Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SALL3Q9BXA9 Y_RNA.25-201ENST00000362528 102 ntBASIC4.61□□□□□ -1.67
SALL3Q9BXA9 RNA5SP97-201ENST00000365006 84 ntBASIC4.61□□□□□ -1.67
SALL3Q9BXA9 Y_RNA.453-201ENST00000384223 109 ntBASIC4.61□□□□□ -1.67
SALL3Q9BXA9 MIR134-201ENST00000385258 73 ntBASIC4.61□□□□□ -1.67
SALL3Q9BXA9 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
SALL3Q9BXA9 FCF1P10-201ENST00000407590 479 ntBASIC4.61□□□□□ -1.67
SALL3Q9BXA9 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.61□□□□□ -1.67
SALL3Q9BXA9 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.61□□□□□ -1.67
SALL3Q9BXA9 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.61□□□□□ -1.67
SALL3Q9BXA9 MTND4LP10-201ENST00000435146 291 ntBASIC4.61□□□□□ -1.67
SALL3Q9BXA9 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SALL3Q9BXA9 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.61□□□□□ -1.67
SALL3Q9BXA9 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.61□□□□□ -1.67
SALL3Q9BXA9 AMD1P1-201ENST00000457220 922 ntBASIC4.61□□□□□ -1.67
SALL3Q9BXA9 AC091564.1-201ENST00000464563 479 ntBASIC4.61□□□□□ -1.67
SALL3Q9BXA9 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.61□□□□□ -1.67
SALL3Q9BXA9 AC015724.1-201ENST00000478577 156 ntBASIC4.61□□□□□ -1.67
SALL3Q9BXA9 AC092989.1-201ENST00000481235 277 ntBASIC4.61□□□□□ -1.67
SALL3Q9BXA9 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.61□□□□□ -1.67
SALL3Q9BXA9 DEFB131D-201ENST00000526803 184 ntBASIC4.61□□□□□ -1.67
SALL3Q9BXA9 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.61□□□□□ -1.67
SALL3Q9BXA9 AP002748.2-201ENST00000528671 348 ntBASIC4.61□□□□□ -1.67
SALL3Q9BXA9 AP004247.1-201ENST00000531556 1289 ntBASIC4.61□□□□□ -1.67
SALL3Q9BXA9 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.61□□□□□ -1.67
SALL3Q9BXA9 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SALL3Q9BXA9 AC034105.4-201ENST00000568304 277 ntBASIC4.61□□□□□ -1.67
SALL3Q9BXA9 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.61□□□□□ -1.67
SALL3Q9BXA9 BNIP3P8-201ENST00000597863 560 ntBASIC4.61□□□□□ -1.67
SALL3Q9BXA9 AC245389.1-201ENST00000605141 529 ntBASIC4.61□□□□□ -1.67
SALL3Q9BXA9 AL390208.1-201ENST00000605885 644 ntBASIC4.61□□□□□ -1.67
SALL3Q9BXA9 AP001506.1-201ENST00000615444 211 ntBASIC4.61□□□□□ -1.67
SALL3Q9BXA9 AC104260.1-201ENST00000616660 539 ntBASIC4.61□□□□□ -1.67
SALL3Q9BXA9 AC103858.2-201ENST00000621471 543 ntBASIC4.61□□□□□ -1.67
SALL3Q9BXA9 AC067931.1-201ENST00000624190 671 ntBASIC4.61□□□□□ -1.67
SALL3Q9BXA9 CRYM-AS1-204ENST00000637983 556 ntBASIC4.61□□□□□ -1.67
SALL3Q9BXA9 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.61□□□□□ -1.67
SALL3Q9BXA9 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.61□□□□□ -1.67
SALL3Q9BXA9 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SALL3Q9BXA9 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SALL3Q9BXA9 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SALL3Q9BXA9 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SALL3Q9BXA9 NCAPGP1-201ENST00000505112 1814 ntBASIC4.61□□□□□ -1.67
SALL3Q9BXA9 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
SALL3Q9BXA9 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SALL3Q9BXA9 ZNF37BP-203ENST00000452306 1352 ntBASIC4.6□□□□□ -1.67
SALL3Q9BXA9 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SALL3Q9BXA9 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
SALL3Q9BXA9 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
SALL3Q9BXA9 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SALL3Q9BXA9 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
SALL3Q9BXA9 RNU6-1122P-201ENST00000384449 107 ntBASIC4.6□□□□□ -1.67
SALL3Q9BXA9 MIR30B-201ENST00000384850 88 ntBASIC4.6□□□□□ -1.67
SALL3Q9BXA9 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
SALL3Q9BXA9 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
SALL3Q9BXA9 RPL7P60-201ENST00000397636 735 ntBASIC4.6□□□□□ -1.67
SALL3Q9BXA9 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.6□□□□□ -1.67
SALL3Q9BXA9 RPL31P52-201ENST00000407532 367 ntBASIC4.6□□□□□ -1.67
SALL3Q9BXA9 HMGB1P11-201ENST00000413899 637 ntBASIC4.6□□□□□ -1.67
SALL3Q9BXA9 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.6□□□□□ -1.67
SALL3Q9BXA9 AL139413.1-201ENST00000421309 217 ntBASIC4.6□□□□□ -1.67
SALL3Q9BXA9 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.6□□□□□ -1.67
SALL3Q9BXA9 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SALL3Q9BXA9 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.6□□□□□ -1.67
SALL3Q9BXA9 RPS24P8-201ENST00000431490 402 ntBASIC4.6□□□□□ -1.67
SALL3Q9BXA9 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.6□□□□□ -1.67
SALL3Q9BXA9 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.6□□□□□ -1.67
SALL3Q9BXA9 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
SALL3Q9BXA9 AL022238.1-201ENST00000442557 355 ntBASIC4.6□□□□□ -1.67
SALL3Q9BXA9 GDI2P2-201ENST00000445131 608 ntBASIC4.6□□□□□ -1.67
SALL3Q9BXA9 RPL39P6-201ENST00000448289 150 ntBASIC4.6□□□□□ -1.67
SALL3Q9BXA9 NFU1P2-201ENST00000448700 469 ntBASIC4.6□□□□□ -1.67
SALL3Q9BXA9 SLC31A1P1-201ENST00000451221 567 ntBASIC4.6□□□□□ -1.67
SALL3Q9BXA9 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.6□□□□□ -1.67
SALL3Q9BXA9 SNORA84-201ENST00000459229 133 ntBASIC4.6□□□□□ -1.67
SALL3Q9BXA9 AL133162.1-201ENST00000463228 453 ntBASIC4.6□□□□□ -1.67
SALL3Q9BXA9 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.6□□□□□ -1.67
SALL3Q9BXA9 AP002812.1-201ENST00000495378 474 ntBASIC4.6□□□□□ -1.67
SALL3Q9BXA9 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.6□□□□□ -1.67
SALL3Q9BXA9 AC021678.1-201ENST00000505195 936 ntBASIC4.6□□□□□ -1.67
SALL3Q9BXA9 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.6□□□□□ -1.67
SALL3Q9BXA9 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.6□□□□□ -1.67
SALL3Q9BXA9 AC098799.2-201ENST00000509466 868 ntBASIC4.6□□□□□ -1.67
SALL3Q9BXA9 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
SALL3Q9BXA9 HIGD1AP6-201ENST00000521833 279 ntBASIC4.6□□□□□ -1.67
SALL3Q9BXA9 AC022695.1-201ENST00000522089 237 ntBASIC4.6□□□□□ -1.67
SALL3Q9BXA9 AC104383.1-201ENST00000530297 370 ntBASIC4.6□□□□□ -1.67
SALL3Q9BXA9 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.6□□□□□ -1.67
SALL3Q9BXA9 CYCSP30-201ENST00000546447 172 ntBASIC4.6□□□□□ -1.67
SALL3Q9BXA9 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.6□□□□□ -1.67
SALL3Q9BXA9 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.6□□□□□ -1.67
SALL3Q9BXA9 AC093519.1-201ENST00000566109 298 ntBASIC4.6□□□□□ -1.67
SALL3Q9BXA9 MIR4716-201ENST00000579628 84 ntBASIC4.6□□□□□ -1.67
SALL3Q9BXA9 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.6□□□□□ -1.67
SALL3Q9BXA9 VN1R84P-201ENST00000593697 235 ntBASIC4.6□□□□□ -1.67
SALL3Q9BXA9 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.6□□□□□ -1.67
SALL3Q9BXA9 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.6□□□□□ -1.67
SALL3Q9BXA9 AC092954.2-201ENST00000609103 430 ntBASIC4.6□□□□□ -1.67
SALL3Q9BXA9 TUG1_1.1-201ENST00000610654 145 ntBASIC4.6□□□□□ -1.67
SALL3Q9BXA9 AC136475.10-201ENST00000620253 385 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms