Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 AL603839.4-201ENST00000624658 1005 ntBASIC4.56□□□□□ -1.68
CCNL1Q9UK58 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCNL1Q9UK58 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CCNL1Q9UK58 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CCNL1Q9UK58 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.56□□□□□ -1.68
CCNL1Q9UK58 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCNL1Q9UK58 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCNL1Q9UK58 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CCNL1Q9UK58 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
CCNL1Q9UK58 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCNL1Q9UK58 RNU6-462P-201ENST00000362659 105 ntBASIC4.55□□□□□ -1.68
CCNL1Q9UK58 RNU6-777P-201ENST00000364265 104 ntBASIC4.55□□□□□ -1.68
CCNL1Q9UK58 RNU6-1122P-201ENST00000384449 107 ntBASIC4.55□□□□□ -1.68
CCNL1Q9UK58 MTCYBP36-201ENST00000404146 440 ntBASIC4.55□□□□□ -1.68
CCNL1Q9UK58 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
CCNL1Q9UK58 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.55□□□□□ -1.68
CCNL1Q9UK58 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.55□□□□□ -1.68
CCNL1Q9UK58 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.55□□□□□ -1.68
CCNL1Q9UK58 AC093392.2-201ENST00000450682 337 ntBASIC4.55□□□□□ -1.68
CCNL1Q9UK58 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.55□□□□□ -1.68
CCNL1Q9UK58 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.55□□□□□ -1.68
CCNL1Q9UK58 S100A11P2-201ENST00000467589 312 ntBASIC4.55□□□□□ -1.68
CCNL1Q9UK58 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.55□□□□□ -1.68
CCNL1Q9UK58 Vault.1-201ENST00000516474 102 ntBASIC4.55□□□□□ -1.68
CCNL1Q9UK58 FTH1P11-201ENST00000517577 551 ntBASIC4.55□□□□□ -1.68
CCNL1Q9UK58 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.55□□□□□ -1.68
CCNL1Q9UK58 MTND4LP26-201ENST00000518144 282 ntBASIC4.55□□□□□ -1.68
CCNL1Q9UK58 IGKV2-26-201ENST00000518305 343 ntBASIC4.55□□□□□ -1.68
CCNL1Q9UK58 AP002748.2-201ENST00000528671 348 ntBASIC4.55□□□□□ -1.68
CCNL1Q9UK58 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CCNL1Q9UK58 SULT1C2P1-202ENST00000562418 459 ntBASIC4.55□□□□□ -1.68
CCNL1Q9UK58 AC009063.1-201ENST00000563342 702 ntBASIC4.55□□□□□ -1.68
CCNL1Q9UK58 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.55□□□□□ -1.68
CCNL1Q9UK58 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.55□□□□□ -1.68
CCNL1Q9UK58 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.55□□□□□ -1.68
CCNL1Q9UK58 AC128687.2-201ENST00000609657 566 ntBASIC4.55□□□□□ -1.68
CCNL1Q9UK58 AL162274.2-201ENST00000614406 332 ntBASIC4.55□□□□□ -1.68
CCNL1Q9UK58 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCNL1Q9UK58 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CCNL1Q9UK58 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CCNL1Q9UK58 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCNL1Q9UK58 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCNL1Q9UK58 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCNL1Q9UK58 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCNL1Q9UK58 AC025125.1-201ENST00000624743 1922 ntBASIC4.54□□□□□ -1.68
CCNL1Q9UK58 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCNL1Q9UK58 AC092447.7-201ENST00000422212 1621 ntBASIC4.54□□□□□ -1.68
CCNL1Q9UK58 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.54□□□□□ -1.68
CCNL1Q9UK58 AL365361.1-201ENST00000566942 3481 ntBASIC4.54□□□□□ -1.68
CCNL1Q9UK58 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CCNL1Q9UK58 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCNL1Q9UK58 Y_RNA.6-201ENST00000362350 114 ntBASIC4.54□□□□□ -1.68
CCNL1Q9UK58 RNU6-921P-201ENST00000384361 107 ntBASIC4.54□□□□□ -1.68
CCNL1Q9UK58 RNU6-248P-201ENST00000410720 107 ntBASIC4.54□□□□□ -1.68
CCNL1Q9UK58 AC073264.1-201ENST00000411508 416 ntBASIC4.54□□□□□ -1.68
CCNL1Q9UK58 HMGB3P20-201ENST00000417997 600 ntBASIC4.54□□□□□ -1.68
CCNL1Q9UK58 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.54□□□□□ -1.68
CCNL1Q9UK58 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC4.54□□□□□ -1.68
CCNL1Q9UK58 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.54□□□□□ -1.68
CCNL1Q9UK58 AC009965.2-201ENST00000425328 970 ntBASIC4.54□□□□□ -1.68
CCNL1Q9UK58 RPL12P18-201ENST00000437175 325 ntBASIC4.54□□□□□ -1.68
CCNL1Q9UK58 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.54□□□□□ -1.68
CCNL1Q9UK58 VN1R10P-201ENST00000447106 875 ntBASIC4.54□□□□□ -1.68
CCNL1Q9UK58 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.54□□□□□ -1.68
CCNL1Q9UK58 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.54□□□□□ -1.68
CCNL1Q9UK58 RNU6-488P-201ENST00000515918 99 ntBASIC4.54□□□□□ -1.68
CCNL1Q9UK58 ARL2BPP5-201ENST00000523141 481 ntBASIC4.54□□□□□ -1.68
CCNL1Q9UK58 OR5G4P-201ENST00000525251 760 ntBASIC4.54□□□□□ -1.68
CCNL1Q9UK58 OR4A45P-201ENST00000529954 901 ntBASIC4.54□□□□□ -1.68
CCNL1Q9UK58 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.54□□□□□ -1.68
CCNL1Q9UK58 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.54□□□□□ -1.68
CCNL1Q9UK58 AC245505.1-201ENST00000556398 224 ntBASIC4.54□□□□□ -1.68
CCNL1Q9UK58 AC141257.3-201ENST00000572906 215 ntBASIC4.54□□□□□ -1.68
CCNL1Q9UK58 LARP7P2-201ENST00000575306 125 ntBASIC4.54□□□□□ -1.68
CCNL1Q9UK58 MIR3936-201ENST00000584304 110 ntBASIC4.54□□□□□ -1.68
CCNL1Q9UK58 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.54□□□□□ -1.68
CCNL1Q9UK58 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.54□□□□□ -1.68
CCNL1Q9UK58 AL589743.7-201ENST00000612637 233 ntBASIC4.54□□□□□ -1.68
CCNL1Q9UK58 AC116165.2-201ENST00000616705 206 ntBASIC4.54□□□□□ -1.68
CCNL1Q9UK58 AC104010.1-201ENST00000616889 150 ntBASIC4.54□□□□□ -1.68
CCNL1Q9UK58 AL122125.1-201ENST00000616999 600 ntBASIC4.54□□□□□ -1.68
CCNL1Q9UK58 AL160394.1-201ENST00000624765 724 ntBASIC4.54□□□□□ -1.68
CCNL1Q9UK58 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCNL1Q9UK58 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.54□□□□□ -1.68
CCNL1Q9UK58 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCNL1Q9UK58 AC117529.2-201ENST00000512159 2068 ntBASIC4.53□□□□□ -1.68
CCNL1Q9UK58 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCNL1Q9UK58 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCNL1Q9UK58 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.53□□□□□ -1.68
CCNL1Q9UK58 AC012020.1-201ENST00000624541 1728 ntBASIC4.53□□□□□ -1.68
CCNL1Q9UK58 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCNL1Q9UK58 RNU6-1283P-201ENST00000365314 105 ntBASIC4.53□□□□□ -1.68
CCNL1Q9UK58 RNU6-444P-201ENST00000383988 108 ntBASIC4.53□□□□□ -1.68
CCNL1Q9UK58 FCF1P9-201ENST00000412546 282 ntBASIC4.53□□□□□ -1.68
CCNL1Q9UK58 RPL7P30-201ENST00000420888 709 ntBASIC4.53□□□□□ -1.68
CCNL1Q9UK58 COTL1P1-201ENST00000422309 375 ntBASIC4.53□□□□□ -1.68
CCNL1Q9UK58 USP9YP36-201ENST00000424581 829 ntBASIC4.53□□□□□ -1.68
CCNL1Q9UK58 Z75741.1-201ENST00000446793 314 ntBASIC4.53□□□□□ -1.68
CCNL1Q9UK58 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCNL1Q9UK58 MTCO1P27-201ENST00000448269 226 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 150.3 ms