Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCM2LQ9NUG4 AL645937.1-201ENST00000641739 1652 ntBASIC4.5□□□□□ -1.69
CCM2LQ9NUG4 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.5□□□□□ -1.69
CCM2LQ9NUG4 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
CCM2LQ9NUG4 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCM2LQ9NUG4 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCM2LQ9NUG4 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCM2LQ9NUG4 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.49□□□□□ -1.69
CCM2LQ9NUG4 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
CCM2LQ9NUG4 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCM2LQ9NUG4 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.49□□□□□ -1.69
CCM2LQ9NUG4 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.49□□□□□ -1.69
CCM2LQ9NUG4 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCM2LQ9NUG4 Y_RNA.88-201ENST00000363029 99 ntBASIC4.49□□□□□ -1.69
CCM2LQ9NUG4 Y_RNA.89-201ENST00000363031 102 ntBASIC4.49□□□□□ -1.69
CCM2LQ9NUG4 RNU6-511P-201ENST00000363496 107 ntBASIC4.49□□□□□ -1.69
CCM2LQ9NUG4 RNU6-483P-201ENST00000384088 108 ntBASIC4.49□□□□□ -1.69
CCM2LQ9NUG4 MIR135A2-201ENST00000384854 100 ntBASIC4.49□□□□□ -1.69
CCM2LQ9NUG4 RNU2-43P-201ENST00000410306 190 ntBASIC4.49□□□□□ -1.69
CCM2LQ9NUG4 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CCM2LQ9NUG4 USP9YP6-201ENST00000413550 854 ntBASIC4.49□□□□□ -1.69
CCM2LQ9NUG4 MTCO3P12-201ENST00000416718 547 ntBASIC4.49□□□□□ -1.69
CCM2LQ9NUG4 MRPL50P2-201ENST00000416821 482 ntBASIC4.49□□□□□ -1.69
CCM2LQ9NUG4 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.49□□□□□ -1.69
CCM2LQ9NUG4 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.49□□□□□ -1.69
CCM2LQ9NUG4 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.49□□□□□ -1.69
CCM2LQ9NUG4 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CCM2LQ9NUG4 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.49□□□□□ -1.69
CCM2LQ9NUG4 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.49□□□□□ -1.69
CCM2LQ9NUG4 AC073264.2-201ENST00000448886 166 ntBASIC4.49□□□□□ -1.69
CCM2LQ9NUG4 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.49□□□□□ -1.69
CCM2LQ9NUG4 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.49□□□□□ -1.69
CCM2LQ9NUG4 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.49□□□□□ -1.69
CCM2LQ9NUG4 RPL36AP51-201ENST00000487216 318 ntBASIC4.49□□□□□ -1.69
CCM2LQ9NUG4 AC114797.1-201ENST00000514003 728 ntBASIC4.49□□□□□ -1.69
CCM2LQ9NUG4 RN7SKP260-201ENST00000516907 149 ntBASIC4.49□□□□□ -1.69
CCM2LQ9NUG4 RNU6-64P-201ENST00000517119 105 ntBASIC4.49□□□□□ -1.69
CCM2LQ9NUG4 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC4.49□□□□□ -1.69
CCM2LQ9NUG4 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.49□□□□□ -1.69
CCM2LQ9NUG4 MTND1P35-201ENST00000526739 508 ntBASIC4.49□□□□□ -1.69
CCM2LQ9NUG4 AC104383.1-201ENST00000530297 370 ntBASIC4.49□□□□□ -1.69
CCM2LQ9NUG4 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.49□□□□□ -1.69
CCM2LQ9NUG4 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.49□□□□□ -1.69
CCM2LQ9NUG4 AC128657.1-201ENST00000549459 145 ntBASIC4.49□□□□□ -1.69
CCM2LQ9NUG4 AL121603.1-201ENST00000553815 142 ntBASIC4.49□□□□□ -1.69
CCM2LQ9NUG4 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.49□□□□□ -1.69
CCM2LQ9NUG4 PARP1P2-201ENST00000556806 195 ntBASIC4.49□□□□□ -1.69
CCM2LQ9NUG4 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.49□□□□□ -1.69
CCM2LQ9NUG4 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.49□□□□□ -1.69
CCM2LQ9NUG4 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.49□□□□□ -1.69
CCM2LQ9NUG4 AL162413.1-201ENST00000603198 110 ntBASIC4.49□□□□□ -1.69
CCM2LQ9NUG4 AC025449.1-201ENST00000603896 529 ntBASIC4.49□□□□□ -1.69
CCM2LQ9NUG4 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.49□□□□□ -1.69
CCM2LQ9NUG4 AC002553.4-201ENST00000616896 331 ntBASIC4.49□□□□□ -1.69
CCM2LQ9NUG4 MIR7703-201ENST00000620784 77 ntBASIC4.49□□□□□ -1.69
CCM2LQ9NUG4 MIR4275-201ENST00000636486 87 ntBASIC4.49□□□□□ -1.69
CCM2LQ9NUG4 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.49□□□□□ -1.69
CCM2LQ9NUG4 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.49□□□□□ -1.69
CCM2LQ9NUG4 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.49□□□□□ -1.69
CCM2LQ9NUG4 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CCM2LQ9NUG4 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCM2LQ9NUG4 AL365440.1-201ENST00000436135 2167 ntBASIC4.48□□□□□ -1.69
CCM2LQ9NUG4 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.48□□□□□ -1.69
CCM2LQ9NUG4 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCM2LQ9NUG4 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.48□□□□□ -1.69
CCM2LQ9NUG4 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CCM2LQ9NUG4 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCM2LQ9NUG4 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.48□□□□□ -1.69
CCM2LQ9NUG4 RNU6-534P-201ENST00000364877 106 ntBASIC4.48□□□□□ -1.69
CCM2LQ9NUG4 Y_RNA.295-201ENST00000364918 102 ntBASIC4.48□□□□□ -1.69
CCM2LQ9NUG4 RNU6-877P-201ENST00000383868 107 ntBASIC4.48□□□□□ -1.69
CCM2LQ9NUG4 SNORD3H-201ENST00000384486 214 ntBASIC4.48□□□□□ -1.69
CCM2LQ9NUG4 RNA5SP107-201ENST00000411358 122 ntBASIC4.48□□□□□ -1.69
CCM2LQ9NUG4 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CCM2LQ9NUG4 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.48□□□□□ -1.69
CCM2LQ9NUG4 TBCAP2-201ENST00000416175 326 ntBASIC4.48□□□□□ -1.69
CCM2LQ9NUG4 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.48□□□□□ -1.69
CCM2LQ9NUG4 DDX39BP1-205ENST00000422507 192 ntBASIC4.48□□□□□ -1.69
CCM2LQ9NUG4 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.48□□□□□ -1.69
CCM2LQ9NUG4 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.48□□□□□ -1.69
CCM2LQ9NUG4 MED13P1-201ENST00000428342 171 ntBASIC4.48□□□□□ -1.69
CCM2LQ9NUG4 HMGB1P31-201ENST00000437242 427 ntBASIC4.48□□□□□ -1.69
CCM2LQ9NUG4 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.48□□□□□ -1.69
CCM2LQ9NUG4 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.48□□□□□ -1.69
CCM2LQ9NUG4 AL162389.1-201ENST00000449233 177 ntBASIC4.48□□□□□ -1.69
CCM2LQ9NUG4 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.48□□□□□ -1.69
CCM2LQ9NUG4 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC4.48□□□□□ -1.69
CCM2LQ9NUG4 RAD23BP3-201ENST00000454157 1152 ntBASIC4.48□□□□□ -1.69
CCM2LQ9NUG4 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.48□□□□□ -1.69
CCM2LQ9NUG4 RPS23P7-201ENST00000466210 444 ntBASIC4.48□□□□□ -1.69
CCM2LQ9NUG4 AC083798.1-201ENST00000472671 131 ntBASIC4.48□□□□□ -1.69
CCM2LQ9NUG4 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.48□□□□□ -1.69
CCM2LQ9NUG4 RNA5SP446-201ENST00000515955 82 ntBASIC4.48□□□□□ -1.69
CCM2LQ9NUG4 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.48□□□□□ -1.69
CCM2LQ9NUG4 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.48□□□□□ -1.69
CCM2LQ9NUG4 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.48□□□□□ -1.69
CCM2LQ9NUG4 DYNLL1P4-201ENST00000549314 266 ntBASIC4.48□□□□□ -1.69
CCM2LQ9NUG4 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.48□□□□□ -1.69
CCM2LQ9NUG4 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.48□□□□□ -1.69
CCM2LQ9NUG4 MTND6P33-201ENST00000571794 183 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms