Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.71□□□□□ -1.66
VPS11Q9H270 RPL31P35-201ENST00000431058 377 ntBASIC4.71□□□□□ -1.66
VPS11Q9H270 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC4.71□□□□□ -1.66
VPS11Q9H270 CKS1BP5-201ENST00000434172 273 ntBASIC4.71□□□□□ -1.66
VPS11Q9H270 AC127537.2-201ENST00000439258 465 ntBASIC4.71□□□□□ -1.66
VPS11Q9H270 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.71□□□□□ -1.66
VPS11Q9H270 RPL36AP15-201ENST00000444514 266 ntBASIC4.71□□□□□ -1.66
VPS11Q9H270 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.71□□□□□ -1.66
VPS11Q9H270 AL513533.1-201ENST00000453728 415 ntBASIC4.71□□□□□ -1.66
VPS11Q9H270 AL583843.1-201ENST00000456070 346 ntBASIC4.71□□□□□ -1.66
VPS11Q9H270 SNORD19B-201ENST00000459623 84 ntBASIC4.71□□□□□ -1.66
VPS11Q9H270 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS11Q9H270 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.71□□□□□ -1.66
VPS11Q9H270 BX284632.1-201ENST00000478218 541 ntBASIC4.71□□□□□ -1.66
VPS11Q9H270 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.71□□□□□ -1.66
VPS11Q9H270 AC012158.1-204ENST00000483430 465 ntBASIC4.71□□□□□ -1.66
VPS11Q9H270 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.71□□□□□ -1.66
VPS11Q9H270 RN7SKP66-201ENST00000516681 231 ntBASIC4.71□□□□□ -1.66
VPS11Q9H270 RNU6-835P-201ENST00000516974 104 ntBASIC4.71□□□□□ -1.66
VPS11Q9H270 AC090151.1-201ENST00000520784 730 ntBASIC4.71□□□□□ -1.66
VPS11Q9H270 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS11Q9H270 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS11Q9H270 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.71□□□□□ -1.66
VPS11Q9H270 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.71□□□□□ -1.66
VPS11Q9H270 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS11Q9H270 AC133555.2-201ENST00000550213 292 ntBASIC4.71□□□□□ -1.66
VPS11Q9H270 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS11Q9H270 AL845331.3-202ENST00000562856 261 ntBASIC4.71□□□□□ -1.66
VPS11Q9H270 MIR4503-201ENST00000582187 83 ntBASIC4.71□□□□□ -1.66
VPS11Q9H270 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS11Q9H270 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS11Q9H270 HMGN1P30-201ENST00000589286 268 ntBASIC4.71□□□□□ -1.66
VPS11Q9H270 AL669831.4-202ENST00000590817 238 ntBASIC4.71□□□□□ -1.66
VPS11Q9H270 RPL26P30-202ENST00000602923 645 ntBASIC4.71□□□□□ -1.66
VPS11Q9H270 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.71□□□□□ -1.66
VPS11Q9H270 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.71□□□□□ -1.66
VPS11Q9H270 EIF3FP1-201ENST00000613970 806 ntBASIC4.71□□□□□ -1.66
VPS11Q9H270 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC4.71□□□□□ -1.66
VPS11Q9H270 MIR7154-201ENST00000620673 73 ntBASIC4.71□□□□□ -1.66
VPS11Q9H270 AL732618.1-201ENST00000623251 301 ntBASIC4.71□□□□□ -1.66
VPS11Q9H270 AL078596.1-201ENST00000624856 447 ntBASIC4.71□□□□□ -1.66
VPS11Q9H270 NUP58P1-201ENST00000502546 1738 ntBASIC4.71□□□□□ -1.66
VPS11Q9H270 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.71□□□□□ -1.66
VPS11Q9H270 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
VPS11Q9H270 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
VPS11Q9H270 AL136964.1-201ENST00000622038 2990 ntBASIC4.71□□□□□ -1.66
VPS11Q9H270 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VPS11Q9H270 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
VPS11Q9H270 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.7□□□□□ -1.66
VPS11Q9H270 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VPS11Q9H270 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.7□□□□□ -1.66
VPS11Q9H270 RNU6-462P-201ENST00000362659 105 ntBASIC4.7□□□□□ -1.66
VPS11Q9H270 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VPS11Q9H270 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.7□□□□□ -1.66
VPS11Q9H270 RNU6-1279P-201ENST00000383917 103 ntBASIC4.7□□□□□ -1.66
VPS11Q9H270 RNU6-196P-201ENST00000384315 107 ntBASIC4.7□□□□□ -1.66
VPS11Q9H270 RNU6-171P-201ENST00000384354 107 ntBASIC4.7□□□□□ -1.66
VPS11Q9H270 RNU1-82P-201ENST00000390851 165 ntBASIC4.7□□□□□ -1.66
VPS11Q9H270 MTCYBP8-201ENST00000422855 651 ntBASIC4.7□□□□□ -1.66
VPS11Q9H270 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.7□□□□□ -1.66
VPS11Q9H270 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.7□□□□□ -1.66
VPS11Q9H270 AL591212.2-201ENST00000433923 257 ntBASIC4.7□□□□□ -1.66
VPS11Q9H270 CBWD4P-201ENST00000445695 655 ntBASIC4.7□□□□□ -1.66
VPS11Q9H270 RPL7P12-201ENST00000446719 750 ntBASIC4.7□□□□□ -1.66
VPS11Q9H270 H2AFZP5-201ENST00000446960 382 ntBASIC4.7□□□□□ -1.66
VPS11Q9H270 SLC25A18P1-201ENST00000449385 454 ntBASIC4.7□□□□□ -1.66
VPS11Q9H270 DHFRP3-201ENST00000455595 559 ntBASIC4.7□□□□□ -1.66
VPS11Q9H270 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VPS11Q9H270 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4.7□□□□□ -1.66
VPS11Q9H270 AC026782.1-201ENST00000512952 449 ntBASIC4.7□□□□□ -1.66
VPS11Q9H270 RNU4-60P-201ENST00000517239 135 ntBASIC4.7□□□□□ -1.66
VPS11Q9H270 AP003467.2-201ENST00000520175 319 ntBASIC4.7□□□□□ -1.66
VPS11Q9H270 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.7□□□□□ -1.66
VPS11Q9H270 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.7□□□□□ -1.66
VPS11Q9H270 DEFB109D-201ENST00000529497 240 ntBASIC4.7□□□□□ -1.66
VPS11Q9H270 OR5BN1P-201ENST00000532955 829 ntBASIC4.7□□□□□ -1.66
VPS11Q9H270 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC4.7□□□□□ -1.66
VPS11Q9H270 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.7□□□□□ -1.66
VPS11Q9H270 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.7□□□□□ -1.66
VPS11Q9H270 SCOCP1-201ENST00000554676 349 ntBASIC4.7□□□□□ -1.66
VPS11Q9H270 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.7□□□□□ -1.66
VPS11Q9H270 AC110588.1-201ENST00000559699 137 ntBASIC4.7□□□□□ -1.66
VPS11Q9H270 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.7□□□□□ -1.66
VPS11Q9H270 AC055876.1-202ENST00000567053 138 ntBASIC4.7□□□□□ -1.66
VPS11Q9H270 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VPS11Q9H270 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.7□□□□□ -1.66
VPS11Q9H270 MIR3691-201ENST00000578066 90 ntBASIC4.7□□□□□ -1.66
VPS11Q9H270 MIR4489-201ENST00000578869 62 ntBASIC4.7□□□□□ -1.66
VPS11Q9H270 MIR1269B-201ENST00000580405 75 ntBASIC4.7□□□□□ -1.66
VPS11Q9H270 AC100830.2-201ENST00000581636 240 ntBASIC4.7□□□□□ -1.66
VPS11Q9H270 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.7□□□□□ -1.66
VPS11Q9H270 AC006116.3-201ENST00000592968 361 ntBASIC4.7□□□□□ -1.66
VPS11Q9H270 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.7□□□□□ -1.66
VPS11Q9H270 AC020910.3-201ENST00000603701 874 ntBASIC4.7□□□□□ -1.66
VPS11Q9H270 uc_338.5-201ENST00000611839 155 ntBASIC4.7□□□□□ -1.66
VPS11Q9H270 AC068831.8-201ENST00000620171 435 ntBASIC4.7□□□□□ -1.66
VPS11Q9H270 AC006065.5-201ENST00000623427 349 ntBASIC4.7□□□□□ -1.66
VPS11Q9H270 AC138649.5-201ENST00000637456 137 ntBASIC4.7□□□□□ -1.66
VPS11Q9H270 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VPS11Q9H270 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms