Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 RPS3AP54-201ENST00000435535 734 ntBASIC3.49□□□□□ -1.85
CHCHD3Q9NX63 AC108734.1-201ENST00000439549 399 ntBASIC3.49□□□□□ -1.85
CHCHD3Q9NX63 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.49□□□□□ -1.85
CHCHD3Q9NX63 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.49□□□□□ -1.85
CHCHD3Q9NX63 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.49□□□□□ -1.85
CHCHD3Q9NX63 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.49□□□□□ -1.85
CHCHD3Q9NX63 RPL23AP24-201ENST00000458203 385 ntBASIC3.49□□□□□ -1.85
CHCHD3Q9NX63 AC116533.1-201ENST00000459748 321 ntBASIC3.49□□□□□ -1.85
CHCHD3Q9NX63 AC017015.1-201ENST00000477387 286 ntBASIC3.49□□□□□ -1.85
CHCHD3Q9NX63 AC093809.1-201ENST00000509155 340 ntBASIC3.49□□□□□ -1.85
CHCHD3Q9NX63 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.49□□□□□ -1.85
CHCHD3Q9NX63 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.49□□□□□ -1.85
CHCHD3Q9NX63 AC110760.3-202ENST00000515177 371 ntBASIC3.49□□□□□ -1.85
CHCHD3Q9NX63 RN7SKP265-201ENST00000516448 223 ntBASIC3.49□□□□□ -1.85
CHCHD3Q9NX63 RNU6-56P-201ENST00000516986 93 ntBASIC3.49□□□□□ -1.85
CHCHD3Q9NX63 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.49□□□□□ -1.85
CHCHD3Q9NX63 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.49□□□□□ -1.85
CHCHD3Q9NX63 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.49□□□□□ -1.85
CHCHD3Q9NX63 AC004024.1-201ENST00000549244 247 ntBASIC3.49□□□□□ -1.85
CHCHD3Q9NX63 AC084824.1-201ENST00000550917 1005 ntBASIC3.49□□□□□ -1.85
CHCHD3Q9NX63 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.49□□□□□ -1.85
CHCHD3Q9NX63 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.49□□□□□ -1.85
CHCHD3Q9NX63 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.49□□□□□ -1.85
CHCHD3Q9NX63 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.49□□□□□ -1.85
CHCHD3Q9NX63 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.49□□□□□ -1.85
CHCHD3Q9NX63 AC022022.2-201ENST00000602989 360 ntBASIC3.49□□□□□ -1.85
CHCHD3Q9NX63 TUSC7.1-201ENST00000610969 165 ntBASIC3.49□□□□□ -1.85
CHCHD3Q9NX63 AL590099.1-201ENST00000615276 138 ntBASIC3.49□□□□□ -1.85
CHCHD3Q9NX63 AC068831.7-201ENST00000616954 363 ntBASIC3.49□□□□□ -1.85
CHCHD3Q9NX63 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.49□□□□□ -1.85
CHCHD3Q9NX63 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.49□□□□□ -1.85
CHCHD3Q9NX63 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.49□□□□□ -1.85
CHCHD3Q9NX63 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
CHCHD3Q9NX63 ZNF807-201ENST00000328088 1707 ntBASIC3.49□□□□□ -1.85
CHCHD3Q9NX63 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CHCHD3Q9NX63 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.49□□□□□ -1.85
CHCHD3Q9NX63 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
CHCHD3Q9NX63 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
CHCHD3Q9NX63 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 AC087359.1-201ENST00000508335 1740 ntBASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 RNA5SP383-201ENST00000362934 120 ntBASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 RNU6-97P-201ENST00000363387 104 ntBASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 RNA5SP505-201ENST00000364748 108 ntBASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 AL049693.1-201ENST00000402760 611 ntBASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 AL136116.1-201ENST00000403591 381 ntBASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 RN7SKP266-201ENST00000410232 287 ntBASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 RNU6-757P-201ENST00000410334 100 ntBASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 RNU6-1077P-201ENST00000410506 102 ntBASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 RNA5SP344-201ENST00000411081 104 ntBASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 RNA5SP31-201ENST00000411144 127 ntBASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 RAB28P1-201ENST00000411517 641 ntBASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 HIGD1AP15-201ENST00000416198 280 ntBASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 BX890604.2-201ENST00000427883 474 ntBASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 AL035407.1-201ENST00000429211 571 ntBASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 FGF7P5-201ENST00000441829 291 ntBASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 RAC1P7-201ENST00000445367 377 ntBASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 RPS4XP2-201ENST00000458402 793 ntBASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 RN7SL303P-201ENST00000469773 251 ntBASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 VN1R105P-201ENST00000486595 910 ntBASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 AC017037.2-201ENST00000513850 890 ntBASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 MTND1P24-201ENST00000552175 861 ntBASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 SETP2-201ENST00000553886 926 ntBASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 AC002400.1-201ENST00000569310 726 ntBASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 MIR4760-201ENST00000585040 80 ntBASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 AL133507.1-201ENST00000605269 557 ntBASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 AL136981.2-201ENST00000617319 734 ntBASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
CHCHD3Q9NX63 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CHCHD3Q9NX63 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CHCHD3Q9NX63 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CHCHD3Q9NX63 RNU6-343P-201ENST00000364709 104 ntBASIC3.47□□□□□ -1.85
CHCHD3Q9NX63 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms