Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 SNRPGP18-201ENST00000553000 214 ntBASIC1.74□□□□□ -2.13
SSBP1Q04837 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SSBP1Q04837 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC1.74□□□□□ -2.13
SSBP1Q04837 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SSBP1Q04837 AP003122.6-201ENST00000623831 495 ntBASIC1.74□□□□□ -2.13
SSBP1Q04837 CU459211.1-201ENST00000635667 749 ntBASIC1.74□□□□□ -2.13
SSBP1Q04837 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC1.74□□□□□ -2.13
SSBP1Q04837 AL359715.4-201ENST00000606629 1436 ntBASIC1.74□□□□□ -2.13
SSBP1Q04837 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.73□□□□□ -2.13
SSBP1Q04837 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
SSBP1Q04837 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
SSBP1Q04837 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
SSBP1Q04837 RNU6-1293P-201ENST00000384077 107 ntBASIC1.73□□□□□ -2.13
SSBP1Q04837 RNU2-25P-201ENST00000411041 191 ntBASIC1.73□□□□□ -2.13
SSBP1Q04837 RNA5SP184-201ENST00000411071 108 ntBASIC1.73□□□□□ -2.13
SSBP1Q04837 HMGN2P30-201ENST00000423237 256 ntBASIC1.73□□□□□ -2.13
SSBP1Q04837 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC1.73□□□□□ -2.13
SSBP1Q04837 UBE2V1P6-201ENST00000430840 422 ntBASIC1.73□□□□□ -2.13
SSBP1Q04837 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC1.73□□□□□ -2.13
SSBP1Q04837 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC1.73□□□□□ -2.13
SSBP1Q04837 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC1.73□□□□□ -2.13
SSBP1Q04837 ELOCP13-201ENST00000443934 329 ntBASIC1.73□□□□□ -2.13
SSBP1Q04837 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.73□□□□□ -2.13
SSBP1Q04837 AC011753.1-201ENST00000451001 220 ntBASIC1.73□□□□□ -2.13
SSBP1Q04837 OR6C72P-201ENST00000451403 892 ntBASIC1.73□□□□□ -2.13
SSBP1Q04837 HMGB1P15-201ENST00000453854 435 ntBASIC1.73□□□□□ -2.13
SSBP1Q04837 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC1.73□□□□□ -2.13
SSBP1Q04837 snoU13.24-201ENST00000458998 104 ntBASIC1.73□□□□□ -2.13
SSBP1Q04837 RPS29P12-201ENST00000460178 152 ntBASIC1.73□□□□□ -2.13
SSBP1Q04837 AC022493.1-201ENST00000492984 337 ntBASIC1.73□□□□□ -2.13
SSBP1Q04837 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC1.73□□□□□ -2.13
SSBP1Q04837 AC096571.1-202ENST00000506634 735 ntBASIC1.73□□□□□ -2.13
SSBP1Q04837 HMGN1P28-201ENST00000521340 364 ntBASIC1.73□□□□□ -2.13
SSBP1Q04837 FAM92A1P1-201ENST00000528023 890 ntBASIC1.73□□□□□ -2.13
SSBP1Q04837 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC1.73□□□□□ -2.13
SSBP1Q04837 DNAJC8P1-201ENST00000554535 372 ntBASIC1.73□□□□□ -2.13
SSBP1Q04837 RPS3AP23-202ENST00000574601 686 ntBASIC1.73□□□□□ -2.13
SSBP1Q04837 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.73□□□□□ -2.13
SSBP1Q04837 MIR5195-201ENST00000583555 115 ntBASIC1.73□□□□□ -2.13
SSBP1Q04837 VN1R78P-201ENST00000597393 564 ntBASIC1.73□□□□□ -2.13
SSBP1Q04837 AL133507.1-201ENST00000605269 557 ntBASIC1.73□□□□□ -2.13
SSBP1Q04837 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.73□□□□□ -2.13
SSBP1Q04837 RNU6-156P-201ENST00000621869 107 ntBASIC1.73□□□□□ -2.13
SSBP1Q04837 AC020923.1-201ENST00000624021 917 ntBASIC1.73□□□□□ -2.13
SSBP1Q04837 AL359851.1-201ENST00000569460 4997 ntBASIC1.73□□□□□ -2.13
SSBP1Q04837 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
SSBP1Q04837 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SSBP1Q04837 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
SSBP1Q04837 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
SSBP1Q04837 AC138915.1-201ENST00000565427 1685 ntBASIC1.72□□□□□ -2.13
SSBP1Q04837 RNU6-50P-201ENST00000362356 103 ntBASIC1.72□□□□□ -2.13
SSBP1Q04837 CRP-202ENST00000368110 667 ntTSL 3 BASIC1.72□□□□□ -2.13
SSBP1Q04837 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.72□□□□□ -2.13
SSBP1Q04837 RNU4-65P-201ENST00000410473 140 ntBASIC1.72□□□□□ -2.13
SSBP1Q04837 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.72□□□□□ -2.13
SSBP1Q04837 UBE2D3P2-201ENST00000424409 445 ntBASIC1.72□□□□□ -2.13
SSBP1Q04837 USP9YP8-201ENST00000441913 500 ntBASIC1.72□□□□□ -2.13
SSBP1Q04837 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC1.72□□□□□ -2.13
SSBP1Q04837 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC1.72□□□□□ -2.13
SSBP1Q04837 RPS23P3-201ENST00000470993 430 ntBASIC1.72□□□□□ -2.13
SSBP1Q04837 DSTNP2-201ENST00000504533 515 ntBASIC1.72□□□□□ -2.13
SSBP1Q04837 AC008716.1-201ENST00000511084 513 ntBASIC1.72□□□□□ -2.13
SSBP1Q04837 VTRNA2-2P-201ENST00000516091 103 ntBASIC1.72□□□□□ -2.13
SSBP1Q04837 AC019227.1-201ENST00000526902 510 ntBASIC1.72□□□□□ -2.13
SSBP1Q04837 AP003717.3-201ENST00000544832 1180 ntBASIC1.72□□□□□ -2.13
SSBP1Q04837 NBEAP1-201ENST00000554452 979 ntBASIC1.72□□□□□ -2.13
SSBP1Q04837 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.72□□□□□ -2.13
SSBP1Q04837 AL161756.2-201ENST00000604597 246 ntBASIC1.72□□□□□ -2.13
SSBP1Q04837 AL590099.1-201ENST00000615276 138 ntBASIC1.72□□□□□ -2.13
SSBP1Q04837 AC104307.1-201ENST00000616142 196 ntBASIC1.72□□□□□ -2.13
SSBP1Q04837 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SSBP1Q04837 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC1.72□□□□□ -2.13
SSBP1Q04837 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.72□□□□□ -2.13
SSBP1Q04837 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC1.72□□□□□ -2.13
SSBP1Q04837 ZNF33BP1-201ENST00000452497 1834 ntBASIC1.72□□□□□ -2.13
SSBP1Q04837 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC1.72□□□□□ -2.13
SSBP1Q04837 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.72□□□□□ -2.13
SSBP1Q04837 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
SSBP1Q04837 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
SSBP1Q04837 AC091564.4-201ENST00000533934 2194 ntBASIC1.72□□□□□ -2.13
SSBP1Q04837 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.13
SSBP1Q04837 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
SSBP1Q04837 AL109809.4-201ENST00000603520 2185 ntBASIC1.71□□□□□ -2.14
SSBP1Q04837 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC1.71□□□□□ -2.14
SSBP1Q04837 RNU6-799P-201ENST00000363567 107 ntBASIC1.71□□□□□ -2.14
SSBP1Q04837 RNU6-1027P-201ENST00000383998 107 ntBASIC1.71□□□□□ -2.14
SSBP1Q04837 RNU6-1181P-201ENST00000384191 106 ntBASIC1.71□□□□□ -2.14
SSBP1Q04837 RNA5SP38-201ENST00000410750 119 ntBASIC1.71□□□□□ -2.14
SSBP1Q04837 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.71□□□□□ -2.14
SSBP1Q04837 SMC4P1-201ENST00000414479 527 ntBASIC1.71□□□□□ -2.14
SSBP1Q04837 Z75741.2-201ENST00000417272 1167 ntBASIC1.71□□□□□ -2.14
SSBP1Q04837 NUP35P1-201ENST00000422734 947 ntBASIC1.71□□□□□ -2.14
SSBP1Q04837 PTP4A1P3-201ENST00000433661 420 ntBASIC1.71□□□□□ -2.14
SSBP1Q04837 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC1.71□□□□□ -2.14
SSBP1Q04837 MED6P1-201ENST00000439659 713 ntBASIC1.71□□□□□ -2.14
SSBP1Q04837 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.71□□□□□ -2.14
SSBP1Q04837 AC104978.1-201ENST00000449387 391 ntBASIC1.71□□□□□ -2.14
SSBP1Q04837 RPL31P20-201ENST00000449593 360 ntBASIC1.71□□□□□ -2.14
SSBP1Q04837 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC1.71□□□□□ -2.14
SSBP1Q04837 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms