Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.25□□□□□ -1.73
USP38Q8NB14 USP9YP36-201ENST00000424581 829 ntBASIC4.25□□□□□ -1.73
USP38Q8NB14 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.25□□□□□ -1.73
USP38Q8NB14 KCTD9P3-201ENST00000434597 1169 ntBASIC4.25□□□□□ -1.73
USP38Q8NB14 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
USP38Q8NB14 MTND5P14-201ENST00000441481 1267 ntBASIC4.25□□□□□ -1.73
USP38Q8NB14 AC002381.1-201ENST00000447049 280 ntBASIC4.25□□□□□ -1.73
USP38Q8NB14 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.25□□□□□ -1.73
USP38Q8NB14 RN7SL601P-201ENST00000471221 293 ntBASIC4.25□□□□□ -1.73
USP38Q8NB14 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.25□□□□□ -1.73
USP38Q8NB14 AC006390.1-201ENST00000508068 283 ntBASIC4.25□□□□□ -1.73
USP38Q8NB14 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.25□□□□□ -1.73
USP38Q8NB14 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.25□□□□□ -1.73
USP38Q8NB14 RNA5SP216-201ENST00000516111 123 ntBASIC4.25□□□□□ -1.73
USP38Q8NB14 IGKV2D-23-201ENST00000518179 286 ntBASIC4.25□□□□□ -1.73
USP38Q8NB14 AC008802.1-201ENST00000519121 791 ntBASIC4.25□□□□□ -1.73
USP38Q8NB14 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.25□□□□□ -1.73
USP38Q8NB14 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.25□□□□□ -1.73
USP38Q8NB14 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC4.25□□□□□ -1.73
USP38Q8NB14 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.25□□□□□ -1.73
USP38Q8NB14 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.25□□□□□ -1.73
USP38Q8NB14 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.25□□□□□ -1.73
USP38Q8NB14 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC4.25□□□□□ -1.73
USP38Q8NB14 OR6C7P-201ENST00000547875 934 ntBASIC4.25□□□□□ -1.73
USP38Q8NB14 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.25□□□□□ -1.73
USP38Q8NB14 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.25□□□□□ -1.73
USP38Q8NB14 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.25□□□□□ -1.73
USP38Q8NB14 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.25□□□□□ -1.73
USP38Q8NB14 AC244505.7-201ENST00000599675 272 ntBASIC4.25□□□□□ -1.73
USP38Q8NB14 KC877982.1-201ENST00000602313 470 ntBASIC4.25□□□□□ -1.73
USP38Q8NB14 RNA5SP108-201ENST00000605921 117 ntBASIC4.25□□□□□ -1.73
USP38Q8NB14 AC103710.4-201ENST00000609301 899 ntBASIC4.25□□□□□ -1.73
USP38Q8NB14 AC004908.3-201ENST00000610248 625 ntBASIC4.25□□□□□ -1.73
USP38Q8NB14 MIR8058-201ENST00000615737 89 ntBASIC4.25□□□□□ -1.73
USP38Q8NB14 AC018755.4-201ENST00000619715 454 ntBASIC4.25□□□□□ -1.73
USP38Q8NB14 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
USP38Q8NB14 AC009039.2-201ENST00000624524 529 ntBASIC4.25□□□□□ -1.73
USP38Q8NB14 AC091925.2-201ENST00000625059 256 ntBASIC4.25□□□□□ -1.73
USP38Q8NB14 MIR3974-201ENST00000637126 96 ntBASIC4.25□□□□□ -1.73
USP38Q8NB14 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
USP38Q8NB14 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
USP38Q8NB14 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.25□□□□□ -1.73
USP38Q8NB14 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
USP38Q8NB14 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
USP38Q8NB14 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.24□□□□□ -1.73
USP38Q8NB14 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
USP38Q8NB14 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
USP38Q8NB14 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.24□□□□□ -1.73
USP38Q8NB14 RNU6-777P-201ENST00000364265 104 ntBASIC4.24□□□□□ -1.73
USP38Q8NB14 SNORD6-201ENST00000365444 73 ntBASIC4.24□□□□□ -1.73
USP38Q8NB14 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.24□□□□□ -1.73
USP38Q8NB14 RNU5A-2P-201ENST00000384337 116 ntBASIC4.24□□□□□ -1.73
USP38Q8NB14 RNU6-821P-201ENST00000390995 107 ntBASIC4.24□□□□□ -1.73
USP38Q8NB14 U3.29-201ENST00000391296 212 ntBASIC4.24□□□□□ -1.73
USP38Q8NB14 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.24□□□□□ -1.73
USP38Q8NB14 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.24□□□□□ -1.73
USP38Q8NB14 MTCO2P5-201ENST00000422621 426 ntBASIC4.24□□□□□ -1.73
USP38Q8NB14 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.24□□□□□ -1.73
USP38Q8NB14 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC4.24□□□□□ -1.73
USP38Q8NB14 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.24□□□□□ -1.73
USP38Q8NB14 HMGB1P37-201ENST00000439613 609 ntBASIC4.24□□□□□ -1.73
USP38Q8NB14 AL831737.1-201ENST00000441288 271 ntBASIC4.24□□□□□ -1.73
USP38Q8NB14 RPL7P52-201ENST00000449200 742 ntBASIC4.24□□□□□ -1.73
USP38Q8NB14 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.24□□□□□ -1.73
USP38Q8NB14 HMGB1P15-201ENST00000453854 435 ntBASIC4.24□□□□□ -1.73
USP38Q8NB14 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.24□□□□□ -1.73
USP38Q8NB14 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
USP38Q8NB14 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.24□□□□□ -1.73
USP38Q8NB14 MIR2114-201ENST00000516645 80 ntBASIC4.24□□□□□ -1.73
USP38Q8NB14 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.24□□□□□ -1.73
USP38Q8NB14 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC4.24□□□□□ -1.73
USP38Q8NB14 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.24□□□□□ -1.73
USP38Q8NB14 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.24□□□□□ -1.73
USP38Q8NB14 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC4.24□□□□□ -1.73
USP38Q8NB14 AC141257.3-201ENST00000572906 215 ntBASIC4.24□□□□□ -1.73
USP38Q8NB14 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.24□□□□□ -1.73
USP38Q8NB14 BNIP3P23-201ENST00000599655 511 ntBASIC4.24□□□□□ -1.73
USP38Q8NB14 AC121247.2-201ENST00000604776 136 ntBASIC4.24□□□□□ -1.73
USP38Q8NB14 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC4.24□□□□□ -1.73
USP38Q8NB14 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC4.24□□□□□ -1.73
USP38Q8NB14 AL356266.1-201ENST00000623311 483 ntBASIC4.24□□□□□ -1.73
USP38Q8NB14 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
USP38Q8NB14 MTND4P16-201ENST00000466108 1367 ntBASIC4.24□□□□□ -1.73
USP38Q8NB14 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
USP38Q8NB14 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.23□□□□□ -1.73
USP38Q8NB14 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.23□□□□□ -1.73
USP38Q8NB14 NCAPGP1-201ENST00000505112 1814 ntBASIC4.23□□□□□ -1.73
USP38Q8NB14 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
USP38Q8NB14 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
USP38Q8NB14 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.23□□□□□ -1.73
USP38Q8NB14 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
USP38Q8NB14 HMGN2P8-201ENST00000391458 268 ntBASIC4.23□□□□□ -1.73
USP38Q8NB14 RNU6-920P-201ENST00000410926 92 ntBASIC4.23□□□□□ -1.73
USP38Q8NB14 HMGB1P11-201ENST00000413899 637 ntBASIC4.23□□□□□ -1.73
USP38Q8NB14 RPS7P15-201ENST00000415804 584 ntBASIC4.23□□□□□ -1.73
USP38Q8NB14 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.23□□□□□ -1.73
USP38Q8NB14 LSM1P1-201ENST00000438629 273 ntBASIC4.23□□□□□ -1.73
USP38Q8NB14 ANP32BP2-201ENST00000454525 545 ntBASIC4.23□□□□□ -1.73
USP38Q8NB14 SUMO2P2-201ENST00000456482 255 ntBASIC4.23□□□□□ -1.73
USP38Q8NB14 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 140.9 ms