Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 MTCO1P23-201ENST00000415223 1526 ntBASIC4.17□□□□□ -1.74
CCDC96Q2M329 AC007656.2-201ENST00000624902 4547 ntBASIC4.17□□□□□ -1.74
CCDC96Q2M329 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC96Q2M329 RNU6-157P-201ENST00000383957 107 ntBASIC4.17□□□□□ -1.74
CCDC96Q2M329 SNORD116-8-201ENST00000384365 95 ntBASIC4.17□□□□□ -1.74
CCDC96Q2M329 AC016769.3-201ENST00000396562 315 ntBASIC4.17□□□□□ -1.74
CCDC96Q2M329 RPS3AP26-201ENST00000398259 784 ntBASIC4.17□□□□□ -1.74
CCDC96Q2M329 CYCSP45-201ENST00000402289 315 ntBASIC4.17□□□□□ -1.74
CCDC96Q2M329 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC96Q2M329 AC006946.1-201ENST00000429106 328 ntBASIC4.17□□□□□ -1.74
CCDC96Q2M329 TXNL1P1-201ENST00000429528 554 ntBASIC4.17□□□□□ -1.74
CCDC96Q2M329 SEPT7P5-201ENST00000434048 306 ntBASIC4.17□□□□□ -1.74
CCDC96Q2M329 MTND4LP10-201ENST00000435146 291 ntBASIC4.17□□□□□ -1.74
CCDC96Q2M329 USP9YP22-201ENST00000438971 294 ntBASIC4.17□□□□□ -1.74
CCDC96Q2M329 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC4.17□□□□□ -1.74
CCDC96Q2M329 COX6CP18-201ENST00000448769 222 ntBASIC4.17□□□□□ -1.74
CCDC96Q2M329 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC96Q2M329 CYCSP35-201ENST00000451978 304 ntBASIC4.17□□□□□ -1.74
CCDC96Q2M329 PNPLA4P1-201ENST00000458328 305 ntBASIC4.17□□□□□ -1.74
CCDC96Q2M329 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.17□□□□□ -1.74
CCDC96Q2M329 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.17□□□□□ -1.74
CCDC96Q2M329 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.17□□□□□ -1.74
CCDC96Q2M329 KLHL2P1-201ENST00000508691 521 ntBASIC4.17□□□□□ -1.74
CCDC96Q2M329 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC96Q2M329 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC4.17□□□□□ -1.74
CCDC96Q2M329 SNORA3.4-201ENST00000515969 96 ntBASIC4.17□□□□□ -1.74
CCDC96Q2M329 RNU6-27P-201ENST00000516146 107 ntBASIC4.17□□□□□ -1.74
CCDC96Q2M329 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC96Q2M329 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.17□□□□□ -1.74
CCDC96Q2M329 AC103843.2-201ENST00000530523 682 ntBASIC4.17□□□□□ -1.74
CCDC96Q2M329 AC007834.2-201ENST00000536310 343 ntBASIC4.17□□□□□ -1.74
CCDC96Q2M329 OSBPL9P5-201ENST00000542581 171 ntBASIC4.17□□□□□ -1.74
CCDC96Q2M329 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.17□□□□□ -1.74
CCDC96Q2M329 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.17□□□□□ -1.74
CCDC96Q2M329 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC96Q2M329 AL109653.1-201ENST00000603091 248 ntBASIC4.17□□□□□ -1.74
CCDC96Q2M329 AC091946.2-201ENST00000606105 291 ntBASIC4.17□□□□□ -1.74
CCDC96Q2M329 AL355810.1-201ENST00000614629 552 ntBASIC4.17□□□□□ -1.74
CCDC96Q2M329 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC4.17□□□□□ -1.74
CCDC96Q2M329 U6.105-201ENST00000637379 88 ntBASIC4.17□□□□□ -1.74
CCDC96Q2M329 AC012321.1-201ENST00000561622 1588 ntBASIC4.17□□□□□ -1.74
CCDC96Q2M329 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
CCDC96Q2M329 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC96Q2M329 ZNF542P-204ENST00000482727 1305 ntBASIC4.17□□□□□ -1.74
CCDC96Q2M329 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC96Q2M329 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC96Q2M329 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC96Q2M329 MIR208A-201ENST00000362287 71 ntBASIC4.16□□□□□ -1.74
CCDC96Q2M329 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC96Q2M329 Y_RNA.465-201ENST00000384293 102 ntBASIC4.16□□□□□ -1.74
CCDC96Q2M329 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC96Q2M329 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC96Q2M329 HIGD1AP11-201ENST00000438361 280 ntBASIC4.16□□□□□ -1.74
CCDC96Q2M329 RPL23AP76-201ENST00000441860 458 ntBASIC4.16□□□□□ -1.74
CCDC96Q2M329 RFC5P1-201ENST00000454419 874 ntBASIC4.16□□□□□ -1.74
CCDC96Q2M329 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC96Q2M329 RPS23P3-201ENST00000470993 430 ntBASIC4.16□□□□□ -1.74
CCDC96Q2M329 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC96Q2M329 AC104090.1-201ENST00000506341 1171 ntBASIC4.16□□□□□ -1.74
CCDC96Q2M329 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC96Q2M329 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC96Q2M329 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.16□□□□□ -1.74
CCDC96Q2M329 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.16□□□□□ -1.74
CCDC96Q2M329 CA1-215ENST00000522389 551 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC96Q2M329 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC96Q2M329 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC4.16□□□□□ -1.74
CCDC96Q2M329 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC96Q2M329 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC96Q2M329 BNIP3P26-201ENST00000600827 554 ntBASIC4.16□□□□□ -1.74
CCDC96Q2M329 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC96Q2M329 SRGNP1-201ENST00000603392 451 ntBASIC4.16□□□□□ -1.74
CCDC96Q2M329 AC093783.1-201ENST00000612976 329 ntBASIC4.16□□□□□ -1.74
CCDC96Q2M329 AC008121.2-201ENST00000614647 523 ntBASIC4.16□□□□□ -1.74
CCDC96Q2M329 AC095031.1-201ENST00000623685 672 ntBASIC4.16□□□□□ -1.74
CCDC96Q2M329 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC96Q2M329 AC244205.2-202ENST00000635781 342 ntBASIC4.16□□□□□ -1.74
CCDC96Q2M329 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC96Q2M329 AC244258.1-201ENST00000637553 1071 ntBASIC4.16□□□□□ -1.74
CCDC96Q2M329 CR381670.1-201ENST00000624291 1693 ntBASIC4.16□□□□□ -1.74
CCDC96Q2M329 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.15□□□□□ -1.74
CCDC96Q2M329 SGO1P2-201ENST00000429458 1589 ntBASIC4.15□□□□□ -1.74
CCDC96Q2M329 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.15□□□□□ -1.74
CCDC96Q2M329 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CCDC96Q2M329 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.15□□□□□ -1.75
CCDC96Q2M329 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC96Q2M329 MIR183-201ENST00000384958 110 ntBASIC4.15□□□□□ -1.75
CCDC96Q2M329 MIR506-201ENST00000384998 124 ntBASIC4.15□□□□□ -1.75
CCDC96Q2M329 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.15□□□□□ -1.75
CCDC96Q2M329 RNU2-15P-201ENST00000410692 191 ntBASIC4.15□□□□□ -1.75
CCDC96Q2M329 BX842559.1-201ENST00000419615 532 ntBASIC4.15□□□□□ -1.75
CCDC96Q2M329 DPPA2P1-201ENST00000428060 556 ntBASIC4.15□□□□□ -1.75
CCDC96Q2M329 AC092641.1-201ENST00000440229 772 ntBASIC4.15□□□□□ -1.75
CCDC96Q2M329 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC96Q2M329 OR6K5P-201ENST00000447050 945 ntBASIC4.15□□□□□ -1.75
CCDC96Q2M329 VN1R10P-201ENST00000447106 875 ntBASIC4.15□□□□□ -1.75
CCDC96Q2M329 PRDX3P3-201ENST00000447765 522 ntBASIC4.15□□□□□ -1.75
CCDC96Q2M329 ART2BP-201ENST00000453501 499 ntBASIC4.15□□□□□ -1.75
CCDC96Q2M329 AC092757.1-201ENST00000467293 467 ntBASIC4.15□□□□□ -1.75
CCDC96Q2M329 RPL23AP14-201ENST00000468281 468 ntBASIC4.15□□□□□ -1.75
CCDC96Q2M329 HMGB1P25-201ENST00000468402 607 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 136.9 ms