Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 AC008065.1-201ENST00000428525 348 ntBASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 BRK1P2-201ENST00000442875 223 ntBASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 AC010655.1-201ENST00000449336 292 ntBASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 EIF4A1P11-201ENST00000451239 222 ntBASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 RNU7-152P-201ENST00000458982 64 ntBASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 SNORD97-201ENST00000459187 142 ntBASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 RN7SL189P-201ENST00000468631 289 ntBASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 ST13P14-201ENST00000474095 734 ntBASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 CCDC34P1-201ENST00000507441 517 ntBASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 Y_RNA.718-201ENST00000517110 102 ntBASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 MTND4P7-201ENST00000523876 130 ntBASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 DEFB108D-201ENST00000527787 222 ntBASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 DEFB109D-201ENST00000529497 240 ntBASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 AL137161.1-201ENST00000532231 390 ntBASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 TOMM20P2-201ENST00000540082 421 ntBASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 ELOCP31-201ENST00000540463 467 ntBASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 MIR3171-201ENST00000584270 74 ntBASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 LLPHP1-201ENST00000603571 367 ntBASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 SNRPGP17-201ENST00000603780 214 ntBASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 AL592436.1-201ENST00000605135 558 ntBASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 CTHRC1P1-201ENST00000605383 469 ntBASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 AC116312.1-201ENST00000606841 314 ntBASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 AC092807.2-201ENST00000609367 243 ntBASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 AL161616.1-201ENST00000611867 286 ntBASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 AC103710.2-202ENST00000641454 2853 ntBASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 MTND4P14-201ENST00000435799 1354 ntBASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 AC027287.1-201ENST00000553115 1453 ntBASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 FAM91A3P-201ENST00000456826 2544 ntBASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 SMG1P6-201ENST00000532337 2930 ntBASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 SNURFL-201ENST00000309296 343 ntBASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 RNU6-1284P-201ENST00000363701 100 ntBASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 RNU6-82P-201ENST00000363970 107 ntBASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 SNORA63C-201ENST00000364578 129 ntBASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 SNORA4.3-201ENST00000365564 137 ntBASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 Y_RNA.378-201ENST00000365652 113 ntBASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 RNU6-637P-201ENST00000384050 107 ntBASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 RNU6-1013P-201ENST00000384180 107 ntBASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 RNU6-432P-201ENST00000384196 109 ntBASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 RNU6-1297P-201ENST00000384415 104 ntBASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 RNU6-178P-201ENST00000384631 104 ntBASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 MIR606-201ENST00000384851 96 ntBASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 MIR559-201ENST00000385188 96 ntBASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 MIR23A-201ENST00000385245 73 ntBASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 SOD2P1-201ENST00000396543 562 ntBASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 DBIP1-201ENST00000401435 260 ntBASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 AL109755.1-201ENST00000401791 649 ntBASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 MIR548K-201ENST00000408406 116 ntBASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 RNU2-47P-201ENST00000410649 186 ntBASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 AC114491.1-201ENST00000416095 246 ntBASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 CYCSP10-201ENST00000417973 294 ntBASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 AC068533.1-201ENST00000418542 415 ntBASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 AC007161.1-204ENST00000423039 460 ntBASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 DNAJC19P7-201ENST00000428811 344 ntBASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 AC092162.1-201ENST00000432828 434 ntBASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 NDUFB4P8-201ENST00000435351 367 ntBASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 RPL23AP43-201ENST00000446445 471 ntBASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 IGHV5-78-201ENST00000450948 295 ntBASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 RPS27AP1-201ENST00000475545 471 ntBASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 AC012181.1-201ENST00000479895 423 ntBASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 Y_RNA.654-201ENST00000497848 106 ntBASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 IGBP1P4-201ENST00000503202 879 ntBASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 AC098591.2-201ENST00000510152 315 ntBASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 AC098976.1-201ENST00000513014 541 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms