Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 RPS15AP9-201ENST00000439856 381 ntBASIC5.12□□□□□ -1.59
CHAMP1Q96JM3 CEACAMP6-201ENST00000452007 574 ntBASIC5.12□□□□□ -1.59
CHAMP1Q96JM3 RPS27AP17-201ENST00000463344 455 ntBASIC5.12□□□□□ -1.59
CHAMP1Q96JM3 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CHAMP1Q96JM3 PANCR-202ENST00000513690 448 ntTSL 2 BASIC5.12□□□□□ -1.59
CHAMP1Q96JM3 RNU6-1220P-201ENST00000517126 108 ntBASIC5.12□□□□□ -1.59
CHAMP1Q96JM3 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC5.12□□□□□ -1.59
CHAMP1Q96JM3 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.12□□□□□ -1.59
CHAMP1Q96JM3 AL356432.3-201ENST00000568952 465 ntBASIC5.12□□□□□ -1.59
CHAMP1Q96JM3 UBE2L4-201ENST00000587688 464 ntBASIC5.12□□□□□ -1.59
CHAMP1Q96JM3 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.12□□□□□ -1.59
CHAMP1Q96JM3 AC025449.1-201ENST00000603896 529 ntBASIC5.12□□□□□ -1.59
CHAMP1Q96JM3 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC5.12□□□□□ -1.59
CHAMP1Q96JM3 BNIP3P10-201ENST00000605360 577 ntBASIC5.12□□□□□ -1.59
CHAMP1Q96JM3 AL031666.3-201ENST00000609320 1006 ntBASIC5.12□□□□□ -1.59
CHAMP1Q96JM3 YWHAEP7-203ENST00000622054 312 ntBASIC5.12□□□□□ -1.59
CHAMP1Q96JM3 AL158801.5-201ENST00000623123 465 ntBASIC5.12□□□□□ -1.59
CHAMP1Q96JM3 AC009161.2-201ENST00000624626 138 ntBASIC5.12□□□□□ -1.59
CHAMP1Q96JM3 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.12□□□□□ -1.59
CHAMP1Q96JM3 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.12□□□□□ -1.59
CHAMP1Q96JM3 AC093775.1-201ENST00000624154 1868 ntBASIC5.11□□□□□ -1.59
CHAMP1Q96JM3 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
CHAMP1Q96JM3 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CHAMP1Q96JM3 RNU1-15P-201ENST00000353977 144 ntBASIC5.11□□□□□ -1.59
CHAMP1Q96JM3 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CHAMP1Q96JM3 XGY1-201ENST00000381172 446 ntBASIC5.11□□□□□ -1.59
CHAMP1Q96JM3 AC097374.1-203ENST00000400783 485 ntBASIC5.11□□□□□ -1.59
CHAMP1Q96JM3 AL356421.1-201ENST00000403255 413 ntBASIC5.11□□□□□ -1.59
CHAMP1Q96JM3 RN7SKP267-201ENST00000410381 285 ntBASIC5.11□□□□□ -1.59
CHAMP1Q96JM3 AC069218.2-201ENST00000411665 344 ntBASIC5.11□□□□□ -1.59
CHAMP1Q96JM3 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC5.11□□□□□ -1.59
CHAMP1Q96JM3 RPL6P29-201ENST00000414863 865 ntBASIC5.11□□□□□ -1.59
CHAMP1Q96JM3 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC5.11□□□□□ -1.59
CHAMP1Q96JM3 COX6CP15-201ENST00000426313 211 ntBASIC5.11□□□□□ -1.59
CHAMP1Q96JM3 FTLP19-201ENST00000433300 394 ntBASIC5.11□□□□□ -1.59
CHAMP1Q96JM3 CEACAMP1-201ENST00000434624 1035 ntBASIC5.11□□□□□ -1.59
CHAMP1Q96JM3 USP9YP15-201ENST00000442391 422 ntBASIC5.11□□□□□ -1.59
CHAMP1Q96JM3 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.11□□□□□ -1.59
CHAMP1Q96JM3 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.11□□□□□ -1.59
CHAMP1Q96JM3 AL359073.1-201ENST00000448036 403 ntBASIC5.11□□□□□ -1.59
CHAMP1Q96JM3 SNRPGP6-201ENST00000451124 220 ntBASIC5.11□□□□□ -1.59
CHAMP1Q96JM3 AC012671.1-201ENST00000451912 203 ntBASIC5.11□□□□□ -1.59
CHAMP1Q96JM3 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC5.11□□□□□ -1.59
CHAMP1Q96JM3 NPM1P41-201ENST00000512920 831 ntBASIC5.11□□□□□ -1.59
CHAMP1Q96JM3 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC5.11□□□□□ -1.59
CHAMP1Q96JM3 AC090572.1-201ENST00000519251 160 ntBASIC5.11□□□□□ -1.59
CHAMP1Q96JM3 AC022616.3-201ENST00000523940 148 ntBASIC5.11□□□□□ -1.59
CHAMP1Q96JM3 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.11□□□□□ -1.59
CHAMP1Q96JM3 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CHAMP1Q96JM3 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC5.11□□□□□ -1.59
CHAMP1Q96JM3 MIR3667-201ENST00000581025 74 ntBASIC5.11□□□□□ -1.59
CHAMP1Q96JM3 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.11□□□□□ -1.59
CHAMP1Q96JM3 AC110743.1-201ENST00000584870 478 ntBASIC5.11□□□□□ -1.59
CHAMP1Q96JM3 AC093227.2-201ENST00000589357 285 ntBASIC5.11□□□□□ -1.59
CHAMP1Q96JM3 AC044792.1-201ENST00000593294 196 ntBASIC5.11□□□□□ -1.59
CHAMP1Q96JM3 AC121334.2-201ENST00000605387 271 ntBASIC5.11□□□□□ -1.59
CHAMP1Q96JM3 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.11□□□□□ -1.59
CHAMP1Q96JM3 AC009233.1-201ENST00000616477 371 ntBASIC5.11□□□□□ -1.59
CHAMP1Q96JM3 MIR6864-201ENST00000617935 70 ntBASIC5.11□□□□□ -1.59
CHAMP1Q96JM3 AC009318.4-201ENST00000620496 486 ntBASIC5.11□□□□□ -1.59
CHAMP1Q96JM3 AL136221.1-201ENST00000621449 509 ntBASIC5.11□□□□□ -1.59
CHAMP1Q96JM3 OR14L1P-202ENST00000641545 3009 ntBASIC5.11□□□□□ -1.59
CHAMP1Q96JM3 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CHAMP1Q96JM3 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CHAMP1Q96JM3 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
CHAMP1Q96JM3 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
CHAMP1Q96JM3 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CHAMP1Q96JM3 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CHAMP1Q96JM3 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.1□□□□□ -1.59
CHAMP1Q96JM3 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CHAMP1Q96JM3 AC139713.2-215ENST00000641428 5037 ntBASIC5.1□□□□□ -1.59
CHAMP1Q96JM3 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CHAMP1Q96JM3 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CHAMP1Q96JM3 RNA5SP307-201ENST00000362863 116 ntBASIC5.1□□□□□ -1.59
CHAMP1Q96JM3 Y_RNA.86-201ENST00000363020 111 ntBASIC5.1□□□□□ -1.59
CHAMP1Q96JM3 RNU1-130P-201ENST00000363930 160 ntBASIC5.1□□□□□ -1.59
CHAMP1Q96JM3 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.1□□□□□ -1.59
CHAMP1Q96JM3 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CHAMP1Q96JM3 SNORA20.2-201ENST00000383922 131 ntBASIC5.1□□□□□ -1.59
CHAMP1Q96JM3 RNU6-1158P-201ENST00000391167 107 ntBASIC5.1□□□□□ -1.59
CHAMP1Q96JM3 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
CHAMP1Q96JM3 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
CHAMP1Q96JM3 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC5.1□□□□□ -1.59
CHAMP1Q96JM3 CHIAP3-201ENST00000423668 1133 ntBASIC5.1□□□□□ -1.59
CHAMP1Q96JM3 AC007283.2-201ENST00000424739 197 ntBASIC5.1□□□□□ -1.59
CHAMP1Q96JM3 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.1□□□□□ -1.59
CHAMP1Q96JM3 AC016831.4-201ENST00000438302 307 ntBASIC5.1□□□□□ -1.59
CHAMP1Q96JM3 SAGE4P-201ENST00000442271 3381 ntBASIC5.1□□□□□ -1.59
CHAMP1Q96JM3 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.1□□□□□ -1.59
CHAMP1Q96JM3 ELL2P4-201ENST00000446870 1376 ntBASIC5.1□□□□□ -1.59
CHAMP1Q96JM3 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC5.1□□□□□ -1.59
CHAMP1Q96JM3 RPS20P20-201ENST00000460498 340 ntBASIC5.1□□□□□ -1.59
CHAMP1Q96JM3 AP001992.1-205ENST00000462248 379 ntBASIC5.1□□□□□ -1.59
CHAMP1Q96JM3 PLGLA-201ENST00000465668 449 ntBASIC5.1□□□□□ -1.59
CHAMP1Q96JM3 RPS26P28-201ENST00000470806 348 ntBASIC5.1□□□□□ -1.59
CHAMP1Q96JM3 AK3P4-201ENST00000504283 583 ntBASIC5.1□□□□□ -1.59
CHAMP1Q96JM3 AC093767.1-201ENST00000504523 156 ntBASIC5.1□□□□□ -1.59
CHAMP1Q96JM3 AC093840.1-201ENST00000511599 336 ntBASIC5.1□□□□□ -1.59
CHAMP1Q96JM3 AC093853.1-201ENST00000515689 483 ntBASIC5.1□□□□□ -1.59
CHAMP1Q96JM3 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms