Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 NANOGP2-201ENST00000435391 727 ntBASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 RPL23AP16-201ENST00000441715 421 ntBASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 RPS20P24-201ENST00000457473 361 ntBASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 RPL23AP44-201ENST00000482216 473 ntBASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 HMGB1P38-201ENST00000490557 577 ntBASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 AC008837.1-201ENST00000511513 412 ntBASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 AC018797.3-201ENST00000513388 1241 ntBASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 AC104057.1-201ENST00000515547 497 ntBASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 MIR4509-3-201ENST00000578671 94 ntBASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 SNORD53-201ENST00000579969 78 ntBASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 MIR4635-201ENST00000583759 79 ntBASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 MIR4509-2-201ENST00000583920 94 ntBASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 AL355812.1-201ENST00000603215 216 ntBASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 MIR4509-1-201ENST00000618224 94 ntBASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.49□□□□□ -2.01
COL27A1Q8IZC6 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
COL27A1Q8IZC6 SEPT7P7-201ENST00000420492 1301 ntBASIC2.49□□□□□ -2.01
COL27A1Q8IZC6 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
COL27A1Q8IZC6 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.49□□□□□ -2.01
COL27A1Q8IZC6 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
COL27A1Q8IZC6 MIR148B-201ENST00000362252 99 ntBASIC2.49□□□□□ -2.01
COL27A1Q8IZC6 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
COL27A1Q8IZC6 BTF3P7-201ENST00000407097 488 ntBASIC2.49□□□□□ -2.01
COL27A1Q8IZC6 AC013410.2-201ENST00000422627 201 ntBASIC2.49□□□□□ -2.01
COL27A1Q8IZC6 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC2.49□□□□□ -2.01
COL27A1Q8IZC6 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.49□□□□□ -2.01
COL27A1Q8IZC6 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
COL27A1Q8IZC6 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.49□□□□□ -2.01
COL27A1Q8IZC6 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.49□□□□□ -2.01
COL27A1Q8IZC6 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.49□□□□□ -2.01
COL27A1Q8IZC6 RPL37P6-202ENST00000464216 403 ntBASIC2.49□□□□□ -2.01
COL27A1Q8IZC6 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.49□□□□□ -2.01
COL27A1Q8IZC6 XACT-201ENST00000468762 497 ntTSL 5 BASIC2.49□□□□□ -2.01
COL27A1Q8IZC6 AP004217.1-201ENST00000480579 346 ntBASIC2.49□□□□□ -2.01
COL27A1Q8IZC6 AC093278.1-201ENST00000494700 600 ntBASIC2.49□□□□□ -2.01
COL27A1Q8IZC6 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
COL27A1Q8IZC6 BOLA3P3-201ENST00000505182 232 ntBASIC2.49□□□□□ -2.01
COL27A1Q8IZC6 HIGD1AP6-201ENST00000521833 279 ntBASIC2.49□□□□□ -2.01
COL27A1Q8IZC6 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC2.49□□□□□ -2.01
COL27A1Q8IZC6 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
COL27A1Q8IZC6 OR8K4P-201ENST00000534608 872 ntBASIC2.49□□□□□ -2.01
COL27A1Q8IZC6 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.49□□□□□ -2.01
COL27A1Q8IZC6 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC2.49□□□□□ -2.01
COL27A1Q8IZC6 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.49□□□□□ -2.01
COL27A1Q8IZC6 AL391156.1-201ENST00000554965 554 ntBASIC2.49□□□□□ -2.01
COL27A1Q8IZC6 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC2.49□□□□□ -2.01
COL27A1Q8IZC6 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC2.49□□□□□ -2.01
COL27A1Q8IZC6 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.49□□□□□ -2.01
COL27A1Q8IZC6 ZNF861P-201ENST00000588126 639 ntBASIC2.49□□□□□ -2.01
COL27A1Q8IZC6 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
COL27A1Q8IZC6 RPP40P2-201ENST00000603596 712 ntBASIC2.49□□□□□ -2.01
COL27A1Q8IZC6 AC011458.1-201ENST00000604034 617 ntBASIC2.49□□□□□ -2.01
COL27A1Q8IZC6 AC024257.5-201ENST00000612739 531 ntBASIC2.49□□□□□ -2.01
COL27A1Q8IZC6 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC2.49□□□□□ -2.01
COL27A1Q8IZC6 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
COL27A1Q8IZC6 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
COL27A1Q8IZC6 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
COL27A1Q8IZC6 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
COL27A1Q8IZC6 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
COL27A1Q8IZC6 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC2.48□□□□□ -2.01
COL27A1Q8IZC6 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC2.48□□□□□ -2.01
COL27A1Q8IZC6 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
COL27A1Q8IZC6 PARD3-204ENST00000374768 799 ntTSL 3 BASIC2.48□□□□□ -2.01
COL27A1Q8IZC6 MIR592-201ENST00000384959 97 ntBASIC2.48□□□□□ -2.01
COL27A1Q8IZC6 MTCO1P56-201ENST00000401674 224 ntBASIC2.48□□□□□ -2.01
COL27A1Q8IZC6 SFR1P1-201ENST00000403720 688 ntBASIC2.48□□□□□ -2.01
COL27A1Q8IZC6 RPL31P2-201ENST00000413849 377 ntBASIC2.48□□□□□ -2.01
COL27A1Q8IZC6 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC2.48□□□□□ -2.01
COL27A1Q8IZC6 AL138785.1-201ENST00000425821 331 ntBASIC2.48□□□□□ -2.01
COL27A1Q8IZC6 RPP40P1-201ENST00000426762 456 ntBASIC2.48□□□□□ -2.01
COL27A1Q8IZC6 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC2.48□□□□□ -2.01
COL27A1Q8IZC6 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC2.48□□□□□ -2.01
COL27A1Q8IZC6 AC096992.1-201ENST00000459808 709 ntBASIC2.48□□□□□ -2.01
COL27A1Q8IZC6 AP002884.2-201ENST00000471647 395 ntBASIC2.48□□□□□ -2.01
COL27A1Q8IZC6 AP000926.1-201ENST00000479573 241 ntBASIC2.48□□□□□ -2.01
COL27A1Q8IZC6 snoZ278.1-201ENST00000517059 112 ntBASIC2.48□□□□□ -2.01
COL27A1Q8IZC6 RNU6-1231P-201ENST00000517185 103 ntBASIC2.48□□□□□ -2.01
COL27A1Q8IZC6 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC2.48□□□□□ -2.01
COL27A1Q8IZC6 OR4A45P-201ENST00000529954 901 ntBASIC2.48□□□□□ -2.01
COL27A1Q8IZC6 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.48□□□□□ -2.01
COL27A1Q8IZC6 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC2.48□□□□□ -2.01
COL27A1Q8IZC6 AC087897.1-201ENST00000550134 156 ntBASIC2.48□□□□□ -2.01
COL27A1Q8IZC6 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.48□□□□□ -2.01
COL27A1Q8IZC6 VN1R87P-201ENST00000596706 487 ntBASIC2.48□□□□□ -2.01
COL27A1Q8IZC6 AC091057.3-201ENST00000602684 733 ntBASIC2.48□□□□□ -2.01
COL27A1Q8IZC6 MIR6864-201ENST00000617935 70 ntBASIC2.48□□□□□ -2.01
COL27A1Q8IZC6 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
COL27A1Q8IZC6 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.48□□□□□ -2.01
COL27A1Q8IZC6 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
COL27A1Q8IZC6 PWAR6-201ENST00000552334 4618 ntBASIC2.48□□□□□ -2.01
COL27A1Q8IZC6 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
COL27A1Q8IZC6 AC025125.1-201ENST00000624743 1922 ntBASIC2.48□□□□□ -2.01
COL27A1Q8IZC6 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
COL27A1Q8IZC6 SGO1P1-201ENST00000603525 1447 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms