Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 RAC1P6-201ENST00000423911 575 ntBASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 COX6CP13-201ENST00000428703 226 ntBASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 EZH2P1-201ENST00000431167 291 ntBASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 RPL23AP43-201ENST00000446445 471 ntBASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 AC016696.1-201ENST00000446949 318 ntBASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 AC022431.1-201ENST00000450941 438 ntBASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 RPL12P25-201ENST00000455592 494 ntBASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 AC006511.1-201ENST00000470614 315 ntBASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 RPL21P93-201ENST00000480465 489 ntBASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 AC097473.1-201ENST00000508142 408 ntBASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 SNORA25.10-201ENST00000515926 124 ntBASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 MIR1269B-201ENST00000580405 75 ntBASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 AC005191.1-201ENST00000603950 358 ntBASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 SUMO2P15-201ENST00000604285 278 ntBASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 MIR6826-201ENST00000617808 98 ntBASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 AL357559.1-201ENST00000622228 274 ntBASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 AC025034.2-201ENST00000623264 286 ntBASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 U6.114-201ENST00000636407 96 ntBASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 AC083843.2-201ENST00000568248 6253 ntBASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
AP4E1Q9UPM8 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
AP4E1Q9UPM8 BDP1P-201ENST00000582658 1990 ntBASIC5.29□□□□□ -1.56
AP4E1Q9UPM8 AC104623.2-202ENST00000623477 4002 ntBASIC5.29□□□□□ -1.56
AP4E1Q9UPM8 AL031595.2-201ENST00000624215 19071 ntBASIC5.29□□□□□ -1.56
AP4E1Q9UPM8 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
AP4E1Q9UPM8 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.29□□□□□ -1.56
AP4E1Q9UPM8 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
AP4E1Q9UPM8 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.29□□□□□ -1.56
AP4E1Q9UPM8 AC073136.1-201ENST00000449426 2884 ntBASIC5.29□□□□□ -1.56
AP4E1Q9UPM8 Y_RNA.252-201ENST00000364556 101 ntBASIC5.29□□□□□ -1.56
AP4E1Q9UPM8 RNU6-61P-201ENST00000365528 109 ntBASIC5.29□□□□□ -1.56
AP4E1Q9UPM8 Y_RNA.364-201ENST00000365532 101 ntBASIC5.29□□□□□ -1.56
AP4E1Q9UPM8 SET-203ENST00000372688 801 ntTSL 2 BASIC5.29□□□□□ -1.56
AP4E1Q9UPM8 RNU6-26P-201ENST00000383985 107 ntBASIC5.29□□□□□ -1.56
AP4E1Q9UPM8 SNORD3H-201ENST00000384486 214 ntBASIC5.29□□□□□ -1.56
AP4E1Q9UPM8 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.29□□□□□ -1.56
AP4E1Q9UPM8 RN7SKP114-201ENST00000410327 279 ntBASIC5.29□□□□□ -1.56
AP4E1Q9UPM8 RN7SKP229-201ENST00000410465 302 ntBASIC5.29□□□□□ -1.56
AP4E1Q9UPM8 AL355433.1-201ENST00000422804 300 ntBASIC5.29□□□□□ -1.56
AP4E1Q9UPM8 AL139148.1-201ENST00000427122 680 ntBASIC5.29□□□□□ -1.56
AP4E1Q9UPM8 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.29□□□□□ -1.56
AP4E1Q9UPM8 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.29□□□□□ -1.56
AP4E1Q9UPM8 BX323845.1-201ENST00000432417 179 ntBASIC5.29□□□□□ -1.56
AP4E1Q9UPM8 RPL36AP6-201ENST00000435770 321 ntBASIC5.29□□□□□ -1.56
AP4E1Q9UPM8 CYCSP24-201ENST00000445119 316 ntBASIC5.29□□□□□ -1.56
AP4E1Q9UPM8 RNU7-59P-201ENST00000459101 61 ntBASIC5.29□□□□□ -1.56
AP4E1Q9UPM8 AC008638.1-201ENST00000506035 866 ntBASIC5.29□□□□□ -1.56
AP4E1Q9UPM8 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.29□□□□□ -1.56
AP4E1Q9UPM8 AP000676.2-201ENST00000529711 301 ntBASIC5.29□□□□□ -1.56
AP4E1Q9UPM8 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.29□□□□□ -1.56
AP4E1Q9UPM8 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC5.29□□□□□ -1.56
AP4E1Q9UPM8 AC009852.2-201ENST00000567898 485 ntBASIC5.29□□□□□ -1.56
AP4E1Q9UPM8 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC5.29□□□□□ -1.56
AP4E1Q9UPM8 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.29□□□□□ -1.56
AP4E1Q9UPM8 AC004817.4-201ENST00000602396 3625 ntBASIC5.29□□□□□ -1.56
AP4E1Q9UPM8 ZNF519P1-201ENST00000449011 1626 ntBASIC5.29□□□□□ -1.56
AP4E1Q9UPM8 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.29□□□□□ -1.56
AP4E1Q9UPM8 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.29□□□□□ -1.56
AP4E1Q9UPM8 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
AP4E1Q9UPM8 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.28□□□□□ -1.56
AP4E1Q9UPM8 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
AP4E1Q9UPM8 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
AP4E1Q9UPM8 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
AP4E1Q9UPM8 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.28□□□□□ -1.56
AP4E1Q9UPM8 RNA5SP391-201ENST00000363456 119 ntBASIC5.28□□□□□ -1.56
AP4E1Q9UPM8 Y_RNA.176-201ENST00000363815 109 ntBASIC5.28□□□□□ -1.56
AP4E1Q9UPM8 SNORD82-201ENST00000365530 70 ntBASIC5.28□□□□□ -1.56
AP4E1Q9UPM8 SNORD116-11-201ENST00000383882 92 ntBASIC5.28□□□□□ -1.56
AP4E1Q9UPM8 RNU6-890P-201ENST00000384121 107 ntBASIC5.28□□□□□ -1.56
AP4E1Q9UPM8 Y_RNA.463-201ENST00000384271 102 ntBASIC5.28□□□□□ -1.56
AP4E1Q9UPM8 SOD2P1-201ENST00000396543 562 ntBASIC5.28□□□□□ -1.56
AP4E1Q9UPM8 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC5.28□□□□□ -1.56
AP4E1Q9UPM8 AL358176.3-201ENST00000420757 454 ntBASIC5.28□□□□□ -1.56
AP4E1Q9UPM8 ACTR3BP6-201ENST00000422332 1241 ntBASIC5.28□□□□□ -1.56
AP4E1Q9UPM8 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.28□□□□□ -1.56
AP4E1Q9UPM8 HMGB1P12-201ENST00000438594 598 ntBASIC5.28□□□□□ -1.56
AP4E1Q9UPM8 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.28□□□□□ -1.56
AP4E1Q9UPM8 RPL7AP61-201ENST00000443410 636 ntBASIC5.28□□□□□ -1.56
AP4E1Q9UPM8 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
AP4E1Q9UPM8 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.28□□□□□ -1.56
AP4E1Q9UPM8 AC092647.2-201ENST00000452998 253 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms