Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.8□□□□□ -1.48
USB1Q9BQ65 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
USB1Q9BQ65 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
USB1Q9BQ65 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
USB1Q9BQ65 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.8□□□□□ -1.48
USB1Q9BQ65 U3.6-201ENST00000363622 211 ntBASIC5.8□□□□□ -1.48
USB1Q9BQ65 RNA5SP485-201ENST00000365053 119 ntBASIC5.8□□□□□ -1.48
USB1Q9BQ65 RNU6-326P-201ENST00000365480 107 ntBASIC5.8□□□□□ -1.48
USB1Q9BQ65 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
USB1Q9BQ65 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
USB1Q9BQ65 PRELID1P1-201ENST00000403549 660 ntBASIC5.8□□□□□ -1.48
USB1Q9BQ65 U3.39-201ENST00000408569 239 ntBASIC5.8□□□□□ -1.48
USB1Q9BQ65 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.8□□□□□ -1.48
USB1Q9BQ65 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.8□□□□□ -1.48
USB1Q9BQ65 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC5.8□□□□□ -1.48
USB1Q9BQ65 AL031659.1-201ENST00000447075 539 ntBASIC5.8□□□□□ -1.48
USB1Q9BQ65 AC097463.1-201ENST00000447288 481 ntBASIC5.8□□□□□ -1.48
USB1Q9BQ65 RPL10P17-201ENST00000453852 316 ntBASIC5.8□□□□□ -1.48
USB1Q9BQ65 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC5.8□□□□□ -1.48
USB1Q9BQ65 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.8□□□□□ -1.48
USB1Q9BQ65 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.8□□□□□ -1.48
USB1Q9BQ65 ANXA2P1-201ENST00000505539 926 ntBASIC5.8□□□□□ -1.48
USB1Q9BQ65 GMPSP1-201ENST00000514075 579 ntBASIC5.8□□□□□ -1.48
USB1Q9BQ65 Y_RNA.679-201ENST00000516416 91 ntBASIC5.8□□□□□ -1.48
USB1Q9BQ65 SNORA31.18-201ENST00000517043 134 ntBASIC5.8□□□□□ -1.48
USB1Q9BQ65 AC008489.1-201ENST00000524271 483 ntBASIC5.8□□□□□ -1.48
USB1Q9BQ65 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC5.8□□□□□ -1.48
USB1Q9BQ65 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.8□□□□□ -1.48
USB1Q9BQ65 AC002310.3-201ENST00000569728 723 ntBASIC5.8□□□□□ -1.48
USB1Q9BQ65 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
USB1Q9BQ65 MIR1273C-201ENST00000578669 77 ntBASIC5.8□□□□□ -1.48
USB1Q9BQ65 RPL23AP78-201ENST00000599928 470 ntBASIC5.8□□□□□ -1.48
USB1Q9BQ65 BRDTP1-201ENST00000605735 677 ntBASIC5.8□□□□□ -1.48
USB1Q9BQ65 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.8□□□□□ -1.48
USB1Q9BQ65 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.8□□□□□ -1.48
USB1Q9BQ65 AL359091.2-201ENST00000609303 556 ntBASIC5.8□□□□□ -1.48
USB1Q9BQ65 AC074140.1-201ENST00000621617 208 ntBASIC5.8□□□□□ -1.48
USB1Q9BQ65 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
USB1Q9BQ65 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.8□□□□□ -1.48
USB1Q9BQ65 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
USB1Q9BQ65 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
USB1Q9BQ65 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
USB1Q9BQ65 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
USB1Q9BQ65 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
USB1Q9BQ65 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.8□□□□□ -1.48
USB1Q9BQ65 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
USB1Q9BQ65 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
USB1Q9BQ65 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
USB1Q9BQ65 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
USB1Q9BQ65 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.8□□□□□ -1.48
USB1Q9BQ65 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC5.79□□□□□ -1.48
USB1Q9BQ65 COG2-209ENST00000534989 2963 ntTSL 2 BASIC5.79□□□□□ -1.48
USB1Q9BQ65 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
USB1Q9BQ65 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
USB1Q9BQ65 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
USB1Q9BQ65 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.79□□□□□ -1.48
USB1Q9BQ65 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.79□□□□□ -1.48
USB1Q9BQ65 AC022325.1-201ENST00000502748 2199 ntBASIC5.79□□□□□ -1.48
USB1Q9BQ65 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
USB1Q9BQ65 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.79□□□□□ -1.48
USB1Q9BQ65 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC5.79□□□□□ -1.48
USB1Q9BQ65 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.79□□□□□ -1.48
USB1Q9BQ65 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
USB1Q9BQ65 RPL24P4-201ENST00000326586 421 ntBASIC5.79□□□□□ -1.48
USB1Q9BQ65 RNA5SP85-201ENST00000365378 119 ntBASIC5.79□□□□□ -1.48
USB1Q9BQ65 SNORD63-201ENST00000384262 68 ntBASIC5.79□□□□□ -1.48
USB1Q9BQ65 RNU6-417P-201ENST00000384712 107 ntBASIC5.79□□□□□ -1.48
USB1Q9BQ65 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
USB1Q9BQ65 RNU6-918P-201ENST00000391219 106 ntBASIC5.79□□□□□ -1.48
USB1Q9BQ65 Y_RNA.590-201ENST00000410140 107 ntBASIC5.79□□□□□ -1.48
USB1Q9BQ65 RNA5SP251-201ENST00000410614 137 ntBASIC5.79□□□□□ -1.48
USB1Q9BQ65 RPL7AP73-201ENST00000413490 353 ntBASIC5.79□□□□□ -1.48
USB1Q9BQ65 BMS1P22-201ENST00000414726 313 ntBASIC5.79□□□□□ -1.48
USB1Q9BQ65 TMSB10P2-201ENST00000416049 131 ntBASIC5.79□□□□□ -1.48
USB1Q9BQ65 MRPS21P5-201ENST00000417885 231 ntBASIC5.79□□□□□ -1.48
USB1Q9BQ65 THEM7P-201ENST00000419556 672 ntBASIC5.79□□□□□ -1.48
USB1Q9BQ65 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.79□□□□□ -1.48
USB1Q9BQ65 AC234771.2-201ENST00000445718 597 ntBASIC5.79□□□□□ -1.48
USB1Q9BQ65 NUTF2P3-201ENST00000448540 384 ntBASIC5.79□□□□□ -1.48
USB1Q9BQ65 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC5.79□□□□□ -1.48
USB1Q9BQ65 RN7SL184P-201ENST00000488308 297 ntBASIC5.79□□□□□ -1.48
USB1Q9BQ65 AC083906.1-201ENST00000509298 406 ntBASIC5.79□□□□□ -1.48
USB1Q9BQ65 APOOP4-201ENST00000513530 597 ntBASIC5.79□□□□□ -1.48
USB1Q9BQ65 RNU6-143P-201ENST00000516942 93 ntBASIC5.79□□□□□ -1.48
USB1Q9BQ65 RNU2-31P-201ENST00000516954 155 ntBASIC5.79□□□□□ -1.48
USB1Q9BQ65 RNU6-1315P-201ENST00000517187 99 ntBASIC5.79□□□□□ -1.48
USB1Q9BQ65 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.79□□□□□ -1.48
USB1Q9BQ65 EDDM3DP-201ENST00000554692 434 ntBASIC5.79□□□□□ -1.48
USB1Q9BQ65 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.79□□□□□ -1.48
USB1Q9BQ65 AC037487.3-201ENST00000606668 112 ntBASIC5.79□□□□□ -1.48
USB1Q9BQ65 MIR6889-201ENST00000613185 59 ntBASIC5.79□□□□□ -1.48
USB1Q9BQ65 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
USB1Q9BQ65 AL596275.2-206ENST00000641957 626 ntBASIC5.79□□□□□ -1.48
USB1Q9BQ65 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
USB1Q9BQ65 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
USB1Q9BQ65 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
USB1Q9BQ65 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
USB1Q9BQ65 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
USB1Q9BQ65 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
USB1Q9BQ65 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms