Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HPS4Q9NQG7 DEFB109C-201ENST00000382575 264 ntBASIC3.43□□□□□ -1.86
HPS4Q9NQG7 DEFB109B-201ENST00000382656 264 ntBASIC3.43□□□□□ -1.86
HPS4Q9NQG7 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
HPS4Q9NQG7 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
HPS4Q9NQG7 SNORA40.2-201ENST00000390847 128 ntBASIC3.43□□□□□ -1.86
HPS4Q9NQG7 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HPS4Q9NQG7 RNU2-42P-201ENST00000410697 113 ntBASIC3.43□□□□□ -1.86
HPS4Q9NQG7 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.43□□□□□ -1.86
HPS4Q9NQG7 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.43□□□□□ -1.86
HPS4Q9NQG7 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HPS4Q9NQG7 DPPA2P1-201ENST00000428060 556 ntBASIC3.43□□□□□ -1.86
HPS4Q9NQG7 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.43□□□□□ -1.86
HPS4Q9NQG7 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.43□□□□□ -1.86
HPS4Q9NQG7 HSPE1P28-201ENST00000443139 211 ntBASIC3.43□□□□□ -1.86
HPS4Q9NQG7 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.43□□□□□ -1.86
HPS4Q9NQG7 AC092757.1-201ENST00000467293 467 ntBASIC3.43□□□□□ -1.86
HPS4Q9NQG7 S100A11P2-201ENST00000467589 312 ntBASIC3.43□□□□□ -1.86
HPS4Q9NQG7 AC020893.1-201ENST00000502452 580 ntBASIC3.43□□□□□ -1.86
HPS4Q9NQG7 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.43□□□□□ -1.86
HPS4Q9NQG7 AC113420.1-201ENST00000507903 571 ntBASIC3.43□□□□□ -1.86
HPS4Q9NQG7 MTCYBP16-201ENST00000509187 1129 ntBASIC3.43□□□□□ -1.86
HPS4Q9NQG7 SNORD59.2-201ENST00000516873 68 ntBASIC3.43□□□□□ -1.86
HPS4Q9NQG7 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.43□□□□□ -1.86
HPS4Q9NQG7 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.43□□□□□ -1.86
HPS4Q9NQG7 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HPS4Q9NQG7 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HPS4Q9NQG7 MTND3P13-201ENST00000574391 343 ntBASIC3.43□□□□□ -1.86
HPS4Q9NQG7 LARP7P2-201ENST00000575306 125 ntBASIC3.43□□□□□ -1.86
HPS4Q9NQG7 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.43□□□□□ -1.86
HPS4Q9NQG7 VN1R83P-201ENST00000595685 445 ntBASIC3.43□□□□□ -1.86
HPS4Q9NQG7 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.43□□□□□ -1.86
HPS4Q9NQG7 AL035411.2-201ENST00000604022 421 ntBASIC3.43□□□□□ -1.86
HPS4Q9NQG7 AL137843.1-201ENST00000605078 385 ntBASIC3.43□□□□□ -1.86
HPS4Q9NQG7 AL138478.1-201ENST00000612252 832 ntBASIC3.43□□□□□ -1.86
HPS4Q9NQG7 AC024257.5-201ENST00000612739 531 ntBASIC3.43□□□□□ -1.86
HPS4Q9NQG7 AC005332.6-201ENST00000613178 446 ntBASIC3.43□□□□□ -1.86
HPS4Q9NQG7 AC104763.3-201ENST00000613765 618 ntBASIC3.43□□□□□ -1.86
HPS4Q9NQG7 AC040168.1-201ENST00000623594 991 ntBASIC3.43□□□□□ -1.86
HPS4Q9NQG7 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.43□□□□□ -1.86
HPS4Q9NQG7 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
HPS4Q9NQG7 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HPS4Q9NQG7 GDI2P1-201ENST00000429312 1336 ntBASIC3.43□□□□□ -1.86
HPS4Q9NQG7 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HPS4Q9NQG7 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.43□□□□□ -1.86
HPS4Q9NQG7 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.42□□□□□ -1.86
HPS4Q9NQG7 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
HPS4Q9NQG7 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
HPS4Q9NQG7 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
HPS4Q9NQG7 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HPS4Q9NQG7 Y_RNA.25-201ENST00000362528 102 ntBASIC3.42□□□□□ -1.86
HPS4Q9NQG7 AP002088.1-201ENST00000382740 395 ntBASIC3.42□□□□□ -1.86
HPS4Q9NQG7 Y_RNA.472-201ENST00000384322 102 ntBASIC3.42□□□□□ -1.86
HPS4Q9NQG7 SNORD116-12-201ENST00000384468 92 ntBASIC3.42□□□□□ -1.86
HPS4Q9NQG7 MIR506-201ENST00000384998 124 ntBASIC3.42□□□□□ -1.86
HPS4Q9NQG7 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
HPS4Q9NQG7 U3.29-201ENST00000391296 212 ntBASIC3.42□□□□□ -1.86
HPS4Q9NQG7 UBA52P6-201ENST00000399822 382 ntBASIC3.42□□□□□ -1.86
HPS4Q9NQG7 RNA5SP129-201ENST00000410276 118 ntBASIC3.42□□□□□ -1.86
HPS4Q9NQG7 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HPS4Q9NQG7 AL161449.1-201ENST00000414531 1199 ntBASIC3.42□□□□□ -1.86
HPS4Q9NQG7 GTF2IP23-201ENST00000423746 351 ntBASIC3.42□□□□□ -1.86
HPS4Q9NQG7 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.42□□□□□ -1.86
HPS4Q9NQG7 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.42□□□□□ -1.86
HPS4Q9NQG7 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.42□□□□□ -1.86
HPS4Q9NQG7 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC3.42□□□□□ -1.86
HPS4Q9NQG7 VN1R10P-201ENST00000447106 875 ntBASIC3.42□□□□□ -1.86
HPS4Q9NQG7 AC104308.1-201ENST00000454621 333 ntBASIC3.42□□□□□ -1.86
HPS4Q9NQG7 RPS3AP43-201ENST00000479743 781 ntBASIC3.42□□□□□ -1.86
HPS4Q9NQG7 AC006445.1-201ENST00000491925 405 ntBASIC3.42□□□□□ -1.86
HPS4Q9NQG7 OR4G11P-201ENST00000492842 939 ntBASIC3.42□□□□□ -1.86
HPS4Q9NQG7 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.42□□□□□ -1.86
HPS4Q9NQG7 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HPS4Q9NQG7 AC010460.2-201ENST00000509054 677 ntBASIC3.42□□□□□ -1.86
HPS4Q9NQG7 AC113347.3-201ENST00000509113 148 ntBASIC3.42□□□□□ -1.86
HPS4Q9NQG7 APOOP4-201ENST00000513530 597 ntBASIC3.42□□□□□ -1.86
HPS4Q9NQG7 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.42□□□□□ -1.86
HPS4Q9NQG7 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.42□□□□□ -1.86
HPS4Q9NQG7 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.42□□□□□ -1.86
HPS4Q9NQG7 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.42□□□□□ -1.86
HPS4Q9NQG7 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.42□□□□□ -1.86
HPS4Q9NQG7 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.42□□□□□ -1.86
HPS4Q9NQG7 AL390838.2-201ENST00000602394 274 ntBASIC3.42□□□□□ -1.86
HPS4Q9NQG7 XIAPP1-201ENST00000603162 600 ntBASIC3.42□□□□□ -1.86
HPS4Q9NQG7 AC011458.1-201ENST00000604034 617 ntBASIC3.42□□□□□ -1.86
HPS4Q9NQG7 AC073657.2-201ENST00000605661 303 ntBASIC3.42□□□□□ -1.86
HPS4Q9NQG7 AC016877.3-201ENST00000606778 504 ntBASIC3.42□□□□□ -1.86
HPS4Q9NQG7 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.42□□□□□ -1.86
HPS4Q9NQG7 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.42□□□□□ -1.86
HPS4Q9NQG7 AC022149.2-201ENST00000621061 203 ntBASIC3.42□□□□□ -1.86
HPS4Q9NQG7 AC073348.1-201ENST00000623002 331 ntBASIC3.42□□□□□ -1.86
HPS4Q9NQG7 CYP3A51P-201ENST00000633513 256 ntBASIC3.42□□□□□ -1.86
HPS4Q9NQG7 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HPS4Q9NQG7 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HPS4Q9NQG7 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HPS4Q9NQG7 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
HPS4Q9NQG7 MTCO1P23-201ENST00000415223 1526 ntBASIC3.41□□□□□ -1.86
HPS4Q9NQG7 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HPS4Q9NQG7 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
HPS4Q9NQG7 SAR1AP2-201ENST00000392696 594 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms