Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
HIST1H3AP68431 AC046144.1-201ENST00000478559 1853 ntBASIC2.31□□□□□ -2.04
HIST1H3AP68431 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
HIST1H3AP68431 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
HIST1H3AP68431 AC080100.1-201ENST00000624239 5356 ntBASIC2.3□□□□□ -2.04
HIST1H3AP68431 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
HIST1H3AP68431 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
HIST1H3AP68431 MIR493-201ENST00000385254 89 ntBASIC2.3□□□□□ -2.04
HIST1H3AP68431 RNU6-272P-201ENST00000411028 104 ntBASIC2.3□□□□□ -2.04
HIST1H3AP68431 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.3□□□□□ -2.04
HIST1H3AP68431 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.3□□□□□ -2.04
HIST1H3AP68431 TMEM167AP1-201ENST00000423409 219 ntBASIC2.3□□□□□ -2.04
HIST1H3AP68431 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
HIST1H3AP68431 AC005189.1-201ENST00000431286 310 ntBASIC2.3□□□□□ -2.04
HIST1H3AP68431 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.3□□□□□ -2.04
HIST1H3AP68431 AC011816.1-201ENST00000441346 546 ntBASIC2.3□□□□□ -2.04
HIST1H3AP68431 AC068135.1-201ENST00000446164 246 ntBASIC2.3□□□□□ -2.04
HIST1H3AP68431 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.3□□□□□ -2.04
HIST1H3AP68431 SNRPGP6-201ENST00000451124 220 ntBASIC2.3□□□□□ -2.04
HIST1H3AP68431 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
HIST1H3AP68431 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC2.3□□□□□ -2.04
HIST1H3AP68431 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
HIST1H3AP68431 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.3□□□□□ -2.04
HIST1H3AP68431 MTND3P24-201ENST00000506306 329 ntBASIC2.3□□□□□ -2.04
HIST1H3AP68431 CBX3P3-201ENST00000508108 532 ntBASIC2.3□□□□□ -2.04
HIST1H3AP68431 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.3□□□□□ -2.04
HIST1H3AP68431 PRELID3BP4-201ENST00000515476 571 ntBASIC2.3□□□□□ -2.04
HIST1H3AP68431 RNU6-488P-201ENST00000515918 99 ntBASIC2.3□□□□□ -2.04
HIST1H3AP68431 RNU6-889P-201ENST00000517189 103 ntBASIC2.3□□□□□ -2.04
HIST1H3AP68431 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.3□□□□□ -2.04
HIST1H3AP68431 AC123904.3-201ENST00000547218 814 ntBASIC2.3□□□□□ -2.04
HIST1H3AP68431 AC084033.1-201ENST00000550830 633 ntBASIC2.3□□□□□ -2.04
HIST1H3AP68431 CBX3P2-202ENST00000583365 535 ntBASIC2.3□□□□□ -2.04
HIST1H3AP68431 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.3□□□□□ -2.04
HIST1H3AP68431 AC106028.5-201ENST00000610332 395 ntBASIC2.3□□□□□ -2.04
HIST1H3AP68431 LINC00216-201ENST00000623548 1126 ntBASIC2.3□□□□□ -2.04
HIST1H3AP68431 AL109659.3-201ENST00000624985 950 ntBASIC2.3□□□□□ -2.04
HIST1H3AP68431 AL356118.1-201ENST00000635272 1078 ntBASIC2.3□□□□□ -2.04
HIST1H3AP68431 MTND2P41-201ENST00000637599 773 ntBASIC2.3□□□□□ -2.04
HIST1H3AP68431 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.3□□□□□ -2.04
HIST1H3AP68431 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.3□□□□□ -2.04
HIST1H3AP68431 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
HIST1H3AP68431 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
HIST1H3AP68431 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
HIST1H3AP68431 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
HIST1H3AP68431 OR5J1P-201ENST00000313544 939 ntBASIC2.29□□□□□ -2.04
HIST1H3AP68431 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.29□□□□□ -2.04
HIST1H3AP68431 RNU6-712P-201ENST00000410558 100 ntBASIC2.29□□□□□ -2.04
HIST1H3AP68431 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.29□□□□□ -2.04
HIST1H3AP68431 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.29□□□□□ -2.04
HIST1H3AP68431 RPLP0P7-201ENST00000416050 667 ntBASIC2.29□□□□□ -2.04
HIST1H3AP68431 FNDC3CP-201ENST00000420795 1155 ntBASIC2.29□□□□□ -2.04
HIST1H3AP68431 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.29□□□□□ -2.04
HIST1H3AP68431 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.29□□□□□ -2.04
HIST1H3AP68431 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.29□□□□□ -2.04
HIST1H3AP68431 AC097462.2-201ENST00000504623 481 ntBASIC2.29□□□□□ -2.04
HIST1H3AP68431 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.29□□□□□ -2.04
HIST1H3AP68431 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.29□□□□□ -2.04
HIST1H3AP68431 RN7SKP132-201ENST00000516001 208 ntBASIC2.29□□□□□ -2.04
HIST1H3AP68431 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.29□□□□□ -2.04
HIST1H3AP68431 SNORA31.21-201ENST00000517180 77 ntBASIC2.29□□□□□ -2.04
HIST1H3AP68431 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.29□□□□□ -2.04
HIST1H3AP68431 AC100870.1-201ENST00000522035 505 ntBASIC2.29□□□□□ -2.04
HIST1H3AP68431 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.29□□□□□ -2.04
HIST1H3AP68431 AP005205.1-201ENST00000563503 508 ntBASIC2.29□□□□□ -2.04
HIST1H3AP68431 HSPE1P7-201ENST00000604681 321 ntBASIC2.29□□□□□ -2.04
HIST1H3AP68431 AL137843.1-201ENST00000605078 385 ntBASIC2.29□□□□□ -2.04
HIST1H3AP68431 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.29□□□□□ -2.04
HIST1H3AP68431 AC004775.1-201ENST00000607389 753 ntBASIC2.29□□□□□ -2.04
HIST1H3AP68431 BX664608.1-201ENST00000610519 487 ntBASIC2.29□□□□□ -2.04
HIST1H3AP68431 AC135507.2-201ENST00000612443 309 ntBASIC2.29□□□□□ -2.04
HIST1H3AP68431 AC010297.1-201ENST00000623948 149 ntBASIC2.29□□□□□ -2.04
HIST1H3AP68431 AL137790.1-201ENST00000634283 177 ntBASIC2.29□□□□□ -2.04
HIST1H3AP68431 AC110079.1-202ENST00000635213 138 ntBASIC2.29□□□□□ -2.04
HIST1H3AP68431 AC244517.1-201ENST00000606030 2086 ntBASIC2.29□□□□□ -2.04
HIST1H3AP68431 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
HIST1H3AP68431 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
HIST1H3AP68431 AP000526.1-201ENST00000603308 1388 ntBASIC2.28□□□□□ -2.04
HIST1H3AP68431 RNU5D-1-201ENST00000363299 116 ntBASIC2.28□□□□□ -2.04
HIST1H3AP68431 DEFA7P-201ENST00000382676 285 ntBASIC2.28□□□□□ -2.04
HIST1H3AP68431 RNU6-821P-201ENST00000390995 107 ntBASIC2.28□□□□□ -2.04
HIST1H3AP68431 Z86062.1-201ENST00000406773 777 ntBASIC2.28□□□□□ -2.04
HIST1H3AP68431 AC092447.6-201ENST00000414578 210 ntBASIC2.28□□□□□ -2.04
HIST1H3AP68431 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.28□□□□□ -2.04
HIST1H3AP68431 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.28□□□□□ -2.04
HIST1H3AP68431 AC010881.1-201ENST00000433830 235 ntBASIC2.28□□□□□ -2.04
HIST1H3AP68431 AL590762.3-201ENST00000436372 640 ntBASIC2.28□□□□□ -2.04
HIST1H3AP68431 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.28□□□□□ -2.04
HIST1H3AP68431 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
HIST1H3AP68431 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.28□□□□□ -2.04
HIST1H3AP68431 CACYBPP2-201ENST00000453625 678 ntBASIC2.28□□□□□ -2.04
HIST1H3AP68431 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.28□□□□□ -2.04
HIST1H3AP68431 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.28□□□□□ -2.04
HIST1H3AP68431 RPS3AP14-201ENST00000483907 780 ntBASIC2.28□□□□□ -2.04
HIST1H3AP68431 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
HIST1H3AP68431 MTCO1P31-201ENST00000506355 492 ntBASIC2.28□□□□□ -2.04
HIST1H3AP68431 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.28□□□□□ -2.04
HIST1H3AP68431 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.28□□□□□ -2.04
HIST1H3AP68431 RPPH1-2P-201ENST00000516688 293 ntBASIC2.28□□□□□ -2.04
HIST1H3AP68431 RN7SKP40-201ENST00000517211 242 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms