Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 AC007546.2-201ENST00000623996 360 ntBASIC3.55□□□□□ -1.84
LSM4Q9Y4Z0 MIR4275-201ENST00000636486 87 ntBASIC3.55□□□□□ -1.84
LSM4Q9Y4Z0 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.55□□□□□ -1.84
LSM4Q9Y4Z0 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.55□□□□□ -1.84
LSM4Q9Y4Z0 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.55□□□□□ -1.84
LSM4Q9Y4Z0 AC116096.1-201ENST00000566804 2314 ntBASIC3.55□□□□□ -1.84
LSM4Q9Y4Z0 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
LSM4Q9Y4Z0 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
LSM4Q9Y4Z0 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 AL133243.3-201ENST00000617415 3004 ntBASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 AC016588.2-201ENST00000632484 3021 ntBASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 OR14L1P-202ENST00000641545 3009 ntBASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 CPHL1P-201ENST00000461341 3407 ntBASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 RNU4-1-201ENST00000363925 141 ntBASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 RNA5SP479-201ENST00000364858 117 ntBASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 MIR708-201ENST00000390708 88 ntBASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 Y_RNA.582-201ENST00000391023 95 ntBASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 SDHCP2-201ENST00000398565 501 ntBASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 AL109755.1-201ENST00000401791 649 ntBASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 RPS3AP24-201ENST00000407896 734 ntBASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 RNA5SP104-201ENST00000410989 118 ntBASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 RPL21P66-201ENST00000426566 466 ntBASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 AC069285.2-201ENST00000440210 275 ntBASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 AC093156.1-201ENST00000440382 670 ntBASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 AL353748.1-201ENST00000440753 474 ntBASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 RPS11P1-201ENST00000451072 473 ntBASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 MTND1P12-201ENST00000455231 147 ntBASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 AC007537.2-201ENST00000472093 511 ntBASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 TMED11P-201ENST00000479478 690 ntBASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 RPS15AP36-201ENST00000492022 382 ntBASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 VN1R104P-201ENST00000505115 1009 ntBASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 FTH1P21-201ENST00000512179 511 ntBASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 MTCO2P4-201ENST00000517968 247 ntBASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 OR5D17P-201ENST00000531492 978 ntBASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 MIR3913-1-201ENST00000577744 102 ntBASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 AC069061.3-201ENST00000582254 823 ntBASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 AC146944.4-201ENST00000602697 718 ntBASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 AC012443.1-201ENST00000605605 231 ntBASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 MIR6716-201ENST00000613413 80 ntBASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 AC068724.3-201ENST00000625906 87 ntBASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 AC084035.1-201ENST00000634543 607 ntBASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 AC092447.7-201ENST00000422212 1621 ntBASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 AC024560.2-201ENST00000507981 1497 ntBASIC3.54□□□□□ -1.84
LSM4Q9Y4Z0 AC011266.1-201ENST00000624119 3569 ntBASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 RNU6-173P-201ENST00000364215 104 ntBASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 RNY4P16-201ENST00000364768 94 ntBASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 RNU6-76P-201ENST00000384060 104 ntBASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 RNU5A-6P-201ENST00000384136 116 ntBASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 AC097374.1-203ENST00000400783 485 ntBASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 MIR1193-201ENST00000408109 78 ntBASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 RPL17P36-201ENST00000420302 549 ntBASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 UQCRBP1-201ENST00000421129 336 ntBASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 AC019097.1-201ENST00000424783 735 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms