Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 AL159987.2-201ENST00000432754 307 ntBASIC4.67□□□□□ -1.66
HDAC9Q9UKV0 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.67□□□□□ -1.66
HDAC9Q9UKV0 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.67□□□□□ -1.66
HDAC9Q9UKV0 FGF7P3-201ENST00000454645 303 ntBASIC4.67□□□□□ -1.66
HDAC9Q9UKV0 RPS20P32-201ENST00000456044 356 ntBASIC4.67□□□□□ -1.66
HDAC9Q9UKV0 RNU7-136P-201ENST00000458819 69 ntBASIC4.67□□□□□ -1.66
HDAC9Q9UKV0 AP001486.1-201ENST00000463339 476 ntBASIC4.67□□□□□ -1.66
HDAC9Q9UKV0 AL136126.1-201ENST00000473603 402 ntBASIC4.67□□□□□ -1.66
HDAC9Q9UKV0 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.67□□□□□ -1.66
HDAC9Q9UKV0 AC025445.1-201ENST00000502728 300 ntBASIC4.67□□□□□ -1.66
HDAC9Q9UKV0 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.67□□□□□ -1.66
HDAC9Q9UKV0 AC005921.1-201ENST00000510589 286 ntBASIC4.67□□□□□ -1.66
HDAC9Q9UKV0 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.67□□□□□ -1.66
HDAC9Q9UKV0 RNA5SP309-201ENST00000516670 106 ntBASIC4.67□□□□□ -1.66
HDAC9Q9UKV0 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
HDAC9Q9UKV0 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HDAC9Q9UKV0 AC092470.1-201ENST00000546187 132 ntBASIC4.67□□□□□ -1.66
HDAC9Q9UKV0 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.67□□□□□ -1.66
HDAC9Q9UKV0 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.67□□□□□ -1.66
HDAC9Q9UKV0 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.67□□□□□ -1.66
HDAC9Q9UKV0 IGHV3-29-201ENST00000604817 344 ntBASIC4.67□□□□□ -1.66
HDAC9Q9UKV0 AC012360.2-201ENST00000609349 391 ntBASIC4.67□□□□□ -1.66
HDAC9Q9UKV0 AC025594.3-201ENST00000613068 790 ntBASIC4.67□□□□□ -1.66
HDAC9Q9UKV0 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.67□□□□□ -1.66
HDAC9Q9UKV0 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.67□□□□□ -1.66
HDAC9Q9UKV0 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.67□□□□□ -1.66
HDAC9Q9UKV0 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.67□□□□□ -1.66
HDAC9Q9UKV0 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HDAC9Q9UKV0 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.67□□□□□ -1.66
HDAC9Q9UKV0 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HDAC9Q9UKV0 MARK2P15-201ENST00000432204 2186 ntBASIC4.67□□□□□ -1.66
HDAC9Q9UKV0 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HDAC9Q9UKV0 ZNF734P-201ENST00000419494 1534 ntBASIC4.67□□□□□ -1.66
HDAC9Q9UKV0 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.66□□□□□ -1.66
HDAC9Q9UKV0 MTND4P16-201ENST00000466108 1367 ntBASIC4.66□□□□□ -1.66
HDAC9Q9UKV0 AL031985.3-201ENST00000565390 2449 ntBASIC4.66□□□□□ -1.66
HDAC9Q9UKV0 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HDAC9Q9UKV0 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HDAC9Q9UKV0 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
HDAC9Q9UKV0 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.66□□□□□ -1.66
HDAC9Q9UKV0 AL157700.1-201ENST00000561973 1432 ntBASIC4.66□□□□□ -1.66
HDAC9Q9UKV0 PABPC1P9-201ENST00000426076 1612 ntBASIC4.66□□□□□ -1.66
HDAC9Q9UKV0 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HDAC9Q9UKV0 DHFRP6-201ENST00000401776 268 ntBASIC4.66□□□□□ -1.66
HDAC9Q9UKV0 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.66□□□□□ -1.66
HDAC9Q9UKV0 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC4.66□□□□□ -1.66
HDAC9Q9UKV0 AC245052.5-201ENST00000416320 649 ntBASIC4.66□□□□□ -1.66
HDAC9Q9UKV0 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.66□□□□□ -1.66
HDAC9Q9UKV0 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.66□□□□□ -1.66
HDAC9Q9UKV0 AL365184.2-201ENST00000431139 435 ntBASIC4.66□□□□□ -1.66
HDAC9Q9UKV0 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC4.66□□□□□ -1.66
HDAC9Q9UKV0 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.66□□□□□ -1.66
HDAC9Q9UKV0 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.66□□□□□ -1.66
HDAC9Q9UKV0 RANP8-201ENST00000444720 713 ntBASIC4.66□□□□□ -1.66
HDAC9Q9UKV0 AC106707.2-201ENST00000484182 374 ntBASIC4.66□□□□□ -1.66
HDAC9Q9UKV0 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.66□□□□□ -1.66
HDAC9Q9UKV0 AC108941.1-201ENST00000502853 530 ntBASIC4.66□□□□□ -1.66
HDAC9Q9UKV0 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC4.66□□□□□ -1.66
HDAC9Q9UKV0 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.66□□□□□ -1.66
HDAC9Q9UKV0 VWA8P1-201ENST00000510889 176 ntBASIC4.66□□□□□ -1.66
HDAC9Q9UKV0 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.66□□□□□ -1.66
HDAC9Q9UKV0 RN7SKP18-201ENST00000516005 275 ntBASIC4.66□□□□□ -1.66
HDAC9Q9UKV0 OR5M7P-201ENST00000526140 972 ntBASIC4.66□□□□□ -1.66
HDAC9Q9UKV0 AP004242.1-201ENST00000533701 349 ntBASIC4.66□□□□□ -1.66
HDAC9Q9UKV0 AC069240.1-201ENST00000548774 375 ntBASIC4.66□□□□□ -1.66
HDAC9Q9UKV0 PCMTD1P2-201ENST00000565017 355 ntBASIC4.66□□□□□ -1.66
HDAC9Q9UKV0 AC012213.3-201ENST00000577199 777 ntBASIC4.66□□□□□ -1.66
HDAC9Q9UKV0 MIR3922-201ENST00000585192 84 ntBASIC4.66□□□□□ -1.66
HDAC9Q9UKV0 VN1R79P-201ENST00000593540 513 ntBASIC4.66□□□□□ -1.66
HDAC9Q9UKV0 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HDAC9Q9UKV0 AC103591.3-201ENST00000608684 209 ntBASIC4.66□□□□□ -1.66
HDAC9Q9UKV0 MIR6852-201ENST00000621699 66 ntBASIC4.66□□□□□ -1.66
HDAC9Q9UKV0 AC092656.1-203ENST00000624134 423 ntBASIC4.66□□□□□ -1.66
HDAC9Q9UKV0 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.66□□□□□ -1.66
HDAC9Q9UKV0 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.66□□□□□ -1.66
HDAC9Q9UKV0 MTCO1P23-201ENST00000415223 1526 ntBASIC4.66□□□□□ -1.66
HDAC9Q9UKV0 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.66□□□□□ -1.66
HDAC9Q9UKV0 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.66□□□□□ -1.66
HDAC9Q9UKV0 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
HDAC9Q9UKV0 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
HDAC9Q9UKV0 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.65□□□□□ -1.66
HDAC9Q9UKV0 PRO1804-201ENST00000623780 2050 ntBASIC4.65□□□□□ -1.66
HDAC9Q9UKV0 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.65□□□□□ -1.66
HDAC9Q9UKV0 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
HDAC9Q9UKV0 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HDAC9Q9UKV0 AC007685.1-201ENST00000329806 452 ntBASIC4.65□□□□□ -1.67
HDAC9Q9UKV0 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HDAC9Q9UKV0 SNORA31-201ENST00000362607 130 ntBASIC4.65□□□□□ -1.67
HDAC9Q9UKV0 RNU6-501P-201ENST00000364072 100 ntBASIC4.65□□□□□ -1.67
HDAC9Q9UKV0 RNU6-777P-201ENST00000364265 104 ntBASIC4.65□□□□□ -1.67
HDAC9Q9UKV0 RNU4-75P-201ENST00000364621 146 ntBASIC4.65□□□□□ -1.67
HDAC9Q9UKV0 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.65□□□□□ -1.67
HDAC9Q9UKV0 AL024474.1-201ENST00000404655 591 ntBASIC4.65□□□□□ -1.67
HDAC9Q9UKV0 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.65□□□□□ -1.67
HDAC9Q9UKV0 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.65□□□□□ -1.67
HDAC9Q9UKV0 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.65□□□□□ -1.67
HDAC9Q9UKV0 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.65□□□□□ -1.67
HDAC9Q9UKV0 AC083863.1-201ENST00000438811 231 ntBASIC4.65□□□□□ -1.67
HDAC9Q9UKV0 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.65□□□□□ -1.67
HDAC9Q9UKV0 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms