Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC148Q8NFR7 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC148Q8NFR7 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC148Q8NFR7 SNORA1.3-201ENST00000384676 136 ntBASIC3.22□□□□□ -1.89
CCDC148Q8NFR7 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC148Q8NFR7 OR51A3P-201ENST00000413596 924 ntBASIC3.22□□□□□ -1.89
CCDC148Q8NFR7 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.22□□□□□ -1.89
CCDC148Q8NFR7 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.22□□□□□ -1.89
CCDC148Q8NFR7 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.22□□□□□ -1.89
CCDC148Q8NFR7 AC093156.1-201ENST00000440382 670 ntBASIC3.22□□□□□ -1.89
CCDC148Q8NFR7 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.22□□□□□ -1.89
CCDC148Q8NFR7 AC002542.1-201ENST00000440683 193 ntBASIC3.22□□□□□ -1.89
CCDC148Q8NFR7 RPS24P13-201ENST00000442520 397 ntBASIC3.22□□□□□ -1.89
CCDC148Q8NFR7 AC003982.1-202ENST00000469928 248 ntBASIC3.22□□□□□ -1.89
CCDC148Q8NFR7 RPL21P47-201ENST00000483696 477 ntBASIC3.22□□□□□ -1.89
CCDC148Q8NFR7 AC096751.1-202ENST00000502691 1067 ntBASIC3.22□□□□□ -1.89
CCDC148Q8NFR7 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC148Q8NFR7 MTND3P24-201ENST00000506306 329 ntBASIC3.22□□□□□ -1.89
CCDC148Q8NFR7 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC148Q8NFR7 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC148Q8NFR7 RNU6-416P-201ENST00000516265 103 ntBASIC3.22□□□□□ -1.89
CCDC148Q8NFR7 RNA5SP76-201ENST00000516277 87 ntBASIC3.22□□□□□ -1.89
CCDC148Q8NFR7 SNORA9.3-201ENST00000516383 129 ntBASIC3.22□□□□□ -1.89
CCDC148Q8NFR7 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC148Q8NFR7 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.22□□□□□ -1.89
CCDC148Q8NFR7 OR10V3P-201ENST00000525712 725 ntBASIC3.22□□□□□ -1.89
CCDC148Q8NFR7 AC018630.1-201ENST00000541376 925 ntBASIC3.22□□□□□ -1.89
CCDC148Q8NFR7 LSM6P2-201ENST00000552208 177 ntBASIC3.22□□□□□ -1.89
CCDC148Q8NFR7 BPTFP1-201ENST00000579209 492 ntBASIC3.22□□□□□ -1.89
CCDC148Q8NFR7 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC148Q8NFR7 AC107871.2-201ENST00000612894 502 ntBASIC3.22□□□□□ -1.89
CCDC148Q8NFR7 AC007275.1-201ENST00000621243 671 ntBASIC3.22□□□□□ -1.89
CCDC148Q8NFR7 AC098679.5-201ENST00000624394 571 ntBASIC3.22□□□□□ -1.89
CCDC148Q8NFR7 MIR6733-201ENST00000635723 61 ntBASIC3.22□□□□□ -1.89
CCDC148Q8NFR7 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC148Q8NFR7 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC148Q8NFR7 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.22□□□□□ -1.89
CCDC148Q8NFR7 AC130650.2-201ENST00000618736 2403 ntBASIC3.22□□□□□ -1.89
CCDC148Q8NFR7 AC011460.1-201ENST00000636268 1834 ntBASIC3.21□□□□□ -1.89
CCDC148Q8NFR7 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.21□□□□□ -1.89
CCDC148Q8NFR7 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC148Q8NFR7 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
CCDC148Q8NFR7 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC148Q8NFR7 SNORA18.3-201ENST00000384122 132 ntBASIC3.21□□□□□ -1.9
CCDC148Q8NFR7 MIR181A2-201ENST00000384863 110 ntBASIC3.21□□□□□ -1.9
CCDC148Q8NFR7 MIR887-201ENST00000401258 79 ntBASIC3.21□□□□□ -1.9
CCDC148Q8NFR7 AC099677.1-201ENST00000420575 175 ntBASIC3.21□□□□□ -1.9
CCDC148Q8NFR7 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC148Q8NFR7 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC148Q8NFR7 COX6CP2-201ENST00000444980 225 ntBASIC3.21□□□□□ -1.9
CCDC148Q8NFR7 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC148Q8NFR7 GSTA11P-201ENST00000452866 669 ntBASIC3.21□□□□□ -1.9
CCDC148Q8NFR7 TPRKBP1-201ENST00000456243 481 ntBASIC3.21□□□□□ -1.9
CCDC148Q8NFR7 AP001025.2-201ENST00000490908 477 ntBASIC3.21□□□□□ -1.9
CCDC148Q8NFR7 AC097462.2-201ENST00000504623 481 ntBASIC3.21□□□□□ -1.9
CCDC148Q8NFR7 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC148Q8NFR7 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC148Q8NFR7 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC148Q8NFR7 AC023824.3-201ENST00000569003 562 ntBASIC3.21□□□□□ -1.9
CCDC148Q8NFR7 MIR3605-201ENST00000583214 100 ntBASIC3.21□□□□□ -1.9
CCDC148Q8NFR7 ZNF861P-201ENST00000588126 639 ntBASIC3.21□□□□□ -1.9
CCDC148Q8NFR7 AC023043.3-201ENST00000593113 385 ntBASIC3.21□□□□□ -1.9
CCDC148Q8NFR7 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC148Q8NFR7 AC131902.3-201ENST00000611767 581 ntBASIC3.21□□□□□ -1.9
CCDC148Q8NFR7 AL138880.2-201ENST00000616214 239 ntBASIC3.21□□□□□ -1.9
CCDC148Q8NFR7 AL137790.1-201ENST00000634283 177 ntBASIC3.21□□□□□ -1.9
CCDC148Q8NFR7 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC148Q8NFR7 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC148Q8NFR7 RNA5SP139-201ENST00000364340 117 ntBASIC3.2□□□□□ -1.9
CCDC148Q8NFR7 RNU6-1074P-201ENST00000383995 104 ntBASIC3.2□□□□□ -1.9
CCDC148Q8NFR7 AL121978.1-201ENST00000402778 359 ntBASIC3.2□□□□□ -1.9
CCDC148Q8NFR7 RNU6-712P-201ENST00000410558 100 ntBASIC3.2□□□□□ -1.9
CCDC148Q8NFR7 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.2□□□□□ -1.9
CCDC148Q8NFR7 AC008173.1-201ENST00000418901 264 ntBASIC3.2□□□□□ -1.9
CCDC148Q8NFR7 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.2□□□□□ -1.9
CCDC148Q8NFR7 AC087499.2-201ENST00000432861 149 ntBASIC3.2□□□□□ -1.9
CCDC148Q8NFR7 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC148Q8NFR7 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC148Q8NFR7 RPS29P6-201ENST00000438196 145 ntBASIC3.2□□□□□ -1.9
CCDC148Q8NFR7 AL590639.1-201ENST00000456484 337 ntBASIC3.2□□□□□ -1.9
CCDC148Q8NFR7 AL031183.1-201ENST00000457667 207 ntBASIC3.2□□□□□ -1.9
CCDC148Q8NFR7 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.2□□□□□ -1.9
CCDC148Q8NFR7 VPS26AP1-201ENST00000483197 979 ntBASIC3.2□□□□□ -1.9
CCDC148Q8NFR7 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC148Q8NFR7 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC148Q8NFR7 AC091826.1-201ENST00000514065 313 ntBASIC3.2□□□□□ -1.9
CCDC148Q8NFR7 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
CCDC148Q8NFR7 AC026616.1-201ENST00000523157 525 ntBASIC3.2□□□□□ -1.9
CCDC148Q8NFR7 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.2□□□□□ -1.9
CCDC148Q8NFR7 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC148Q8NFR7 AL157394.1-201ENST00000562983 1224 ntBASIC3.2□□□□□ -1.9
CCDC148Q8NFR7 AP005205.1-201ENST00000563503 508 ntBASIC3.2□□□□□ -1.9
CCDC148Q8NFR7 MTCO3P13-201ENST00000577757 781 ntBASIC3.2□□□□□ -1.9
CCDC148Q8NFR7 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC148Q8NFR7 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.2□□□□□ -1.9
CCDC148Q8NFR7 NUTF2P8-201ENST00000604593 363 ntBASIC3.2□□□□□ -1.9
CCDC148Q8NFR7 AC008083.4-201ENST00000615076 444 ntBASIC3.2□□□□□ -1.9
CCDC148Q8NFR7 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC148Q8NFR7 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.19□□□□□ -1.9
CCDC148Q8NFR7 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms