Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PCDH1Q08174 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
PCDH1Q08174 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PCDH1Q08174 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCDH1Q08174 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.25□□□□□ -1.57
PCDH1Q08174 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
PCDH1Q08174 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCDH1Q08174 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PCDH1Q08174 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.25□□□□□ -1.57
PCDH1Q08174 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCDH1Q08174 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PCDH1Q08174 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.25□□□□□ -1.57
PCDH1Q08174 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCDH1Q08174 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.25□□□□□ -1.57
PCDH1Q08174 SNORA70.6-201ENST00000383934 134 ntBASIC5.25□□□□□ -1.57
PCDH1Q08174 Y_RNA.404-201ENST00000383978 102 ntBASIC5.25□□□□□ -1.57
PCDH1Q08174 Y_RNA.455-201ENST00000384230 98 ntBASIC5.25□□□□□ -1.57
PCDH1Q08174 Y_RNA.574-201ENST00000384766 95 ntBASIC5.25□□□□□ -1.57
PCDH1Q08174 AL445189.1-201ENST00000405722 338 ntBASIC5.25□□□□□ -1.57
PCDH1Q08174 AL583834.1-201ENST00000406943 343 ntBASIC5.25□□□□□ -1.57
PCDH1Q08174 RNA5SP178-201ENST00000410380 128 ntBASIC5.25□□□□□ -1.57
PCDH1Q08174 RNU4-65P-201ENST00000410473 140 ntBASIC5.25□□□□□ -1.57
PCDH1Q08174 RN7SKP206-201ENST00000410823 293 ntBASIC5.25□□□□□ -1.57
PCDH1Q08174 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC5.25□□□□□ -1.57
PCDH1Q08174 AC093151.1-201ENST00000427711 313 ntBASIC5.25□□□□□ -1.57
PCDH1Q08174 RPL23AP69-201ENST00000431134 458 ntBASIC5.25□□□□□ -1.57
PCDH1Q08174 GSTA11P-201ENST00000452866 669 ntBASIC5.25□□□□□ -1.57
PCDH1Q08174 AC007967.1-201ENST00000455422 1159 ntBASIC5.25□□□□□ -1.57
PCDH1Q08174 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.25□□□□□ -1.57
PCDH1Q08174 snoU109.4-201ENST00000458953 143 ntBASIC5.25□□□□□ -1.57
PCDH1Q08174 RNU7-167P-201ENST00000459160 62 ntBASIC5.25□□□□□ -1.57
PCDH1Q08174 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PCDH1Q08174 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.25□□□□□ -1.57
PCDH1Q08174 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC5.25□□□□□ -1.57
PCDH1Q08174 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC5.25□□□□□ -1.57
PCDH1Q08174 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.25□□□□□ -1.57
PCDH1Q08174 AC005798.1-201ENST00000513715 387 ntBASIC5.25□□□□□ -1.57
PCDH1Q08174 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.25□□□□□ -1.57
PCDH1Q08174 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.25□□□□□ -1.57
PCDH1Q08174 Y_RNA.670-201ENST00000516255 105 ntBASIC5.25□□□□□ -1.57
PCDH1Q08174 AC105031.1-201ENST00000518550 476 ntBASIC5.25□□□□□ -1.57
PCDH1Q08174 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.25□□□□□ -1.57
PCDH1Q08174 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.25□□□□□ -1.57
PCDH1Q08174 GSTP1P1-201ENST00000548078 319 ntBASIC5.25□□□□□ -1.57
PCDH1Q08174 AC015720.2-201ENST00000567709 334 ntBASIC5.25□□□□□ -1.57
PCDH1Q08174 RPL23AP84-201ENST00000571193 464 ntBASIC5.25□□□□□ -1.57
PCDH1Q08174 MIR1273E-201ENST00000581165 102 ntBASIC5.25□□□□□ -1.57
PCDH1Q08174 MIR4505-201ENST00000582238 73 ntBASIC5.25□□□□□ -1.57
PCDH1Q08174 AC018462.2-201ENST00000605375 395 ntBASIC5.25□□□□□ -1.57
PCDH1Q08174 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC5.25□□□□□ -1.57
PCDH1Q08174 AC244107.2-201ENST00000611773 76 ntBASIC5.25□□□□□ -1.57
PCDH1Q08174 RNA5SP440-201ENST00000612665 119 ntBASIC5.25□□□□□ -1.57
PCDH1Q08174 AC109583.2-201ENST00000617367 129 ntBASIC5.25□□□□□ -1.57
PCDH1Q08174 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.25□□□□□ -1.57
PCDH1Q08174 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC5.25□□□□□ -1.57
PCDH1Q08174 AC132068.1-201ENST00000623805 459 ntBASIC5.25□□□□□ -1.57
PCDH1Q08174 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC5.25□□□□□ -1.57
PCDH1Q08174 AC116667.1-201ENST00000604855 2072 ntBASIC5.25□□□□□ -1.57
PCDH1Q08174 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCDH1Q08174 AL034549.2-201ENST00000618285 3373 ntBASIC5.25□□□□□ -1.57
PCDH1Q08174 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
PCDH1Q08174 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PCDH1Q08174 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PCDH1Q08174 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PCDH1Q08174 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PCDH1Q08174 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PCDH1Q08174 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
PCDH1Q08174 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PCDH1Q08174 Y_RNA.496-201ENST00000384444 101 ntBASIC5.24□□□□□ -1.57
PCDH1Q08174 RNU6-393P-201ENST00000384475 107 ntBASIC5.24□□□□□ -1.57
PCDH1Q08174 Y_RNA.594-201ENST00000410373 140 ntBASIC5.24□□□□□ -1.57
PCDH1Q08174 HNRNPDLP1-201ENST00000412834 550 ntBASIC5.24□□□□□ -1.57
PCDH1Q08174 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.24□□□□□ -1.57
PCDH1Q08174 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.24□□□□□ -1.57
PCDH1Q08174 RPL30P3-201ENST00000424262 333 ntBASIC5.24□□□□□ -1.57
PCDH1Q08174 FAR2P4-202ENST00000425399 584 ntBASIC5.24□□□□□ -1.57
PCDH1Q08174 RSL24D1P6-201ENST00000426934 401 ntBASIC5.24□□□□□ -1.57
PCDH1Q08174 CYCSP24-201ENST00000445119 316 ntBASIC5.24□□□□□ -1.57
PCDH1Q08174 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.24□□□□□ -1.57
PCDH1Q08174 BX276092.4-201ENST00000452056 248 ntBASIC5.24□□□□□ -1.57
PCDH1Q08174 AC087385.1-201ENST00000475062 312 ntBASIC5.24□□□□□ -1.57
PCDH1Q08174 RNU6-635P-201ENST00000516651 102 ntBASIC5.24□□□□□ -1.57
PCDH1Q08174 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PCDH1Q08174 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.24□□□□□ -1.57
PCDH1Q08174 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.24□□□□□ -1.57
PCDH1Q08174 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.24□□□□□ -1.57
PCDH1Q08174 CR383656.7-201ENST00000548164 174 ntBASIC5.24□□□□□ -1.57
PCDH1Q08174 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.24□□□□□ -1.57
PCDH1Q08174 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.24□□□□□ -1.57
PCDH1Q08174 AC007448.1-201ENST00000582714 234 ntBASIC5.24□□□□□ -1.57
PCDH1Q08174 AC108738.1-201ENST00000603703 237 ntBASIC5.24□□□□□ -1.57
PCDH1Q08174 CYP4F35P-202ENST00000636121 390 ntBASIC5.24□□□□□ -1.57
PCDH1Q08174 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.24□□□□□ -1.57
PCDH1Q08174 CDC27P3-201ENST00000635418 1910 ntBASIC5.24□□□□□ -1.57
PCDH1Q08174 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.24□□□□□ -1.57
PCDH1Q08174 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.24□□□□□ -1.57
PCDH1Q08174 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.24□□□□□ -1.57
PCDH1Q08174 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
PCDH1Q08174 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDH1Q08174 AC011755.1-201ENST00000623763 2049 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms