Y5G9 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PCDHGA4Q9Y5G9 RNU6-37P-201ENST00000362692 107 ntBASIC6.52□□□□□ -1.37
PCDHGA4Q9Y5G9 RNU6-11P-201ENST00000364234 107 ntBASIC6.52□□□□□ -1.37
PCDHGA4Q9Y5G9 RNU6-7-201ENST00000364784 107 ntBASIC6.52□□□□□ -1.37
PCDHGA4Q9Y5G9 Y_RNA.309-201ENST00000365046 111 ntBASIC6.52□□□□□ -1.37
PCDHGA4Q9Y5G9 RNU6-8-201ENST00000365467 107 ntBASIC6.52□□□□□ -1.37
PCDHGA4Q9Y5G9 RNU6-25P-201ENST00000383873 107 ntBASIC6.52□□□□□ -1.37
PCDHGA4Q9Y5G9 RNU6-1-201ENST00000383898 107 ntBASIC6.52□□□□□ -1.37
PCDHGA4Q9Y5G9 RNU6-36P-201ENST00000384172 107 ntBASIC6.52□□□□□ -1.37
PCDHGA4Q9Y5G9 RNU6-4P-201ENST00000384205 107 ntBASIC6.52□□□□□ -1.37
PCDHGA4Q9Y5G9 RNU6-5P-201ENST00000384238 107 ntBASIC6.52□□□□□ -1.37
PCDHGA4Q9Y5G9 RNU6-3P-201ENST00000384314 107 ntBASIC6.52□□□□□ -1.37
PCDHGA4Q9Y5G9 RNU6-16P-201ENST00000384385 107 ntBASIC6.52□□□□□ -1.37
PCDHGA4Q9Y5G9 RNU6-15P-201ENST00000384534 107 ntBASIC6.52□□□□□ -1.37
PCDHGA4Q9Y5G9 Y_RNA.534-201ENST00000384599 112 ntBASIC6.52□□□□□ -1.37
PCDHGA4Q9Y5G9 RNU6-2-201ENST00000384627 107 ntBASIC6.52□□□□□ -1.37
PCDHGA4Q9Y5G9 RNU6-29P-201ENST00000384637 107 ntBASIC6.52□□□□□ -1.37
PCDHGA4Q9Y5G9 RNU6-9-201ENST00000384776 107 ntBASIC6.52□□□□□ -1.37
PCDHGA4Q9Y5G9 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC6.52□□□□□ -1.37
PCDHGA4Q9Y5G9 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.52□□□□□ -1.37
PCDHGA4Q9Y5G9 AL512844.2-201ENST00000433990 593 ntBASIC6.52□□□□□ -1.37
PCDHGA4Q9Y5G9 Z82188.1-201ENST00000436709 154 ntBASIC6.52□□□□□ -1.37
PCDHGA4Q9Y5G9 AL163193.1-201ENST00000444895 788 ntBASIC6.52□□□□□ -1.37
PCDHGA4Q9Y5G9 RPL23AP28-201ENST00000448062 470 ntBASIC6.52□□□□□ -1.37
PCDHGA4Q9Y5G9 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC6.52□□□□□ -1.37
PCDHGA4Q9Y5G9 RN7SL216P-201ENST00000471607 298 ntBASIC6.52□□□□□ -1.37
PCDHGA4Q9Y5G9 AC092865.4-201ENST00000477936 615 ntBASIC6.52□□□□□ -1.37
PCDHGA4Q9Y5G9 RN7SL382P-201ENST00000482631 282 ntBASIC6.52□□□□□ -1.37
PCDHGA4Q9Y5G9 HMGB3P3-201ENST00000510526 400 ntBASIC6.52□□□□□ -1.37
PCDHGA4Q9Y5G9 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.52□□□□□ -1.37
PCDHGA4Q9Y5G9 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC6.52□□□□□ -1.37
PCDHGA4Q9Y5G9 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.52□□□□□ -1.37
PCDHGA4Q9Y5G9 TOMM20P1-201ENST00000534518 427 ntBASIC6.52□□□□□ -1.37
PCDHGA4Q9Y5G9 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms