Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 MIR1284-201ENST00000408337 120 ntBASIC4.92□□□□□ -1.62
SH3RF3Q8TEJ3 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.92□□□□□ -1.62
SH3RF3Q8TEJ3 MTND3P17-201ENST00000416968 344 ntBASIC4.92□□□□□ -1.62
SH3RF3Q8TEJ3 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.92□□□□□ -1.62
SH3RF3Q8TEJ3 SDCBPP2-201ENST00000424643 885 ntBASIC4.92□□□□□ -1.62
SH3RF3Q8TEJ3 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.92□□□□□ -1.62
SH3RF3Q8TEJ3 TBCAP1-201ENST00000436520 327 ntBASIC4.92□□□□□ -1.62
SH3RF3Q8TEJ3 ARPC3P5-201ENST00000448802 534 ntBASIC4.92□□□□□ -1.62
SH3RF3Q8TEJ3 AC140076.1-201ENST00000449897 361 ntBASIC4.92□□□□□ -1.62
SH3RF3Q8TEJ3 FABP3P2-201ENST00000453169 399 ntBASIC4.92□□□□□ -1.62
SH3RF3Q8TEJ3 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.92□□□□□ -1.62
SH3RF3Q8TEJ3 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.92□□□□□ -1.62
SH3RF3Q8TEJ3 AC079804.1-201ENST00000461922 436 ntBASIC4.92□□□□□ -1.62
SH3RF3Q8TEJ3 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SH3RF3Q8TEJ3 AC114981.1-201ENST00000503897 678 ntBASIC4.92□□□□□ -1.62
SH3RF3Q8TEJ3 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.92□□□□□ -1.62
SH3RF3Q8TEJ3 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.92□□□□□ -1.62
SH3RF3Q8TEJ3 RNY4P37-201ENST00000516225 96 ntBASIC4.92□□□□□ -1.62
SH3RF3Q8TEJ3 RNU6-416P-201ENST00000516265 103 ntBASIC4.92□□□□□ -1.62
SH3RF3Q8TEJ3 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.92□□□□□ -1.62
SH3RF3Q8TEJ3 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.92□□□□□ -1.62
SH3RF3Q8TEJ3 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.92□□□□□ -1.62
SH3RF3Q8TEJ3 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.92□□□□□ -1.62
SH3RF3Q8TEJ3 HIF1AP1-201ENST00000553642 175 ntBASIC4.92□□□□□ -1.62
SH3RF3Q8TEJ3 AC068446.3-201ENST00000555285 382 ntBASIC4.92□□□□□ -1.62
SH3RF3Q8TEJ3 GTF2IP8-201ENST00000560687 584 ntBASIC4.92□□□□□ -1.62
SH3RF3Q8TEJ3 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.92□□□□□ -1.62
SH3RF3Q8TEJ3 AC110743.1-201ENST00000584870 478 ntBASIC4.92□□□□□ -1.62
SH3RF3Q8TEJ3 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.92□□□□□ -1.62
SH3RF3Q8TEJ3 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.92□□□□□ -1.62
SH3RF3Q8TEJ3 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC4.92□□□□□ -1.62
SH3RF3Q8TEJ3 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.92□□□□□ -1.62
SH3RF3Q8TEJ3 CDRT1-208ENST00000630868 794 ntBASIC4.92□□□□□ -1.62
SH3RF3Q8TEJ3 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
SH3RF3Q8TEJ3 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
SH3RF3Q8TEJ3 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
SH3RF3Q8TEJ3 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SH3RF3Q8TEJ3 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SH3RF3Q8TEJ3 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
SH3RF3Q8TEJ3 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.92□□□□□ -1.62
SH3RF3Q8TEJ3 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SH3RF3Q8TEJ3 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.91□□□□□ -1.62
SH3RF3Q8TEJ3 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SH3RF3Q8TEJ3 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
SH3RF3Q8TEJ3 CYP1D1P-201ENST00000416662 1433 ntBASIC4.91□□□□□ -1.62
SH3RF3Q8TEJ3 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.91□□□□□ -1.62
SH3RF3Q8TEJ3 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SH3RF3Q8TEJ3 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
SH3RF3Q8TEJ3 Y_RNA.1-201ENST00000352915 104 ntBASIC4.91□□□□□ -1.62
SH3RF3Q8TEJ3 RNU6-1085P-201ENST00000363576 107 ntBASIC4.91□□□□□ -1.62
SH3RF3Q8TEJ3 RNU6-1160P-201ENST00000384546 104 ntBASIC4.91□□□□□ -1.62
SH3RF3Q8TEJ3 RPL31P52-201ENST00000407532 367 ntBASIC4.91□□□□□ -1.62
SH3RF3Q8TEJ3 RN7SKP247-201ENST00000411094 308 ntBASIC4.91□□□□□ -1.62
SH3RF3Q8TEJ3 AC109780.2-201ENST00000413467 845 ntBASIC4.91□□□□□ -1.62
SH3RF3Q8TEJ3 NCOR1P3-201ENST00000420479 303 ntBASIC4.91□□□□□ -1.62
SH3RF3Q8TEJ3 USP9YP36-201ENST00000424581 829 ntBASIC4.91□□□□□ -1.62
SH3RF3Q8TEJ3 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SH3RF3Q8TEJ3 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.91□□□□□ -1.62
SH3RF3Q8TEJ3 CALM1P1-201ENST00000442082 433 ntBASIC4.91□□□□□ -1.62
SH3RF3Q8TEJ3 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.91□□□□□ -1.62
SH3RF3Q8TEJ3 RPS20P20-201ENST00000460498 340 ntBASIC4.91□□□□□ -1.62
SH3RF3Q8TEJ3 AC006511.1-201ENST00000470614 315 ntBASIC4.91□□□□□ -1.62
SH3RF3Q8TEJ3 AC010683.1-201ENST00000473673 378 ntBASIC4.91□□□□□ -1.62
SH3RF3Q8TEJ3 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC4.91□□□□□ -1.62
SH3RF3Q8TEJ3 AC139783.2-201ENST00000504847 1145 ntBASIC4.91□□□□□ -1.62
SH3RF3Q8TEJ3 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.91□□□□□ -1.62
SH3RF3Q8TEJ3 AC104108.1-201ENST00000509930 412 ntBASIC4.91□□□□□ -1.62
SH3RF3Q8TEJ3 RPL7L1P13-201ENST00000511702 739 ntBASIC4.91□□□□□ -1.62
SH3RF3Q8TEJ3 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.91□□□□□ -1.62
SH3RF3Q8TEJ3 AC009977.1-201ENST00000586015 570 ntBASIC4.91□□□□□ -1.62
SH3RF3Q8TEJ3 AC011712.1-201ENST00000588959 234 ntBASIC4.91□□□□□ -1.62
SH3RF3Q8TEJ3 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.91□□□□□ -1.62
SH3RF3Q8TEJ3 NRBF2P5-201ENST00000603087 788 ntBASIC4.91□□□□□ -1.62
SH3RF3Q8TEJ3 AL391646.1-201ENST00000603860 190 ntBASIC4.91□□□□□ -1.62
SH3RF3Q8TEJ3 AL136363.1-201ENST00000605349 337 ntBASIC4.91□□□□□ -1.62
SH3RF3Q8TEJ3 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.91□□□□□ -1.62
SH3RF3Q8TEJ3 RMST_3.1-201ENST00000611651 109 ntBASIC4.91□□□□□ -1.62
SH3RF3Q8TEJ3 AC024940.5-201ENST00000622889 474 ntBASIC4.91□□□□□ -1.62
SH3RF3Q8TEJ3 ASNSP1-204ENST00000641977 1664 ntBASIC4.91□□□□□ -1.62
SH3RF3Q8TEJ3 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SH3RF3Q8TEJ3 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.91□□□□□ -1.62
SH3RF3Q8TEJ3 GDI2P1-201ENST00000429312 1336 ntBASIC4.91□□□□□ -1.62
SH3RF3Q8TEJ3 DCAF13P1-201ENST00000495256 1330 ntBASIC4.91□□□□□ -1.62
SH3RF3Q8TEJ3 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.91□□□□□ -1.62
SH3RF3Q8TEJ3 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SH3RF3Q8TEJ3 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SH3RF3Q8TEJ3 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
SH3RF3Q8TEJ3 AL031985.3-201ENST00000565390 2449 ntBASIC4.91□□□□□ -1.62
SH3RF3Q8TEJ3 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SH3RF3Q8TEJ3 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
SH3RF3Q8TEJ3 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.62
SH3RF3Q8TEJ3 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
SH3RF3Q8TEJ3 AC022893.2-201ENST00000564832 3296 ntBASIC4.9□□□□□ -1.62
SH3RF3Q8TEJ3 HMGB1P5-201ENST00000255320 642 ntBASIC4.9□□□□□ -1.63
SH3RF3Q8TEJ3 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SH3RF3Q8TEJ3 Y_RNA.146-201ENST00000363549 102 ntBASIC4.9□□□□□ -1.63
SH3RF3Q8TEJ3 AC019155.1-201ENST00000382242 574 ntBASIC4.9□□□□□ -1.63
SH3RF3Q8TEJ3 Y_RNA.431-201ENST00000384086 102 ntBASIC4.9□□□□□ -1.63
SH3RF3Q8TEJ3 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
SH3RF3Q8TEJ3 RPL23AP29-201ENST00000397284 453 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms