Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.78□□□□□ -1.96
TREX1Q9NSU2 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
TREX1Q9NSU2 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
TREX1Q9NSU2 CUL1P1-201ENST00000509510 2425 ntBASIC2.78□□□□□ -1.97
TREX1Q9NSU2 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.97
TREX1Q9NSU2 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
TREX1Q9NSU2 RNA5SP139-201ENST00000364340 117 ntBASIC2.77□□□□□ -1.97
TREX1Q9NSU2 SNORA18.3-201ENST00000384122 132 ntBASIC2.77□□□□□ -1.97
TREX1Q9NSU2 RNU6-921P-201ENST00000384361 107 ntBASIC2.77□□□□□ -1.97
TREX1Q9NSU2 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
TREX1Q9NSU2 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC2.77□□□□□ -1.97
TREX1Q9NSU2 AL035410.1-201ENST00000427409 427 ntBASIC2.77□□□□□ -1.97
TREX1Q9NSU2 AC006548.1-201ENST00000427470 102 ntBASIC2.77□□□□□ -1.97
TREX1Q9NSU2 RPS20P5-201ENST00000434808 360 ntBASIC2.77□□□□□ -1.97
TREX1Q9NSU2 YWHAZP7-201ENST00000436906 631 ntBASIC2.77□□□□□ -1.97
TREX1Q9NSU2 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.77□□□□□ -1.97
TREX1Q9NSU2 BTBD7P2-201ENST00000441962 620 ntBASIC2.77□□□□□ -1.97
TREX1Q9NSU2 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.77□□□□□ -1.97
TREX1Q9NSU2 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.77□□□□□ -1.97
TREX1Q9NSU2 RNA5SP310-201ENST00000459084 116 ntBASIC2.77□□□□□ -1.97
TREX1Q9NSU2 RPL30P14-201ENST00000482744 348 ntBASIC2.77□□□□□ -1.97
TREX1Q9NSU2 RN7SL297P-201ENST00000483161 293 ntBASIC2.77□□□□□ -1.97
TREX1Q9NSU2 RPL21P131-201ENST00000497298 483 ntBASIC2.77□□□□□ -1.97
TREX1Q9NSU2 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC2.77□□□□□ -1.97
TREX1Q9NSU2 AC112518.2-201ENST00000508565 425 ntBASIC2.77□□□□□ -1.97
TREX1Q9NSU2 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.77□□□□□ -1.97
TREX1Q9NSU2 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.77□□□□□ -1.97
TREX1Q9NSU2 AP001804.3-201ENST00000525146 880 ntBASIC2.77□□□□□ -1.97
TREX1Q9NSU2 LSM6P2-201ENST00000552208 177 ntBASIC2.77□□□□□ -1.97
TREX1Q9NSU2 AADACP1-206ENST00000561502 1193 ntBASIC2.77□□□□□ -1.97
TREX1Q9NSU2 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.77□□□□□ -1.97
TREX1Q9NSU2 CYCSP39-201ENST00000565821 309 ntBASIC2.77□□□□□ -1.97
TREX1Q9NSU2 RN7SL622P-201ENST00000585292 275 ntBASIC2.77□□□□□ -1.97
TREX1Q9NSU2 AC245036.5-201ENST00000596330 847 ntBASIC2.77□□□□□ -1.97
TREX1Q9NSU2 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.77□□□□□ -1.97
TREX1Q9NSU2 XIAPP1-201ENST00000603162 600 ntBASIC2.77□□□□□ -1.97
TREX1Q9NSU2 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.77□□□□□ -1.97
TREX1Q9NSU2 AC093732.2-201ENST00000607950 274 ntBASIC2.77□□□□□ -1.97
TREX1Q9NSU2 AC008083.4-201ENST00000615076 444 ntBASIC2.77□□□□□ -1.97
TREX1Q9NSU2 CR381653.2-201ENST00000624041 768 ntBASIC2.77□□□□□ -1.97
TREX1Q9NSU2 CR381572.1-201ENST00000625098 102 ntBASIC2.77□□□□□ -1.97
TREX1Q9NSU2 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.77□□□□□ -1.97
TREX1Q9NSU2 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
TREX1Q9NSU2 AL590396.4-201ENST00000636779 956 ntBASIC2.77□□□□□ -1.97
TREX1Q9NSU2 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
TREX1Q9NSU2 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.77□□□□□ -1.97
TREX1Q9NSU2 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.77□□□□□ -1.97
TREX1Q9NSU2 AC091564.4-201ENST00000533934 2194 ntBASIC2.77□□□□□ -1.97
TREX1Q9NSU2 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
TREX1Q9NSU2 SGO1P2-201ENST00000429458 1589 ntBASIC2.76□□□□□ -1.97
TREX1Q9NSU2 RNU6-989P-201ENST00000362756 107 ntBASIC2.76□□□□□ -1.97
TREX1Q9NSU2 RNU6-1249P-201ENST00000363237 111 ntBASIC2.76□□□□□ -1.97
TREX1Q9NSU2 RNA5SP344-201ENST00000411081 104 ntBASIC2.76□□□□□ -1.97
TREX1Q9NSU2 OR51A3P-201ENST00000413596 924 ntBASIC2.76□□□□□ -1.97
TREX1Q9NSU2 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.76□□□□□ -1.97
TREX1Q9NSU2 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC2.76□□□□□ -1.97
TREX1Q9NSU2 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.76□□□□□ -1.97
TREX1Q9NSU2 AC093151.1-201ENST00000427711 313 ntBASIC2.76□□□□□ -1.97
TREX1Q9NSU2 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.76□□□□□ -1.97
TREX1Q9NSU2 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.76□□□□□ -1.97
TREX1Q9NSU2 AC002542.1-201ENST00000440683 193 ntBASIC2.76□□□□□ -1.97
TREX1Q9NSU2 AL353718.1-201ENST00000451028 517 ntBASIC2.76□□□□□ -1.97
TREX1Q9NSU2 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
TREX1Q9NSU2 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
TREX1Q9NSU2 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
TREX1Q9NSU2 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.76□□□□□ -1.97
TREX1Q9NSU2 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.76□□□□□ -1.97
TREX1Q9NSU2 AC009901.1-201ENST00000506703 541 ntBASIC2.76□□□□□ -1.97
TREX1Q9NSU2 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
TREX1Q9NSU2 SNORA74D-201ENST00000516404 141 ntBASIC2.76□□□□□ -1.97
TREX1Q9NSU2 AC104986.1-201ENST00000517978 436 ntBASIC2.76□□□□□ -1.97
TREX1Q9NSU2 AC113192.3-201ENST00000529152 742 ntBASIC2.76□□□□□ -1.97
TREX1Q9NSU2 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
TREX1Q9NSU2 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.76□□□□□ -1.97
TREX1Q9NSU2 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.76□□□□□ -1.97
TREX1Q9NSU2 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC2.76□□□□□ -1.97
TREX1Q9NSU2 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.76□□□□□ -1.97
TREX1Q9NSU2 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
TREX1Q9NSU2 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
TREX1Q9NSU2 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.76□□□□□ -1.97
TREX1Q9NSU2 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
TREX1Q9NSU2 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.76□□□□□ -1.97
TREX1Q9NSU2 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
TREX1Q9NSU2 RNA5SP387-201ENST00000364226 106 ntBASIC2.75□□□□□ -1.97
TREX1Q9NSU2 SNORD56.5-201ENST00000364281 72 ntBASIC2.75□□□□□ -1.97
TREX1Q9NSU2 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.75□□□□□ -1.97
TREX1Q9NSU2 AP002784.2-201ENST00000397300 549 ntBASIC2.75□□□□□ -1.97
TREX1Q9NSU2 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.75□□□□□ -1.97
TREX1Q9NSU2 AC009237.2-201ENST00000421358 284 ntBASIC2.75□□□□□ -1.97
TREX1Q9NSU2 AL645937.1-202ENST00000421799 937 ntBASIC2.75□□□□□ -1.97
TREX1Q9NSU2 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.75□□□□□ -1.97
TREX1Q9NSU2 AC112220.1-201ENST00000434628 355 ntBASIC2.75□□□□□ -1.97
TREX1Q9NSU2 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.75□□□□□ -1.97
TREX1Q9NSU2 MTND4P15-201ENST00000437913 1033 ntBASIC2.75□□□□□ -1.97
TREX1Q9NSU2 AL135938.1-201ENST00000443141 297 ntBASIC2.75□□□□□ -1.97
TREX1Q9NSU2 UBBP3-201ENST00000445497 241 ntBASIC2.75□□□□□ -1.97
TREX1Q9NSU2 NANOGNBP1-201ENST00000448444 480 ntBASIC2.75□□□□□ -1.97
TREX1Q9NSU2 AC104073.1-201ENST00000451988 151 ntBASIC2.75□□□□□ -1.97
TREX1Q9NSU2 GTF2IP12-201ENST00000456547 356 ntBASIC2.75□□□□□ -1.97
TREX1Q9NSU2 OR6K1P-201ENST00000456766 971 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms