Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.81□□□□□ -2.12
TFF3Q07654 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.81□□□□□ -2.12
TFF3Q07654 AC091917.2-201ENST00000505002 744 ntBASIC1.81□□□□□ -2.12
TFF3Q07654 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.81□□□□□ -2.12
TFF3Q07654 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.81□□□□□ -2.12
TFF3Q07654 YWHAQP7-201ENST00000603536 658 ntBASIC1.81□□□□□ -2.12
TFF3Q07654 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.81□□□□□ -2.12
TFF3Q07654 AC034102.8-201ENST00000615146 484 ntBASIC1.81□□□□□ -2.12
TFF3Q07654 YWHAEP7-203ENST00000622054 312 ntBASIC1.81□□□□□ -2.12
TFF3Q07654 AC016542.2-201ENST00000624201 619 ntBASIC1.81□□□□□ -2.12
TFF3Q07654 AC092159.4-201ENST00000624944 550 ntBASIC1.81□□□□□ -2.12
TFF3Q07654 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC1.81□□□□□ -2.12
TFF3Q07654 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC1.81□□□□□ -2.12
TFF3Q07654 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC1.81□□□□□ -2.12
TFF3Q07654 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
TFF3Q07654 MIR144-201ENST00000384886 86 ntBASIC1.8□□□□□ -2.12
TFF3Q07654 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
TFF3Q07654 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.8□□□□□ -2.12
TFF3Q07654 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.8□□□□□ -2.12
TFF3Q07654 VTA1P1-201ENST00000414044 866 ntBASIC1.8□□□□□ -2.12
TFF3Q07654 TRAPPC2P10-201ENST00000415662 323 ntBASIC1.8□□□□□ -2.12
TFF3Q07654 AC005005.2-201ENST00000420779 380 ntBASIC1.8□□□□□ -2.12
TFF3Q07654 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC1.8□□□□□ -2.12
TFF3Q07654 AC099336.2-201ENST00000422457 254 ntBASIC1.8□□□□□ -2.12
TFF3Q07654 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.8□□□□□ -2.12
TFF3Q07654 RAB9AP5-201ENST00000437794 597 ntBASIC1.8□□□□□ -2.12
TFF3Q07654 HIGD1AP11-201ENST00000438361 280 ntBASIC1.8□□□□□ -2.12
TFF3Q07654 RAB9AP2-201ENST00000443911 597 ntBASIC1.8□□□□□ -2.12
TFF3Q07654 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.8□□□□□ -2.12
TFF3Q07654 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC1.8□□□□□ -2.12
TFF3Q07654 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
TFF3Q07654 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.8□□□□□ -2.12
TFF3Q07654 MTCYBP37-201ENST00000510642 1133 ntBASIC1.8□□□□□ -2.12
TFF3Q07654 SNORD116-26-201ENST00000516006 96 ntBASIC1.8□□□□□ -2.12
TFF3Q07654 AC104115.2-201ENST00000523026 687 ntBASIC1.8□□□□□ -2.12
TFF3Q07654 AK6P1-201ENST00000540219 478 ntBASIC1.8□□□□□ -2.12
TFF3Q07654 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC1.8□□□□□ -2.12
TFF3Q07654 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.8□□□□□ -2.12
TFF3Q07654 AC103810.1-201ENST00000579873 453 ntBASIC1.8□□□□□ -2.12
TFF3Q07654 LRRC37A5P-203ENST00000580181 585 ntBASIC1.8□□□□□ -2.12
TFF3Q07654 AP001521.1-201ENST00000609150 300 ntBASIC1.8□□□□□ -2.12
TFF3Q07654 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC1.8□□□□□ -2.12
TFF3Q07654 AL139811.1-201ENST00000424779 2299 ntBASIC1.8□□□□□ -2.12
TFF3Q07654 MTND4P35-201ENST00000604257 1375 ntBASIC1.8□□□□□ -2.12
TFF3Q07654 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC1.8□□□□□ -2.12
TFF3Q07654 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
TFF3Q07654 Y_RNA.140-201ENST00000363474 103 ntBASIC1.79□□□□□ -2.12
TFF3Q07654 MIR583-201ENST00000384846 75 ntBASIC1.79□□□□□ -2.12
TFF3Q07654 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
TFF3Q07654 AC240504.1-201ENST00000395709 845 ntBASIC1.79□□□□□ -2.12
TFF3Q07654 RNA5SP247-201ENST00000411181 105 ntBASIC1.79□□□□□ -2.12
TFF3Q07654 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC1.79□□□□□ -2.12
TFF3Q07654 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC1.79□□□□□ -2.12
TFF3Q07654 AL138799.3-201ENST00000438968 350 ntBASIC1.79□□□□□ -2.12
TFF3Q07654 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.79□□□□□ -2.12
TFF3Q07654 AL035551.1-201ENST00000446931 348 ntBASIC1.79□□□□□ -2.12
TFF3Q07654 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC1.79□□□□□ -2.12
TFF3Q07654 AC004263.1-201ENST00000479327 332 ntBASIC1.79□□□□□ -2.12
TFF3Q07654 AC017007.3-201ENST00000479865 435 ntBASIC1.79□□□□□ -2.12
TFF3Q07654 AIG1P1-201ENST00000503376 148 ntBASIC1.79□□□□□ -2.12
TFF3Q07654 FAM92A1P2-202ENST00000504766 877 ntBASIC1.79□□□□□ -2.12
TFF3Q07654 RNA5SP182-201ENST00000516064 82 ntBASIC1.79□□□□□ -2.12
TFF3Q07654 Y_RNA.673-201ENST00000516306 88 ntBASIC1.79□□□□□ -2.12
TFF3Q07654 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.79□□□□□ -2.12
TFF3Q07654 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC1.79□□□□□ -2.12
TFF3Q07654 ISCA1P3-201ENST00000577104 373 ntBASIC1.79□□□□□ -2.12
TFF3Q07654 AP001029.3-201ENST00000588063 596 ntBASIC1.79□□□□□ -2.12
TFF3Q07654 AC013562.2-201ENST00000611632 603 ntBASIC1.79□□□□□ -2.12
TFF3Q07654 AP000553.5-201ENST00000641933 54 ntBASIC1.79□□□□□ -2.12
TFF3Q07654 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
TFF3Q07654 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.79□□□□□ -2.12
TFF3Q07654 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC1.79□□□□□ -2.12
TFF3Q07654 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC1.78□□□□□ -2.12
TFF3Q07654 AC025125.1-201ENST00000624743 1922 ntBASIC1.78□□□□□ -2.12
TFF3Q07654 AC093909.5-201ENST00000621839 1799 ntBASIC1.78□□□□□ -2.12
TFF3Q07654 AC245100.2-201ENST00000454544 1679 ntBASIC1.78□□□□□ -2.12
TFF3Q07654 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.78□□□□□ -2.12
TFF3Q07654 Y_RNA.4-201ENST00000362333 112 ntBASIC1.78□□□□□ -2.12
TFF3Q07654 Y_RNA.338-201ENST00000365320 114 ntBASIC1.78□□□□□ -2.12
TFF3Q07654 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.78□□□□□ -2.12
TFF3Q07654 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC1.78□□□□□ -2.12
TFF3Q07654 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.78□□□□□ -2.12
TFF3Q07654 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC1.78□□□□□ -2.12
TFF3Q07654 FABP5P13-201ENST00000452144 328 ntBASIC1.78□□□□□ -2.12
TFF3Q07654 AC233279.1-201ENST00000455300 423 ntBASIC1.78□□□□□ -2.12
TFF3Q07654 RNU6-717P-201ENST00000459076 104 ntBASIC1.78□□□□□ -2.12
TFF3Q07654 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
TFF3Q07654 RPL21P131-201ENST00000497298 483 ntBASIC1.78□□□□□ -2.12
TFF3Q07654 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.78□□□□□ -2.12
TFF3Q07654 MTCO1P30-201ENST00000515244 580 ntBASIC1.78□□□□□ -2.12
TFF3Q07654 RNA5SP82-201ENST00000516707 92 ntBASIC1.78□□□□□ -2.12
TFF3Q07654 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC1.78□□□□□ -2.12
TFF3Q07654 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.78□□□□□ -2.12
TFF3Q07654 TRAV11-201ENST00000539512 339 ntBASIC1.78□□□□□ -2.12
TFF3Q07654 OR11H5P-201ENST00000554039 926 ntBASIC1.78□□□□□ -2.12
TFF3Q07654 AL163153.1-201ENST00000554223 283 ntBASIC1.78□□□□□ -2.12
TFF3Q07654 AC120053.1-201ENST00000607706 736 ntBASIC1.78□□□□□ -2.12
TFF3Q07654 AL391813.2-201ENST00000609113 322 ntBASIC1.78□□□□□ -2.12
TFF3Q07654 AC093673.2-201ENST00000609674 331 ntBASIC1.78□□□□□ -2.12
TFF3Q07654 Y_RNA.783-201ENST00000613546 102 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms