Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VPS50Q96JG6 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
VPS50Q96JG6 RNU6-1207P-201ENST00000384343 107 ntBASIC4.19□□□□□ -1.74
VPS50Q96JG6 RNU1-89P-201ENST00000384592 164 ntBASIC4.19□□□□□ -1.74
VPS50Q96JG6 CCNG1P1-201ENST00000406783 885 ntBASIC4.19□□□□□ -1.74
VPS50Q96JG6 RNU2-15P-201ENST00000410692 191 ntBASIC4.19□□□□□ -1.74
VPS50Q96JG6 SPA17P1-201ENST00000416656 452 ntBASIC4.19□□□□□ -1.74
VPS50Q96JG6 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.19□□□□□ -1.74
VPS50Q96JG6 AC009961.2-201ENST00000435771 251 ntBASIC4.19□□□□□ -1.74
VPS50Q96JG6 MTATP6P13-201ENST00000438531 667 ntBASIC4.19□□□□□ -1.74
VPS50Q96JG6 CBX1P1-201ENST00000440184 427 ntBASIC4.19□□□□□ -1.74
VPS50Q96JG6 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.19□□□□□ -1.74
VPS50Q96JG6 MTND1P1-201ENST00000445453 368 ntBASIC4.19□□□□□ -1.74
VPS50Q96JG6 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.19□□□□□ -1.74
VPS50Q96JG6 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.19□□□□□ -1.74
VPS50Q96JG6 RPL7P52-201ENST00000449200 742 ntBASIC4.19□□□□□ -1.74
VPS50Q96JG6 FABP3P2-201ENST00000453169 399 ntBASIC4.19□□□□□ -1.74
VPS50Q96JG6 AC098824.1-201ENST00000453565 980 ntBASIC4.19□□□□□ -1.74
VPS50Q96JG6 RPS20P32-201ENST00000456044 356 ntBASIC4.19□□□□□ -1.74
VPS50Q96JG6 AC053481.1-201ENST00000467217 306 ntBASIC4.19□□□□□ -1.74
VPS50Q96JG6 RPL7P24-201ENST00000493052 752 ntBASIC4.19□□□□□ -1.74
VPS50Q96JG6 AC034222.1-201ENST00000494052 532 ntBASIC4.19□□□□□ -1.74
VPS50Q96JG6 TXNP6-201ENST00000510190 310 ntBASIC4.19□□□□□ -1.74
VPS50Q96JG6 AC091133.4-201ENST00000511142 308 ntBASIC4.19□□□□□ -1.74
VPS50Q96JG6 PTGES3P3-201ENST00000511479 482 ntBASIC4.19□□□□□ -1.74
VPS50Q96JG6 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.19□□□□□ -1.74
VPS50Q96JG6 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.19□□□□□ -1.74
VPS50Q96JG6 RNU6-506P-201ENST00000516553 94 ntBASIC4.19□□□□□ -1.74
VPS50Q96JG6 IGKV2D-23-201ENST00000518179 286 ntBASIC4.19□□□□□ -1.74
VPS50Q96JG6 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.19□□□□□ -1.74
VPS50Q96JG6 MED28P5-201ENST00000528254 438 ntBASIC4.19□□□□□ -1.74
VPS50Q96JG6 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.19□□□□□ -1.74
VPS50Q96JG6 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.19□□□□□ -1.74
VPS50Q96JG6 AC123904.2-201ENST00000548059 300 ntBASIC4.19□□□□□ -1.74
VPS50Q96JG6 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.19□□□□□ -1.74
VPS50Q96JG6 AC034268.2-201ENST00000571784 482 ntBASIC4.19□□□□□ -1.74
VPS50Q96JG6 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.19□□□□□ -1.74
VPS50Q96JG6 AL365503.1-201ENST00000605247 905 ntBASIC4.19□□□□□ -1.74
VPS50Q96JG6 AC109347.2-201ENST00000610220 349 ntBASIC4.19□□□□□ -1.74
VPS50Q96JG6 AC091304.9-201ENST00000612091 226 ntBASIC4.19□□□□□ -1.74
VPS50Q96JG6 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.19□□□□□ -1.74
VPS50Q96JG6 AL139089.1-201ENST00000620372 975 ntBASIC4.19□□□□□ -1.74
VPS50Q96JG6 AC092125.1-201ENST00000562568 1995 ntBASIC4.19□□□□□ -1.74
VPS50Q96JG6 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.19□□□□□ -1.74
VPS50Q96JG6 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.19□□□□□ -1.74
VPS50Q96JG6 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
VPS50Q96JG6 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
VPS50Q96JG6 AC092447.10-201ENST00000620607 1652 ntBASIC4.19□□□□□ -1.74
VPS50Q96JG6 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
VPS50Q96JG6 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.19□□□□□ -1.74
VPS50Q96JG6 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VPS50Q96JG6 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.18□□□□□ -1.74
VPS50Q96JG6 RNA5SP307-201ENST00000362863 116 ntBASIC4.18□□□□□ -1.74
VPS50Q96JG6 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
VPS50Q96JG6 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
VPS50Q96JG6 MIR3065-201ENST00000390137 79 ntBASIC4.18□□□□□ -1.74
VPS50Q96JG6 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS50Q96JG6 USP9YP36-201ENST00000424581 829 ntBASIC4.18□□□□□ -1.74
VPS50Q96JG6 ISCA1P6-201ENST00000427740 390 ntBASIC4.18□□□□□ -1.74
VPS50Q96JG6 AL358934.1-201ENST00000432346 324 ntBASIC4.18□□□□□ -1.74
VPS50Q96JG6 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.18□□□□□ -1.74
VPS50Q96JG6 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS50Q96JG6 AC073614.1-201ENST00000438690 650 ntBASIC4.18□□□□□ -1.74
VPS50Q96JG6 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS50Q96JG6 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS50Q96JG6 RPL29P29-201ENST00000448725 423 ntBASIC4.18□□□□□ -1.74
VPS50Q96JG6 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS50Q96JG6 AC099563.1-201ENST00000456086 418 ntBASIC4.18□□□□□ -1.74
VPS50Q96JG6 RPS4XP10-201ENST00000465034 731 ntBASIC4.18□□□□□ -1.74
VPS50Q96JG6 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VPS50Q96JG6 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.18□□□□□ -1.74
VPS50Q96JG6 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS50Q96JG6 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VPS50Q96JG6 RNA5SP309-201ENST00000516670 106 ntBASIC4.18□□□□□ -1.74
VPS50Q96JG6 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.18□□□□□ -1.74
VPS50Q96JG6 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS50Q96JG6 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
VPS50Q96JG6 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS50Q96JG6 AC136619.2-201ENST00000563361 631 ntBASIC4.18□□□□□ -1.74
VPS50Q96JG6 TPRKBP2-201ENST00000565969 475 ntBASIC4.18□□□□□ -1.74
VPS50Q96JG6 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.18□□□□□ -1.74
VPS50Q96JG6 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VPS50Q96JG6 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.18□□□□□ -1.74
VPS50Q96JG6 AL596245.1-201ENST00000618994 362 ntBASIC4.18□□□□□ -1.74
VPS50Q96JG6 AC068880.5-201ENST00000624331 290 ntBASIC4.18□□□□□ -1.74
VPS50Q96JG6 MIR4496-201ENST00000635896 61 ntBASIC4.18□□□□□ -1.74
VPS50Q96JG6 AC138649.5-201ENST00000637456 137 ntBASIC4.18□□□□□ -1.74
VPS50Q96JG6 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VPS50Q96JG6 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VPS50Q96JG6 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.18□□□□□ -1.74
VPS50Q96JG6 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
VPS50Q96JG6 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
VPS50Q96JG6 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.17□□□□□ -1.74
VPS50Q96JG6 ZNF734P-201ENST00000419494 1534 ntBASIC4.17□□□□□ -1.74
VPS50Q96JG6 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.17□□□□□ -1.74
VPS50Q96JG6 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
VPS50Q96JG6 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.17□□□□□ -1.74
VPS50Q96JG6 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
VPS50Q96JG6 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
VPS50Q96JG6 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 147.8 ms