Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.97□□□□□ -1.61
LRFN4Q6PJG9 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.97□□□□□ -1.61
LRFN4Q6PJG9 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LRFN4Q6PJG9 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LRFN4Q6PJG9 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.97□□□□□ -1.61
LRFN4Q6PJG9 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.97□□□□□ -1.61
LRFN4Q6PJG9 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
LRFN4Q6PJG9 BTBD10P1-201ENST00000549824 1352 ntBASIC4.97□□□□□ -1.61
LRFN4Q6PJG9 Y_RNA.80-201ENST00000362996 102 ntBASIC4.97□□□□□ -1.61
LRFN4Q6PJG9 RNA5SP131-201ENST00000365452 119 ntBASIC4.97□□□□□ -1.61
LRFN4Q6PJG9 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LRFN4Q6PJG9 RNU6-1050P-201ENST00000410388 107 ntBASIC4.97□□□□□ -1.61
LRFN4Q6PJG9 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.97□□□□□ -1.61
LRFN4Q6PJG9 AC099677.1-201ENST00000420575 175 ntBASIC4.97□□□□□ -1.61
LRFN4Q6PJG9 RPL21P109-201ENST00000422213 475 ntBASIC4.97□□□□□ -1.61
LRFN4Q6PJG9 AL662874.1-201ENST00000426065 230 ntBASIC4.97□□□□□ -1.61
LRFN4Q6PJG9 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.97□□□□□ -1.61
LRFN4Q6PJG9 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.97□□□□□ -1.61
LRFN4Q6PJG9 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.97□□□□□ -1.61
LRFN4Q6PJG9 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.97□□□□□ -1.61
LRFN4Q6PJG9 NXT1P1-201ENST00000458481 316 ntBASIC4.97□□□□□ -1.61
LRFN4Q6PJG9 AC104472.2-201ENST00000469035 601 ntBASIC4.97□□□□□ -1.61
LRFN4Q6PJG9 COX6B1P2-201ENST00000489624 230 ntBASIC4.97□□□□□ -1.61
LRFN4Q6PJG9 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LRFN4Q6PJG9 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.97□□□□□ -1.61
LRFN4Q6PJG9 AC026782.1-201ENST00000512952 449 ntBASIC4.97□□□□□ -1.61
LRFN4Q6PJG9 RNU6-1332P-201ENST00000516666 104 ntBASIC4.97□□□□□ -1.61
LRFN4Q6PJG9 SNORA43.3-201ENST00000517240 103 ntBASIC4.97□□□□□ -1.61
LRFN4Q6PJG9 RNU6-323P-201ENST00000521915 107 ntBASIC4.97□□□□□ -1.61
LRFN4Q6PJG9 AP000676.2-201ENST00000529711 301 ntBASIC4.97□□□□□ -1.61
LRFN4Q6PJG9 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.97□□□□□ -1.61
LRFN4Q6PJG9 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.97□□□□□ -1.61
LRFN4Q6PJG9 MIR4472-2-201ENST00000582069 67 ntBASIC4.97□□□□□ -1.61
LRFN4Q6PJG9 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.97□□□□□ -1.61
LRFN4Q6PJG9 AC104763.2-201ENST00000604179 382 ntBASIC4.97□□□□□ -1.61
LRFN4Q6PJG9 AC018462.2-201ENST00000605375 395 ntBASIC4.97□□□□□ -1.61
LRFN4Q6PJG9 AC090425.1-201ENST00000610007 140 ntBASIC4.97□□□□□ -1.61
LRFN4Q6PJG9 DLEU2_5.1-201ENST00000615567 84 ntBASIC4.97□□□□□ -1.61
LRFN4Q6PJG9 AL122125.1-201ENST00000616999 600 ntBASIC4.97□□□□□ -1.61
LRFN4Q6PJG9 MIR6778-201ENST00000617912 73 ntBASIC4.97□□□□□ -1.61
LRFN4Q6PJG9 AP001005.3-201ENST00000622049 129 ntBASIC4.97□□□□□ -1.61
LRFN4Q6PJG9 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.97□□□□□ -1.61
LRFN4Q6PJG9 MIR4275-201ENST00000636486 87 ntBASIC4.97□□□□□ -1.61
LRFN4Q6PJG9 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
LRFN4Q6PJG9 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LRFN4Q6PJG9 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LRFN4Q6PJG9 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
LRFN4Q6PJG9 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
LRFN4Q6PJG9 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
LRFN4Q6PJG9 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
LRFN4Q6PJG9 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.61
LRFN4Q6PJG9 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
LRFN4Q6PJG9 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.61
LRFN4Q6PJG9 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.96□□□□□ -1.61
LRFN4Q6PJG9 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LRFN4Q6PJG9 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC4.96□□□□□ -1.62
LRFN4Q6PJG9 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LRFN4Q6PJG9 Y_RNA.193-201ENST00000363979 102 ntBASIC4.96□□□□□ -1.62
LRFN4Q6PJG9 SNORA23-201ENST00000365128 182 ntBASIC4.96□□□□□ -1.62
LRFN4Q6PJG9 RNU6-1318P-201ENST00000365389 103 ntBASIC4.96□□□□□ -1.62
LRFN4Q6PJG9 SNORA70.6-201ENST00000383934 134 ntBASIC4.96□□□□□ -1.62
LRFN4Q6PJG9 Y_RNA.557-201ENST00000384680 107 ntBASIC4.96□□□□□ -1.62
LRFN4Q6PJG9 MT-TG-201ENST00000387429 68 ntBASIC4.96□□□□□ -1.62
LRFN4Q6PJG9 AC110754.1-201ENST00000399740 601 ntBASIC4.96□□□□□ -1.62
LRFN4Q6PJG9 AL009179.1-201ENST00000406085 265 ntBASIC4.96□□□□□ -1.62
LRFN4Q6PJG9 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.96□□□□□ -1.62
LRFN4Q6PJG9 RNU4-6P-201ENST00000410804 122 ntBASIC4.96□□□□□ -1.62
LRFN4Q6PJG9 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.96□□□□□ -1.62
LRFN4Q6PJG9 AL133482.1-201ENST00000415988 498 ntBASIC4.96□□□□□ -1.62
LRFN4Q6PJG9 EEF1A1P29-201ENST00000416082 1096 ntBASIC4.96□□□□□ -1.62
LRFN4Q6PJG9 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.96□□□□□ -1.62
LRFN4Q6PJG9 RPS3P2-201ENST00000421346 701 ntBASIC4.96□□□□□ -1.62
LRFN4Q6PJG9 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.96□□□□□ -1.62
LRFN4Q6PJG9 AL669831.1-202ENST00000428504 417 ntBASIC4.96□□□□□ -1.62
LRFN4Q6PJG9 LINC02210-201ENST00000444561 288 ntBASIC4.96□□□□□ -1.62
LRFN4Q6PJG9 MRPL48P1-201ENST00000445390 636 ntBASIC4.96□□□□□ -1.62
LRFN4Q6PJG9 RPL12P25-201ENST00000455592 494 ntBASIC4.96□□□□□ -1.62
LRFN4Q6PJG9 DHFRP3-201ENST00000455595 559 ntBASIC4.96□□□□□ -1.62
LRFN4Q6PJG9 MTATP8P1-201ENST00000467115 207 ntBASIC4.96□□□□□ -1.62
LRFN4Q6PJG9 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
LRFN4Q6PJG9 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.96□□□□□ -1.62
LRFN4Q6PJG9 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.96□□□□□ -1.62
LRFN4Q6PJG9 Y_RNA.661-201ENST00000516003 99 ntBASIC4.96□□□□□ -1.62
LRFN4Q6PJG9 SNORD46.2-201ENST00000516021 102 ntBASIC4.96□□□□□ -1.62
LRFN4Q6PJG9 RNU6-390P-201ENST00000516259 103 ntBASIC4.96□□□□□ -1.62
LRFN4Q6PJG9 RNU6-352P-201ENST00000516908 107 ntBASIC4.96□□□□□ -1.62
LRFN4Q6PJG9 RNU6-677P-201ENST00000516914 101 ntBASIC4.96□□□□□ -1.62
LRFN4Q6PJG9 RN7SKP234-201ENST00000517173 224 ntBASIC4.96□□□□□ -1.62
LRFN4Q6PJG9 AP006587.4-201ENST00000526053 529 ntBASIC4.96□□□□□ -1.62
LRFN4Q6PJG9 AC122688.1-201ENST00000541494 223 ntBASIC4.96□□□□□ -1.62
LRFN4Q6PJG9 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.96□□□□□ -1.62
LRFN4Q6PJG9 TVP23CP2-201ENST00000571473 623 ntBASIC4.96□□□□□ -1.62
LRFN4Q6PJG9 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.96□□□□□ -1.62
LRFN4Q6PJG9 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.96□□□□□ -1.62
LRFN4Q6PJG9 MIR6133-201ENST00000617057 108 ntBASIC4.96□□□□□ -1.62
LRFN4Q6PJG9 AL162373.1-201ENST00000620433 407 ntBASIC4.96□□□□□ -1.62
LRFN4Q6PJG9 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.96□□□□□ -1.62
LRFN4Q6PJG9 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC4.96□□□□□ -1.62
LRFN4Q6PJG9 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
LRFN4Q6PJG9 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms