Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 RNU6-826P-201ENST00000516827 104 ntBASIC2.52□□□□□ -2.01
SHROOM3Q8TF72 RNU6-334P-201ENST00000517072 102 ntBASIC2.52□□□□□ -2.01
SHROOM3Q8TF72 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.52□□□□□ -2.01
SHROOM3Q8TF72 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.52□□□□□ -2.01
SHROOM3Q8TF72 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SHROOM3Q8TF72 AC078814.3-201ENST00000553036 491 ntBASIC2.52□□□□□ -2.01
SHROOM3Q8TF72 AP001004.1-201ENST00000582468 324 ntBASIC2.52□□□□□ -2.01
SHROOM3Q8TF72 AC068313.1-201ENST00000604028 1008 ntBASIC2.52□□□□□ -2.01
SHROOM3Q8TF72 AC103810.6-201ENST00000606708 136 ntBASIC2.52□□□□□ -2.01
SHROOM3Q8TF72 U4.3-201ENST00000621047 82 ntBASIC2.52□□□□□ -2.01
SHROOM3Q8TF72 AL138960.2-201ENST00000625145 535 ntBASIC2.52□□□□□ -2.01
SHROOM3Q8TF72 AC006378.2-201ENST00000623178 2476 ntBASIC2.52□□□□□ -2.01
SHROOM3Q8TF72 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SHROOM3Q8TF72 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SHROOM3Q8TF72 AC092447.7-201ENST00000422212 1621 ntBASIC2.51□□□□□ -2.01
SHROOM3Q8TF72 MIR6073-201ENST00000352083 89 ntBASIC2.51□□□□□ -2.01
SHROOM3Q8TF72 HMGB1P10-201ENST00000395823 563 ntBASIC2.51□□□□□ -2.01
SHROOM3Q8TF72 AL355143.1-201ENST00000407101 841 ntBASIC2.51□□□□□ -2.01
SHROOM3Q8TF72 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.51□□□□□ -2.01
SHROOM3Q8TF72 RPL7P53-201ENST00000421245 739 ntBASIC2.51□□□□□ -2.01
SHROOM3Q8TF72 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC2.51□□□□□ -2.01
SHROOM3Q8TF72 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.51□□□□□ -2.01
SHROOM3Q8TF72 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC2.51□□□□□ -2.01
SHROOM3Q8TF72 RPL34P26-201ENST00000445636 354 ntBASIC2.51□□□□□ -2.01
SHROOM3Q8TF72 RPL7P55-201ENST00000450522 746 ntBASIC2.51□□□□□ -2.01
SHROOM3Q8TF72 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.51□□□□□ -2.01
SHROOM3Q8TF72 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC2.51□□□□□ -2.01
SHROOM3Q8TF72 AC108471.1-201ENST00000513977 287 ntBASIC2.51□□□□□ -2.01
SHROOM3Q8TF72 RNU6-1102P-201ENST00000516149 96 ntBASIC2.51□□□□□ -2.01
SHROOM3Q8TF72 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC2.51□□□□□ -2.01
SHROOM3Q8TF72 C1DP5-201ENST00000525775 383 ntBASIC2.51□□□□□ -2.01
SHROOM3Q8TF72 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC2.51□□□□□ -2.01
SHROOM3Q8TF72 AL049870.4-201ENST00000555741 486 ntBASIC2.51□□□□□ -2.01
SHROOM3Q8TF72 AC007621.1-201ENST00000604544 437 ntBASIC2.51□□□□□ -2.01
SHROOM3Q8TF72 BX664608.1-201ENST00000610519 487 ntBASIC2.51□□□□□ -2.01
SHROOM3Q8TF72 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC2.51□□□□□ -2.01
SHROOM3Q8TF72 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.51□□□□□ -2.01
SHROOM3Q8TF72 U6.98-201ENST00000637157 84 ntBASIC2.51□□□□□ -2.01
SHROOM3Q8TF72 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.51□□□□□ -2.01
SHROOM3Q8TF72 AC002543.1-201ENST00000299783 1954 ntBASIC2.51□□□□□ -2.01
SHROOM3Q8TF72 AP006437.1-201ENST00000641440 3685 ntBASIC2.51□□□□□ -2.01
SHROOM3Q8TF72 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SHROOM3Q8TF72 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SHROOM3Q8TF72 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
SHROOM3Q8TF72 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SHROOM3Q8TF72 AC013404.1-201ENST00000413068 249 ntBASIC2.5□□□□□ -2.01
SHROOM3Q8TF72 AC023128.2-201ENST00000420880 1223 ntBASIC2.5□□□□□ -2.01
SHROOM3Q8TF72 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.5□□□□□ -2.01
SHROOM3Q8TF72 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.5□□□□□ -2.01
SHROOM3Q8TF72 AL590103.1-201ENST00000434488 307 ntBASIC2.5□□□□□ -2.01
SHROOM3Q8TF72 ELOCP10-201ENST00000440624 327 ntBASIC2.5□□□□□ -2.01
SHROOM3Q8TF72 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC2.5□□□□□ -2.01
SHROOM3Q8TF72 RPS27P5-201ENST00000444247 244 ntBASIC2.5□□□□□ -2.01
SHROOM3Q8TF72 AC104389.3-201ENST00000445629 235 ntBASIC2.5□□□□□ -2.01
SHROOM3Q8TF72 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC2.5□□□□□ -2.01
SHROOM3Q8TF72 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC2.5□□□□□ -2.01
SHROOM3Q8TF72 AC022431.1-201ENST00000450941 438 ntBASIC2.5□□□□□ -2.01
SHROOM3Q8TF72 SNORA31.1-201ENST00000515993 133 ntBASIC2.5□□□□□ -2.01
SHROOM3Q8TF72 SNORA31.5-201ENST00000516190 133 ntBASIC2.5□□□□□ -2.01
SHROOM3Q8TF72 AP001646.1-201ENST00000527936 915 ntBASIC2.5□□□□□ -2.01
SHROOM3Q8TF72 OR4A45P-201ENST00000529954 901 ntBASIC2.5□□□□□ -2.01
SHROOM3Q8TF72 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.5□□□□□ -2.01
SHROOM3Q8TF72 AC027104.1-201ENST00000563702 681 ntBASIC2.5□□□□□ -2.01
SHROOM3Q8TF72 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.5□□□□□ -2.01
SHROOM3Q8TF72 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.5□□□□□ -2.01
SHROOM3Q8TF72 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC2.5□□□□□ -2.01
SHROOM3Q8TF72 ELOCP34-201ENST00000604436 327 ntBASIC2.5□□□□□ -2.01
SHROOM3Q8TF72 AL137847.3-201ENST00000611521 109 ntBASIC2.5□□□□□ -2.01
SHROOM3Q8TF72 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
SHROOM3Q8TF72 RMST_10.1-201ENST00000616309 154 ntBASIC2.5□□□□□ -2.01
SHROOM3Q8TF72 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SHROOM3Q8TF72 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
SHROOM3Q8TF72 Xist_exon1.1-201ENST00000618930 85 ntBASIC2.5□□□□□ -2.01
SHROOM3Q8TF72 AC006249.1-201ENST00000621223 471 ntBASIC2.5□□□□□ -2.01
SHROOM3Q8TF72 AC048347.1-201ENST00000624621 427 ntBASIC2.5□□□□□ -2.01
SHROOM3Q8TF72 AL353746.1-201ENST00000566293 6881 ntBASIC2.5□□□□□ -2.01
SHROOM3Q8TF72 MIR1287-201ENST00000408492 90 ntBASIC2.5□□□□□ -2.01
SHROOM3Q8TF72 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC2.5□□□□□ -2.01
SHROOM3Q8TF72 RPL31P45-201ENST00000419532 356 ntBASIC2.5□□□□□ -2.01
SHROOM3Q8TF72 AC048351.1-201ENST00000420064 602 ntBASIC2.5□□□□□ -2.01
SHROOM3Q8TF72 AL512637.2-201ENST00000431287 1256 ntBASIC2.5□□□□□ -2.01
SHROOM3Q8TF72 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.5□□□□□ -2.01
SHROOM3Q8TF72 CLIC4P1-201ENST00000453177 535 ntBASIC2.5□□□□□ -2.01
SHROOM3Q8TF72 GTF2IP12-201ENST00000456547 356 ntBASIC2.5□□□□□ -2.01
SHROOM3Q8TF72 OR5H5P-201ENST00000503164 928 ntBASIC2.5□□□□□ -2.01
SHROOM3Q8TF72 AC026436.1-201ENST00000510537 270 ntBASIC2.5□□□□□ -2.01
SHROOM3Q8TF72 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
SHROOM3Q8TF72 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC2.5□□□□□ -2.01
SHROOM3Q8TF72 OR4U1P-201ENST00000554958 912 ntBASIC2.5□□□□□ -2.01
SHROOM3Q8TF72 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.5□□□□□ -2.01
SHROOM3Q8TF72 MTND4LP25-201ENST00000570218 163 ntBASIC2.5□□□□□ -2.01
SHROOM3Q8TF72 MIR4789-201ENST00000577469 82 ntBASIC2.5□□□□□ -2.01
SHROOM3Q8TF72 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
SHROOM3Q8TF72 AC116563.2-201ENST00000624751 535 ntBASIC2.5□□□□□ -2.01
SHROOM3Q8TF72 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
SHROOM3Q8TF72 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.49□□□□□ -2.01
SHROOM3Q8TF72 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SHROOM3Q8TF72 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC2.49□□□□□ -2.01
SHROOM3Q8TF72 AL158825.1-201ENST00000414735 521 ntBASIC2.49□□□□□ -2.01
SHROOM3Q8TF72 MTND4P11-201ENST00000417020 1058 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms