Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.22□□□□□ -1.89
SSX3Q99909 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SSX3Q99909 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SSX3Q99909 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SSX3Q99909 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
SSX3Q99909 AL513185.3-201ENST00000433335 1300 ntBASIC3.21□□□□□ -1.89
SSX3Q99909 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.89
SSX3Q99909 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.89
SSX3Q99909 AC011460.1-201ENST00000636268 1834 ntBASIC3.21□□□□□ -1.89
SSX3Q99909 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.89
SSX3Q99909 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.21□□□□□ -1.89
SSX3Q99909 CUL1P1-201ENST00000509510 2425 ntBASIC3.21□□□□□ -1.9
SSX3Q99909 CR381670.1-201ENST00000624291 1693 ntBASIC3.21□□□□□ -1.9
SSX3Q99909 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
SSX3Q99909 RNA5SP97-201ENST00000365006 84 ntBASIC3.21□□□□□ -1.9
SSX3Q99909 RPS4XP3-201ENST00000398541 413 ntBASIC3.21□□□□□ -1.9
SSX3Q99909 RN7SKP27-201ENST00000410684 333 ntBASIC3.21□□□□□ -1.9
SSX3Q99909 RPL36AP36-201ENST00000418616 301 ntBASIC3.21□□□□□ -1.9
SSX3Q99909 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
SSX3Q99909 HIGD1AP4-201ENST00000430194 280 ntBASIC3.21□□□□□ -1.9
SSX3Q99909 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.21□□□□□ -1.9
SSX3Q99909 MTND5P14-201ENST00000441481 1267 ntBASIC3.21□□□□□ -1.9
SSX3Q99909 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.21□□□□□ -1.9
SSX3Q99909 EEF1E1P1-201ENST00000446998 430 ntBASIC3.21□□□□□ -1.9
SSX3Q99909 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.21□□□□□ -1.9
SSX3Q99909 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.21□□□□□ -1.9
SSX3Q99909 snoU13.8-201ENST00000458890 104 ntBASIC3.21□□□□□ -1.9
SSX3Q99909 RPL30P14-201ENST00000482744 348 ntBASIC3.21□□□□□ -1.9
SSX3Q99909 AC093278.1-201ENST00000494700 600 ntBASIC3.21□□□□□ -1.9
SSX3Q99909 AC004069.2-201ENST00000505438 1114 ntBASIC3.21□□□□□ -1.9
SSX3Q99909 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.21□□□□□ -1.9
SSX3Q99909 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.21□□□□□ -1.9
SSX3Q99909 AC093677.1-201ENST00000514414 678 ntBASIC3.21□□□□□ -1.9
SSX3Q99909 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.21□□□□□ -1.9
SSX3Q99909 SNORA31.1-201ENST00000515993 133 ntBASIC3.21□□□□□ -1.9
SSX3Q99909 SNORA31.5-201ENST00000516190 133 ntBASIC3.21□□□□□ -1.9
SSX3Q99909 AC023632.4-201ENST00000517783 191 ntBASIC3.21□□□□□ -1.9
SSX3Q99909 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC3.21□□□□□ -1.9
SSX3Q99909 COX6CP8-201ENST00000522620 226 ntBASIC3.21□□□□□ -1.9
SSX3Q99909 EEF1A1P37-201ENST00000522748 715 ntBASIC3.21□□□□□ -1.9
SSX3Q99909 MTCO1P49-201ENST00000523429 802 ntBASIC3.21□□□□□ -1.9
SSX3Q99909 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.21□□□□□ -1.9
SSX3Q99909 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.21□□□□□ -1.9
SSX3Q99909 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.21□□□□□ -1.9
SSX3Q99909 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.21□□□□□ -1.9
SSX3Q99909 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.21□□□□□ -1.9
SSX3Q99909 AL354943.1-201ENST00000572103 781 ntBASIC3.21□□□□□ -1.9
SSX3Q99909 RN7SL703P-201ENST00000578485 302 ntBASIC3.21□□□□□ -1.9
SSX3Q99909 MIR5685-201ENST00000579080 79 ntBASIC3.21□□□□□ -1.9
SSX3Q99909 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.21□□□□□ -1.9
SSX3Q99909 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.21□□□□□ -1.9
SSX3Q99909 AL031281.1-201ENST00000604049 488 ntBASIC3.21□□□□□ -1.9
SSX3Q99909 AC091167.4-201ENST00000605079 184 ntBASIC3.21□□□□□ -1.9
SSX3Q99909 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.21□□□□□ -1.9
SSX3Q99909 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SSX3Q99909 AL356863.1-201ENST00000623378 1080 ntBASIC3.21□□□□□ -1.9
SSX3Q99909 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
SSX3Q99909 PWAR6-201ENST00000552334 4618 ntBASIC3.21□□□□□ -1.9
SSX3Q99909 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SSX3Q99909 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SSX3Q99909 MAPK10-362ENST00000641864 4484 ntBASIC3.21□□□□□ -1.9
SSX3Q99909 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SSX3Q99909 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SSX3Q99909 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SSX3Q99909 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.2□□□□□ -1.9
SSX3Q99909 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.2□□□□□ -1.9
SSX3Q99909 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.2□□□□□ -1.9
SSX3Q99909 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
SSX3Q99909 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SSX3Q99909 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.2□□□□□ -1.9
SSX3Q99909 AC058791.1-201ENST00000608412 3198 ntBASIC3.2□□□□□ -1.9
SSX3Q99909 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SSX3Q99909 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SSX3Q99909 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.2□□□□□ -1.9
SSX3Q99909 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SSX3Q99909 MIR135A2-201ENST00000384854 100 ntBASIC3.2□□□□□ -1.9
SSX3Q99909 MIR554-201ENST00000384874 96 ntBASIC3.2□□□□□ -1.9
SSX3Q99909 RPS3AP26-201ENST00000398259 784 ntBASIC3.2□□□□□ -1.9
SSX3Q99909 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.2□□□□□ -1.9
SSX3Q99909 KCTD9P3-201ENST00000434597 1169 ntBASIC3.2□□□□□ -1.9
SSX3Q99909 SKP1P1-201ENST00000438081 489 ntBASIC3.2□□□□□ -1.9
SSX3Q99909 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.2□□□□□ -1.9
SSX3Q99909 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.2□□□□□ -1.9
SSX3Q99909 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SSX3Q99909 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.2□□□□□ -1.9
SSX3Q99909 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
SSX3Q99909 AC108860.1-201ENST00000484521 383 ntBASIC3.2□□□□□ -1.9
SSX3Q99909 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SSX3Q99909 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.2□□□□□ -1.9
SSX3Q99909 SNORA70.16-201ENST00000516390 95 ntBASIC3.2□□□□□ -1.9
SSX3Q99909 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.2□□□□□ -1.9
SSX3Q99909 AC239860.2-201ENST00000525886 270 ntBASIC3.2□□□□□ -1.9
SSX3Q99909 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SSX3Q99909 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC3.2□□□□□ -1.9
SSX3Q99909 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.2□□□□□ -1.9
SSX3Q99909 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.2□□□□□ -1.9
SSX3Q99909 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.2□□□□□ -1.9
SSX3Q99909 GNRHR2P1-201ENST00000555315 631 ntBASIC3.2□□□□□ -1.9
SSX3Q99909 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.2□□□□□ -1.9
SSX3Q99909 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms