Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.62□□□□□ -1.83
LDB1Q86U70 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.62□□□□□ -1.83
LDB1Q86U70 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.62□□□□□ -1.83
LDB1Q86U70 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.62□□□□□ -1.83
LDB1Q86U70 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.62□□□□□ -1.83
LDB1Q86U70 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.62□□□□□ -1.83
LDB1Q86U70 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.62□□□□□ -1.83
LDB1Q86U70 AL451086.1-201ENST00000605596 223 ntBASIC3.62□□□□□ -1.83
LDB1Q86U70 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.62□□□□□ -1.83
LDB1Q86U70 AC122133.1-201ENST00000613964 233 ntBASIC3.62□□□□□ -1.83
LDB1Q86U70 AL590099.1-201ENST00000615276 138 ntBASIC3.62□□□□□ -1.83
LDB1Q86U70 AC078883.4-201ENST00000623218 367 ntBASIC3.62□□□□□ -1.83
LDB1Q86U70 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.62□□□□□ -1.83
LDB1Q86U70 OR8B1P-202ENST00000641132 1178 ntBASIC3.62□□□□□ -1.83
LDB1Q86U70 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LDB1Q86U70 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LDB1Q86U70 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LDB1Q86U70 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LDB1Q86U70 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.61□□□□□ -1.83
LDB1Q86U70 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LDB1Q86U70 RNU6-1155P-201ENST00000363554 107 ntBASIC3.61□□□□□ -1.83
LDB1Q86U70 RNA5SP51-201ENST00000364750 119 ntBASIC3.61□□□□□ -1.83
LDB1Q86U70 RNU6-359P-201ENST00000365466 108 ntBASIC3.61□□□□□ -1.83
LDB1Q86U70 RNU6-1074P-201ENST00000383995 104 ntBASIC3.61□□□□□ -1.83
LDB1Q86U70 AC007066.1-201ENST00000392902 381 ntBASIC3.61□□□□□ -1.83
LDB1Q86U70 MIR1305-201ENST00000408300 86 ntBASIC3.61□□□□□ -1.83
LDB1Q86U70 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.61□□□□□ -1.83
LDB1Q86U70 SNORA57.3-201ENST00000411095 141 ntBASIC3.61□□□□□ -1.83
LDB1Q86U70 MTCO1P17-201ENST00000411522 491 ntBASIC3.61□□□□□ -1.83
LDB1Q86U70 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.61□□□□□ -1.83
LDB1Q86U70 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.61□□□□□ -1.83
LDB1Q86U70 USP9YP26-201ENST00000421008 661 ntBASIC3.61□□□□□ -1.83
LDB1Q86U70 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.61□□□□□ -1.83
LDB1Q86U70 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.61□□□□□ -1.83
LDB1Q86U70 AC084357.1-201ENST00000473404 255 ntBASIC3.61□□□□□ -1.83
LDB1Q86U70 RPS3AP50-201ENST00000487064 803 ntBASIC3.61□□□□□ -1.83
LDB1Q86U70 AC022447.3-201ENST00000506865 495 ntBASIC3.61□□□□□ -1.83
LDB1Q86U70 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.61□□□□□ -1.83
LDB1Q86U70 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.61□□□□□ -1.83
LDB1Q86U70 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.61□□□□□ -1.83
LDB1Q86U70 AC119751.5-201ENST00000514077 770 ntBASIC3.61□□□□□ -1.83
LDB1Q86U70 RNU6-1073P-201ENST00000517182 106 ntBASIC3.61□□□□□ -1.83
LDB1Q86U70 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.61□□□□□ -1.83
LDB1Q86U70 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.61□□□□□ -1.83
LDB1Q86U70 AC007834.2-201ENST00000536310 343 ntBASIC3.61□□□□□ -1.83
LDB1Q86U70 OSBPL9P5-201ENST00000542581 171 ntBASIC3.61□□□□□ -1.83
LDB1Q86U70 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.61□□□□□ -1.83
LDB1Q86U70 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.61□□□□□ -1.83
LDB1Q86U70 AC090888.1-201ENST00000561335 1141 ntBASIC3.61□□□□□ -1.83
LDB1Q86U70 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.61□□□□□ -1.83
LDB1Q86U70 AC068313.1-201ENST00000604028 1008 ntBASIC3.61□□□□□ -1.83
LDB1Q86U70 AL049634.3-201ENST00000604968 457 ntBASIC3.61□□□□□ -1.83
LDB1Q86U70 AC097468.3-201ENST00000607956 456 ntBASIC3.61□□□□□ -1.83
LDB1Q86U70 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.61□□□□□ -1.83
LDB1Q86U70 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.61□□□□□ -1.83
LDB1Q86U70 AL645937.1-201ENST00000641739 1652 ntBASIC3.61□□□□□ -1.83
LDB1Q86U70 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LDB1Q86U70 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
LDB1Q86U70 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LDB1Q86U70 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.6□□□□□ -1.83
LDB1Q86U70 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.6□□□□□ -1.83
LDB1Q86U70 AC066616.2-201ENST00000559334 1481 ntBASIC3.6□□□□□ -1.83
LDB1Q86U70 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LDB1Q86U70 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LDB1Q86U70 AC007823.1-201ENST00000569932 1566 ntBASIC3.6□□□□□ -1.83
LDB1Q86U70 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
LDB1Q86U70 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LDB1Q86U70 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.6□□□□□ -1.83
LDB1Q86U70 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
LDB1Q86U70 RNU6-600P-201ENST00000362524 99 ntBASIC3.6□□□□□ -1.83
LDB1Q86U70 RNU6-97P-201ENST00000363387 104 ntBASIC3.6□□□□□ -1.83
LDB1Q86U70 RNA5SP42-201ENST00000364278 115 ntBASIC3.6□□□□□ -1.83
LDB1Q86U70 RNU6-1207P-201ENST00000384343 107 ntBASIC3.6□□□□□ -1.83
LDB1Q86U70 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.6□□□□□ -1.83
LDB1Q86U70 HMGB1P11-201ENST00000413899 637 ntBASIC3.6□□□□□ -1.83
LDB1Q86U70 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.6□□□□□ -1.83
LDB1Q86U70 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.6□□□□□ -1.83
LDB1Q86U70 BEND7P1-201ENST00000422058 457 ntBASIC3.6□□□□□ -1.83
LDB1Q86U70 RPL21P66-201ENST00000426566 466 ntBASIC3.6□□□□□ -1.83
LDB1Q86U70 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.6□□□□□ -1.83
LDB1Q86U70 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.6□□□□□ -1.83
LDB1Q86U70 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.6□□□□□ -1.83
LDB1Q86U70 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.6□□□□□ -1.83
LDB1Q86U70 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.6□□□□□ -1.83
LDB1Q86U70 AC010655.1-201ENST00000449336 292 ntBASIC3.6□□□□□ -1.83
LDB1Q86U70 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.6□□□□□ -1.83
LDB1Q86U70 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.6□□□□□ -1.83
LDB1Q86U70 AC091564.1-201ENST00000464563 479 ntBASIC3.6□□□□□ -1.83
LDB1Q86U70 AC093278.1-201ENST00000494700 600 ntBASIC3.6□□□□□ -1.83
LDB1Q86U70 RPL23AP55-201ENST00000498163 452 ntBASIC3.6□□□□□ -1.83
LDB1Q86U70 UBE2CP3-201ENST00000502715 450 ntBASIC3.6□□□□□ -1.83
LDB1Q86U70 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.6□□□□□ -1.83
LDB1Q86U70 AC111000.2-201ENST00000507775 550 ntBASIC3.6□□□□□ -1.83
LDB1Q86U70 AC005178.1-201ENST00000508392 440 ntBASIC3.6□□□□□ -1.83
LDB1Q86U70 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.6□□□□□ -1.83
LDB1Q86U70 SNORA70.18-201ENST00000516696 98 ntBASIC3.6□□□□□ -1.83
LDB1Q86U70 AP004247.1-201ENST00000531556 1289 ntBASIC3.6□□□□□ -1.83
LDB1Q86U70 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.6□□□□□ -1.83
LDB1Q86U70 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.6□□□□□ -1.83
LDB1Q86U70 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms